RNA–Protein interactions for RNA: ENST00000557529.1

SHMT2-233, Transcript of serine hydroxymethyltransferase 2, humanhuman

TSL 2

Gene SHMT2, Length 1,369 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SHMT2-233ENST00000557529 PFN3P60673 137 aa12.15□□□□□ -0.46
SHMT2-233ENST00000557529 GRIK2Q13002 908 aa12.15□□□□□ -0.46
SHMT2-233ENST00000557529 FASTKQ14296 549 aaKnown RBP12.15□□□□□ -0.46
SHMT2-233ENST00000557529 ZXDCQ2QGD7 858 aaPredicted RBP12.15□□□□□ -0.46
SHMT2-233ENST00000557529 FAM83HQ6ZRV2 1179 aaPredicted RBP12.15□□□□□ -0.46
SHMT2-233ENST00000557529 THOC6Q86W42 341 aaKnown RBP12.15□□□□□ -0.46
SHMT2-233ENST00000557529 SNX32Q86XE0 403 aa12.15□□□□□ -0.46
SHMT2-233ENST00000557529 PGBD3Q8N328 593 aa12.15□□□□□ -0.46
SHMT2-233ENST00000557529 L3MBTL4Q8NA19 623 aa12.15□□□□□ -0.46
SHMT2-233ENST00000557529 OR9A1PQ8NGU1 263 aa12.15□□□□□ -0.46
SHMT2-233ENST00000557529 SHDQ96IW2 340 aa12.15□□□□□ -0.46
SHMT2-233ENST00000557529 UHRF1Q96T88 793 aaPredicted RBP12.15□□□□□ -0.46
SHMT2-233ENST00000557529 CADM1Q9BY67 442 aaKnown RBP12.15□□□□□ -0.46
SHMT2-233ENST00000557529 ZDHHC5Q9C0B5 715 aa12.15□□□□□ -0.46
SHMT2-233ENST00000557529 ATG10Q9H0Y0 220 aa12.15□□□□□ -0.46
SHMT2-233ENST00000557529 NDE1Q9NXR1 346 aa12.15□□□□□ -0.46
SHMT2-233ENST00000557529 USP36Q9P275 1121 aaKnown RBP12.15□□□□□ -0.46
SHMT2-233ENST00000557529 SNX6Q9UNH7 406 aa12.15□□□□□ -0.46
SHMT2-233ENST00000557529 SLC22A14Q9Y267 594 aa12.15□□□□□ -0.46
SHMT2-233ENST00000557529 RNF11Q9Y3C5 154 aa12.15□□□□□ -0.46
SHMT2-233ENST00000557529 PRKAB1Q9Y478 270 aa12.15□□□□□ -0.46
SHMT2-233ENST00000557529 PTGDR2Q9Y5Y4 395 aa12.15□□□□□ -0.46
SHMT2-233ENST00000557529 IFRD1O00458 451 aaPredicted RBP12.14□□□□□ -0.47
SHMT2-233ENST00000557529 MANBAO00462 879 aa12.14□□□□□ -0.47
SHMT2-233ENST00000557529 TOR1BO14657 336 aa12.14□□□□□ -0.47
SHMT2-233ENST00000557529 RGS14O43566 566 aa12.14□□□□□ -0.47
SHMT2-233ENST00000557529 SEMA4FO95754 770 aa12.14□□□□□ -0.47
SHMT2-233ENST00000557529 SLC16A8O95907 504 aa12.14□□□□□ -0.47
SHMT2-233ENST00000557529 CEACAM5P06731 702 aa12.14□□□□□ -0.47
SHMT2-233ENST00000557529 SLC35G4P0C7Q5 338 aa12.14□□□□□ -0.47
SHMT2-233ENST00000557529 EPORP19235 508 aa12.14□□□□□ -0.47
SHMT2-233ENST00000557529 HNRNPA2B1P22626 353 aaKnown RBP12.14□□□□□ -0.47
SHMT2-233ENST00000557529 ITPKAP23677 461 aa12.14□□□□□ -0.47
SHMT2-233ENST00000557529 IMPA1P29218 277 aa12.14□□□□□ -0.47
SHMT2-233ENST00000557529 OXTRP30559 389 aa12.14□□□□□ -0.47
SHMT2-233ENST00000557529 ACSL1P33121 698 aa12.14□□□□□ -0.47
SHMT2-233ENST00000557529 PGM1P36871 562 aa12.14□□□□□ -0.47
SHMT2-233ENST00000557529 ERVK-8P63133 956 aa12.14□□□□□ -0.47
SHMT2-233ENST00000557529 ZNF33BQ06732 778 aa12.14□□□□□ -0.47
SHMT2-233ENST00000557529 PCDH1Q08174 1060 aa12.14□□□□□ -0.47
SHMT2-233ENST00000557529 STX5Q13190 355 aa12.14□□□□□ -0.47
SHMT2-233ENST00000557529 NAE1Q13564 534 aa12.14□□□□□ -0.47
SHMT2-233ENST00000557529 CUL3Q13618 768 aa12.14□□□□□ -0.47
SHMT2-233ENST00000557529 PTK2BQ14289 1009 aa12.14□□□□□ -0.47
SHMT2-233ENST00000557529 GRB7Q14451 532 aa12.14□□□□□ -0.47
SHMT2-233ENST00000557529 RPS6KA2Q15349 733 aa12.14□□□□□ -0.47
SHMT2-233ENST00000557529 KIF19Q2TAC6 998 aa12.14□□□□□ -0.47
SHMT2-233ENST00000557529 SMU1Q2TAY7 513 aa12.14□□□□□ -0.47
SHMT2-233ENST00000557529 CCSMST1Q4G0I0 132 aa12.14□□□□□ -0.47
SHMT2-233ENST00000557529 ATP6AP1LQ52LC2 224 aa12.14□□□□□ -0.47
SHMT2-233ENST00000557529 PRPF38BQ5VTL8 546 aaKnown RBP12.14□□□□□ -0.47
SHMT2-233ENST00000557529 LIPJQ5W064 366 aa12.14□□□□□ -0.47
SHMT2-233ENST00000557529 CAPN13Q6MZZ7 669 aaPredicted RBP12.14□□□□□ -0.47
SHMT2-233ENST00000557529 CYB5D1Q6P9G0 228 aa12.14□□□□□ -0.47
SHMT2-233ENST00000557529 Q6ZS52 159 aa12.14□□□□□ -0.47
SHMT2-233ENST00000557529 MYLK4Q86YV6 388 aaPredicted RBP12.14□□□□□ -0.47
SHMT2-233ENST00000557529 GALNT13Q8IUC8 556 aa12.14□□□□□ -0.47
SHMT2-233ENST00000557529 DCUN1D3Q8IWE4 304 aa12.14□□□□□ -0.47
SHMT2-233ENST00000557529 ADHFE1Q8IWW8 467 aa12.14□□□□□ -0.47
SHMT2-233ENST00000557529 ZNF687Q8N1G0 1237 aa12.14□□□□□ -0.47
SHMT2-233ENST00000557529 MIER2Q8N344 545 aa12.14□□□□□ -0.47
SHMT2-233ENST00000557529 UTP4Q969X6 686 aaKnown RBP12.14□□□□□ -0.47
SHMT2-233ENST00000557529 RAD51AP1Q96B01 352 aa12.14□□□□□ -0.47
SHMT2-233ENST00000557529 PYCR2Q96C36 320 aa12.14□□□□□ -0.47
SHMT2-233ENST00000557529 SCARF2Q96GP6 870 aaPredicted RBP12.14□□□□□ -0.47
SHMT2-233ENST00000557529 PPP3R2Q96LZ3 170 aa12.14□□□□□ -0.47
SHMT2-233ENST00000557529 NELL2Q99435 816 aa12.14□□□□□ -0.47
SHMT2-233ENST00000557529 LMAN1LQ9HAT1 526 aa12.14□□□□□ -0.47
SHMT2-233ENST00000557529 TMEM45AQ9NWC5 275 aa12.14□□□□□ -0.47
SHMT2-233ENST00000557529 GPRC5BQ9NZH0 403 aa12.14□□□□□ -0.47
SHMT2-233ENST00000557529 WNT16Q9UBV4 365 aa12.14□□□□□ -0.47
SHMT2-233ENST00000557529 KLQ9UEF7 1012 aa12.14□□□□□ -0.47
SHMT2-233ENST00000557529 SLC23A2Q9UGH3 650 aa12.14□□□□□ -0.47
SHMT2-233ENST00000557529 CA14Q9ULX7 337 aa12.14□□□□□ -0.47
SHMT2-233ENST00000557529 ASF1AQ9Y294 204 aa12.14□□□□□ -0.47
SHMT2-233ENST00000557529 PCYT1BQ9Y5K3 369 aaPredicted RBP12.14□□□□□ -0.47
SHMT2-233ENST00000557529 MYO10Q9HD67 2058 aa12.14□□□□□ -0.47
SHMT2-233ENST00000557529 C5orf42Q9H799 3197 aa12.13□□□□□ -0.47
SHMT2-233ENST00000557529 KANSL1LA0AUZ9 987 aa12.13□□□□□ -0.47
SHMT2-233ENST00000557529 FFAR3O14843 346 aa12.13□□□□□ -0.47
SHMT2-233ENST00000557529 CLGNO14967 610 aa12.13□□□□□ -0.47
SHMT2-233ENST00000557529 GPR42O15529 346 aa12.13□□□□□ -0.47
SHMT2-233ENST00000557529 LATO43561 262 aa12.13□□□□□ -0.47
SHMT2-233ENST00000557529 PEX11AO75192 247 aa12.13□□□□□ -0.47
SHMT2-233ENST00000557529 ALDOCP09972 364 aaKnown RBP12.13□□□□□ -0.47
SHMT2-233ENST00000557529 ACP5P13686 325 aa12.13□□□□□ -0.47
SHMT2-233ENST00000557529 AKT2P31751 481 aa12.13□□□□□ -0.47
SHMT2-233ENST00000557529 CPOXP36551 454 aa12.13□□□□□ -0.47
SHMT2-233ENST00000557529 HSD17B2P37059 387 aa12.13□□□□□ -0.47
SHMT2-233ENST00000557529 HTR6P50406 440 aa12.13□□□□□ -0.47
SHMT2-233ENST00000557529 CCR5P51681 352 aa12.13□□□□□ -0.47
SHMT2-233ENST00000557529 IRF8Q02556 426 aa12.13□□□□□ -0.47
SHMT2-233ENST00000557529 MAD2L1Q13257 205 aaPredicted RBP12.13□□□□□ -0.47
SHMT2-233ENST00000557529 NFATC4Q14934 902 aa12.13□□□□□ -0.47
SHMT2-233ENST00000557529 ABRAXAS2Q15018 415 aa12.13□□□□□ -0.47
SHMT2-233ENST00000557529 AGKQ53H12 422 aa12.13□□□□□ -0.47
SHMT2-233ENST00000557529 PYCR3Q53H96 274 aa12.13□□□□□ -0.47
SHMT2-233ENST00000557529 TCHHL1Q5QJ38 904 aaPredicted RBP12.13□□□□□ -0.47
SHMT2-233ENST00000557529 C6orf136Q5SQH8 315 aa12.13□□□□□ -0.47
SHMT2-233ENST00000557529 FAM219BQ5XKK7 198 aa12.13□□□□□ -0.47
Retrieved 100 of 20,778 RNA–protein pairs in 29.9 ms