RNA–Protein interactions for RNA: ENST00000556971.1

ABCD4-226, Transcript of ATP binding cassette subfamily D member 4, humanhuman

TSL 3

Gene ABCD4, Length 637 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ABCD4-226ENST00000556971 NSUN2Q08J23 767 aaKnown RBP eCLIP11.45□□□□□ -0.58
ABCD4-226ENST00000556971 CUL4BQ13620 913 aa11.45□□□□□ -0.58
ABCD4-226ENST00000556971 CAMK4Q16566 473 aa11.45□□□□□ -0.58
ABCD4-226ENST00000556971 TREML4Q6UXN2 200 aa11.45□□□□□ -0.58
ABCD4-226ENST00000556971 C20orf204Q6ZNR8 217 aa11.45□□□□□ -0.58
ABCD4-226ENST00000556971 FAM83HQ6ZRV2 1179 aaPredicted RBP11.45□□□□□ -0.58
ABCD4-226ENST00000556971 BNIPLQ7Z465 357 aa11.45□□□□□ -0.58
ABCD4-226ENST00000556971 TRAPPC5Q8IUR0 188 aa11.45□□□□□ -0.58
ABCD4-226ENST00000556971 STT3BQ8TCJ2 826 aa11.45□□□□□ -0.58
ABCD4-226ENST00000556971 MIEF2Q96C03 454 aa11.45□□□□□ -0.58
ABCD4-226ENST00000556971 CELF6Q96J87 481 aaKnown RBP11.45□□□□□ -0.58
ABCD4-226ENST00000556971 ZNF354BQ96LW1 612 aa11.45□□□□□ -0.58
ABCD4-226ENST00000556971 NAA15Q9BXJ9 866 aaKnown RBP11.45□□□□□ -0.58
ABCD4-226ENST00000556971 ESRP2Q9H6T0 727 aaKnown RBP11.45□□□□□ -0.58
ABCD4-226ENST00000556971 PLSCR2Q9NRY7 297 aa11.45□□□□□ -0.58
ABCD4-226ENST00000556971 MTRF1LQ9UGC7 380 aaKnown RBP11.45□□□□□ -0.58
ABCD4-226ENST00000556971 SNRNP200O75643 2136 aaKnown RBP11.45□□□□□ -0.58
ABCD4-226ENST00000556971 PVALEFA0A1B0GWK0 134 aa11.44□□□□□ -0.58
ABCD4-226ENST00000556971 A0A1W2PQ72 361 aa11.44□□□□□ -0.58
ABCD4-226ENST00000556971 FAM170AA1A519 330 aa11.44□□□□□ -0.58
ABCD4-226ENST00000556971 RCCD1A6NED2 376 aa11.44□□□□□ -0.58
ABCD4-226ENST00000556971 BTN3A3O00478 584 aa11.44□□□□□ -0.58
ABCD4-226ENST00000556971 TMPRSS2O15393 492 aa11.44□□□□□ -0.58
ABCD4-226ENST00000556971 TCF21O43680 179 aa11.44□□□□□ -0.58
ABCD4-226ENST00000556971 SUN1O94901 812 aa11.44□□□□□ -0.58
ABCD4-226ENST00000556971 CLDN7O95471 211 aa11.44□□□□□ -0.58
ABCD4-226ENST00000556971 ZGLP1P0C6A0 271 aa11.44□□□□□ -0.58
ABCD4-226ENST00000556971 GNA15P30679 374 aa11.44□□□□□ -0.58
ABCD4-226ENST00000556971 GCGRP47871 477 aa11.44□□□□□ -0.58
ABCD4-226ENST00000556971 TAP2Q03519 686 aa11.44□□□□□ -0.58
ABCD4-226ENST00000556971 KHDC1Q4VXA5 237 aaKnown RBP11.44□□□□□ -0.58
ABCD4-226ENST00000556971 KDELC1Q6UW63 502 aa11.44□□□□□ -0.58
ABCD4-226ENST00000556971 CRLF3Q8IUI8 442 aa11.44□□□□□ -0.58
ABCD4-226ENST00000556971 OR52N2Q8NGI0 321 aa11.44□□□□□ -0.58
ABCD4-226ENST00000556971 PIH1D2Q8WWB5 315 aa11.44□□□□□ -0.58
ABCD4-226ENST00000556971 C12orf66Q96MD2 445 aa11.44□□□□□ -0.58
ABCD4-226ENST00000556971 FAM83DQ9H4H8 585 aa11.44□□□□□ -0.58
ABCD4-226ENST00000556971 NOD2Q9HC29 1040 aa11.44□□□□□ -0.58
ABCD4-226ENST00000556971 METTL14Q9HCE5 456 aaKnown RBP11.44□□□□□ -0.58
ABCD4-226ENST00000556971 EXOC1Q9NV70 894 aa11.44□□□□□ -0.58
ABCD4-226ENST00000556971 C6orf203Q9P0P8 240 aaPredicted RBP11.44□□□□□ -0.58
ABCD4-226ENST00000556971 KIAA1468Q9P260 1216 aa11.44□□□□□ -0.58
ABCD4-226ENST00000556971 MALRD1Q5VYJ5 2156 aa11.44□□□□□ -0.58
ABCD4-226ENST00000556971 GABRR3A8MPY1 467 aa11.43□□□□□ -0.58
ABCD4-226ENST00000556971 DSCR3O14972 297 aa11.43□□□□□ -0.58
ABCD4-226ENST00000556971 PDHA1P08559 390 aa11.43□□□□□ -0.58
ABCD4-226ENST00000556971 PAX1P15863 534 aa11.43□□□□□ -0.58
ABCD4-226ENST00000556971 PAPOLAP51003 745 aaKnown RBP11.43□□□□□ -0.58
ABCD4-226ENST00000556971 CASP9P55211 416 aa11.43□□□□□ -0.58
ABCD4-226ENST00000556971 MCCD1P59942 119 aaPredicted RBP11.43□□□□□ -0.58
ABCD4-226ENST00000556971 ACTG1P63261 375 aa11.43□□□□□ -0.58
ABCD4-226ENST00000556971 SORDQ00796 357 aa11.43□□□□□ -0.58
ABCD4-226ENST00000556971 NFIL3Q16649 462 aa11.43□□□□□ -0.58
ABCD4-226ENST00000556971 CDO1Q16878 200 aa11.43□□□□□ -0.58
ABCD4-226ENST00000556971 C1orf185Q5T7R7 199 aa11.43□□□□□ -0.58
ABCD4-226ENST00000556971 FAM102AQ5T9C2 384 aaPredicted RBP11.43□□□□□ -0.58
ABCD4-226ENST00000556971 RIPPLY2Q5TAB7 128 aa11.43□□□□□ -0.58
ABCD4-226ENST00000556971 ALS2CLQ60I27 953 aa11.43□□□□□ -0.58
ABCD4-226ENST00000556971 ACAD10Q6JQN1 1059 aa11.43□□□□□ -0.58
ABCD4-226ENST00000556971 LAPTM4BQ86VI4 370 aa11.43□□□□□ -0.58
ABCD4-226ENST00000556971 ARHGEF19Q8IW93 802 aa11.43□□□□□ -0.58
ABCD4-226ENST00000556971 UMODL1-AS1Q8N2C9 162 aa11.43□□□□□ -0.58
ABCD4-226ENST00000556971 PYROXD2Q8N2H3 581 aa11.43□□□□□ -0.58
ABCD4-226ENST00000556971 HORMAD2Q8N7B1 307 aa11.43□□□□□ -0.58
ABCD4-226ENST00000556971 INSM2Q96T92 566 aaPredicted RBP11.43□□□□□ -0.58
ABCD4-226ENST00000556971 NPAS2Q99743 824 aa11.43□□□□□ -0.58
ABCD4-226ENST00000556971 GTPBP4Q9BZE4 634 aaKnown RBP11.43□□□□□ -0.58
ABCD4-226ENST00000556971 DEFB127Q9H1M4 99 aa11.43□□□□□ -0.58
ABCD4-226ENST00000556971 SRMSQ9H3Y6 488 aa11.43□□□□□ -0.58
ABCD4-226ENST00000556971 LRRC19Q9H756 370 aa11.43□□□□□ -0.58
ABCD4-226ENST00000556971 SPTLC3Q9NUV7 552 aa11.43□□□□□ -0.58
ABCD4-226ENST00000556971 ZNF701Q9NV72 531 aaPredicted RBP11.43□□□□□ -0.58
ABCD4-226ENST00000556971 TMEM51Q9NW97 253 aa11.43□□□□□ -0.58
ABCD4-226ENST00000556971 PPIL1Q9Y3C6 166 aa11.43□□□□□ -0.58
ABCD4-226ENST00000556971 EPN1Q9Y6I3 576 aaPredicted RBP11.43□□□□□ -0.58
ABCD4-226ENST00000556971 KIAA1549Q9HCM3 1950 aa11.42□□□□□ -0.58
ABCD4-226ENST00000556971 QSOX1O00391 747 aa11.42□□□□□ -0.58
ABCD4-226ENST00000556971 DVL2O14641 736 aa11.42□□□□□ -0.58
ABCD4-226ENST00000556971 SHOX2O60902 331 aaPredicted RBP11.42□□□□□ -0.58
ABCD4-226ENST00000556971 TMIGD3P0DMS9 266 aaPredicted RBP11.42□□□□□ -0.58
ABCD4-226ENST00000556971 SPINT3P49223 89 aa11.42□□□□□ -0.58
ABCD4-226ENST00000556971 COMPP49747 757 aaPredicted RBP11.42□□□□□ -0.58
ABCD4-226ENST00000556971 OCA2Q04671 838 aa11.42□□□□□ -0.58
ABCD4-226ENST00000556971 NFE2L1Q14494 772 aa11.42□□□□□ -0.58
ABCD4-226ENST00000556971 VWA3BQ502W6 1294 aa11.42□□□□□ -0.58
ABCD4-226ENST00000556971 TTI2Q6NXR4 508 aa11.42□□□□□ -0.58
ABCD4-226ENST00000556971 ARHGAP36Q6ZRI8 547 aa11.42□□□□□ -0.58
ABCD4-226ENST00000556971 HOOK3Q86VS8 718 aa11.42□□□□□ -0.58
ABCD4-226ENST00000556971 GRAMD1CQ8IYS0 662 aa11.42□□□□□ -0.58
ABCD4-226ENST00000556971 CCDC185Q8N715 623 aa11.42□□□□□ -0.58
ABCD4-226ENST00000556971 POGLUT1Q8NBL1 392 aa11.42□□□□□ -0.58
ABCD4-226ENST00000556971 DACH2Q96NX9 599 aa11.42□□□□□ -0.58
ABCD4-226ENST00000556971 SPATA16Q9BXB7 569 aa11.42□□□□□ -0.58
ABCD4-226ENST00000556971 WWP1Q9H0M0 922 aa11.42□□□□□ -0.58
ABCD4-226ENST00000556971 CUTCQ9NTM9 273 aa11.42□□□□□ -0.58
ABCD4-226ENST00000556971 GTPBP10A4D1E9 387 aaKnown RBP11.41□□□□□ -0.58
ABCD4-226ENST00000556971 SH3D21A4FU49 640 aa11.41□□□□□ -0.58
ABCD4-226ENST00000556971 FAM47E-STBD1D6RA91 191 aa11.41□□□□□ -0.58
ABCD4-226ENST00000556971 UBFD1O14562 309 aaKnown RBP11.41□□□□□ -0.58
ABCD4-226ENST00000556971 SIAH2O43255 324 aa11.41□□□□□ -0.58
Retrieved 100 of 20,778 RNA–protein pairs in 51 ms