RNA–Protein interactions for RNA: ENST00000556958.5

ATXN3-245, Transcript of ataxin 3, humanhuman

TSL 1 (best)

Gene ATXN3, Length 769 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ATXN3-245ENST00000556958 IL1RAPL1Q9NZN1 696 aa5.5□□□□□ -1.53
ATXN3-245ENST00000556958 CRIM1Q9NZV1 1036 aa5.5□□□□□ -1.53
ATXN3-245ENST00000556958 DHCR7Q9UBM7 475 aaKnown RBP5.5□□□□□ -1.53
ATXN3-245ENST00000556958 POMT2Q9UKY4 750 aa5.5□□□□□ -1.53
ATXN3-245ENST00000556958 ASB1Q9Y576 335 aa5.5□□□□□ -1.53
ATXN3-245ENST00000556958 FHOD1Q9Y613 1164 aa5.5□□□□□ -1.53
ATXN3-245ENST00000556958 ALG6Q9Y672 507 aa5.5□□□□□ -1.53
ATXN3-245ENST00000556958 MDC1Q14676 2089 aaKnown RBP5.49□□□□□ -1.53
ATXN3-245ENST00000556958 SERINC4A6NH21 518 aa5.49□□□□□ -1.53
ATXN3-245ENST00000556958 ZSCAN9O15535 394 aaPredicted RBP5.49□□□□□ -1.53
ATXN3-245ENST00000556958 TLX2O43763 284 aaPredicted RBP5.49□□□□□ -1.53
ATXN3-245ENST00000556958 DNAJB6O75190 326 aa5.49□□□□□ -1.53
ATXN3-245ENST00000556958 RGS9O75916 674 aaPredicted RBP5.49□□□□□ -1.53
ATXN3-245ENST00000556958 SMNDC1O75940 238 aaKnown RBP eCLIP5.49□□□□□ -1.53
ATXN3-245ENST00000556958 PGLSO95336 258 aa5.49□□□□□ -1.53
ATXN3-245ENST00000556958 CTPS1P17812 591 aa5.49□□□□□ -1.53
ATXN3-245ENST00000556958 POLR2CP19387 275 aaPredicted RBP5.49□□□□□ -1.53
ATXN3-245ENST00000556958 HLA-DPA1P20036 260 aa5.49□□□□□ -1.53
ATXN3-245ENST00000556958 CXCR2P25025 360 aa5.49□□□□□ -1.53
ATXN3-245ENST00000556958 NDUFS1P28331 727 aa5.49□□□□□ -1.53
ATXN3-245ENST00000556958 PRDX3P30048 256 aaKnown RBP5.49□□□□□ -1.53
ATXN3-245ENST00000556958 SDC4P31431 198 aa5.49□□□□□ -1.53
ATXN3-245ENST00000556958 USP8P40818 1118 aa5.49□□□□□ -1.53
ATXN3-245ENST00000556958 GABRB2P47870 512 aa5.49□□□□□ -1.53
ATXN3-245ENST00000556958 ZFP36L2P47974 494 aaKnown RBP5.49□□□□□ -1.53
ATXN3-245ENST00000556958 PAPOLAP51003 745 aaKnown RBP5.49□□□□□ -1.53
ATXN3-245ENST00000556958 ARSFP54793 590 aa5.49□□□□□ -1.53
ATXN3-245ENST00000556958 FOXL2P58012 376 aa5.49□□□□□ -1.53
ATXN3-245ENST00000556958 IL10RBQ08334 325 aa5.49□□□□□ -1.53
ATXN3-245ENST00000556958 XRCC4Q13426 336 aa5.49□□□□□ -1.53
ATXN3-245ENST00000556958 GALNT3Q14435 633 aa5.49□□□□□ -1.53
ATXN3-245ENST00000556958 KRT33BQ14525 404 aa5.49□□□□□ -1.53
ATXN3-245ENST00000556958 SLC25A35Q3KQZ1 300 aa5.49□□□□□ -1.53
ATXN3-245ENST00000556958 KRTAP24-1Q3LI83 254 aa5.49□□□□□ -1.53
ATXN3-245ENST00000556958 ZCWPW2Q504Y3 356 aa5.49□□□□□ -1.53
ATXN3-245ENST00000556958 PDLIM3Q53GG5 364 aaPredicted RBP5.49□□□□□ -1.53
ATXN3-245ENST00000556958 ZNF569Q5MCW4 686 aa5.49□□□□□ -1.53
ATXN3-245ENST00000556958 FKBP15Q5T1M5 1219 aa5.49□□□□□ -1.53
ATXN3-245ENST00000556958 HENMT1Q5T8I9 393 aaKnown RBP5.49□□□□□ -1.53
ATXN3-245ENST00000556958 CNSTQ6PJW8 725 aa5.49□□□□□ -1.53
ATXN3-245ENST00000556958 NXPE4Q6UWF7 544 aa5.49□□□□□ -1.53
ATXN3-245ENST00000556958 SHISA2Q6UWI4 295 aa5.49□□□□□ -1.53
ATXN3-245ENST00000556958 CDHR3Q6ZTQ4 885 aa5.49□□□□□ -1.53
ATXN3-245ENST00000556958 SLFN11Q7Z7L1 901 aa5.49□□□□□ -1.53
ATXN3-245ENST00000556958 ADGRG6Q86SQ4 1221 aa5.49□□□□□ -1.53
ATXN3-245ENST00000556958 CXorf67Q86X51 503 aaPredicted RBP5.49□□□□□ -1.53
ATXN3-245ENST00000556958 SIAH3Q8IW03 269 aa5.49□□□□□ -1.53
ATXN3-245ENST00000556958 ARHGEF19Q8IW93 802 aa5.49□□□□□ -1.53
ATXN3-245ENST00000556958 GRAMD1CQ8IYS0 662 aa5.49□□□□□ -1.53
ATXN3-245ENST00000556958 MARVELD2Q8N4S9 558 aa5.49□□□□□ -1.53
ATXN3-245ENST00000556958 LINC00301Q8NCQ3 95 aa5.49□□□□□ -1.53
ATXN3-245ENST00000556958 TMEM35BQ8NCS4 154 aa5.49□□□□□ -1.53
ATXN3-245ENST00000556958 MSANTD4Q8NCY6 345 aa5.49□□□□□ -1.53
ATXN3-245ENST00000556958 OR4E2Q8NGC2 313 aa5.49□□□□□ -1.53
ATXN3-245ENST00000556958 LMO3Q8TAP4 145 aa5.49□□□□□ -1.53
ATXN3-245ENST00000556958 GPT2Q8TD30 523 aa5.49□□□□□ -1.53
ATXN3-245ENST00000556958 PIH1D2Q8WWB5 315 aa5.49□□□□□ -1.53
ATXN3-245ENST00000556958 TBRG4Q969Z0 631 aaKnown RBP eCLIP5.49□□□□□ -1.53
ATXN3-245ENST00000556958 PAGE5Q96GU1 130 aa5.49□□□□□ -1.53
ATXN3-245ENST00000556958 PPM1MQ96MI6 270 aa5.49□□□□□ -1.53
ATXN3-245ENST00000556958 KREMEN1Q96MU8 473 aa5.49□□□□□ -1.53
ATXN3-245ENST00000556958 TTC25Q96NG3 672 aa5.49□□□□□ -1.53
ATXN3-245ENST00000556958 ZNF599Q96NL3 588 aa5.49□□□□□ -1.53
ATXN3-245ENST00000556958 NUDCD1Q96RS6 583 aa5.49□□□□□ -1.53
ATXN3-245ENST00000556958 USP28Q96RU2 1077 aa5.49□□□□□ -1.53
ATXN3-245ENST00000556958 TSG101Q99816 390 aa5.49□□□□□ -1.53
ATXN3-245ENST00000556958 PDCL3Q9H2J4 239 aa5.49□□□□□ -1.53
ATXN3-245ENST00000556958 LRRC19Q9H756 370 aa5.49□□□□□ -1.53
ATXN3-245ENST00000556958 KIR3DX1Q9H7L2 352 aa5.49□□□□□ -1.53
ATXN3-245ENST00000556958 LIN7BQ9HAP6 207 aa5.49□□□□□ -1.53
ATXN3-245ENST00000556958 LRTM1Q9HBL6 345 aa5.49□□□□□ -1.53
ATXN3-245ENST00000556958 UBE2TQ9NPD8 197 aaPredicted RBP5.49□□□□□ -1.53
ATXN3-245ENST00000556958 PKD2L2Q9NZM6 624 aa5.49□□□□□ -1.53
ATXN3-245ENST00000556958 APEX2Q9UBZ4 518 aa5.49□□□□□ -1.53
ATXN3-245ENST00000556958 NEU3Q9UQ49 428 aa5.49□□□□□ -1.53
ATXN3-245ENST00000556958 WDR37Q9Y2I8 494 aa5.49□□□□□ -1.53
ATXN3-245ENST00000556958 COLEC10Q9Y6Z7 277 aa5.49□□□□□ -1.53
ATXN3-245ENST00000556958 NYNRINQ9P2P1 1898 aaKnown RBP5.49□□□□□ -1.53
ATXN3-245ENST00000556958 ANK2Q01484 3957 aa5.48□□□□□ -1.53
ATXN3-245ENST00000556958 A0A0J9YYE9 177 aa5.48□□□□□ -1.53
ATXN3-245ENST00000556958 GTPBP10A4D1E9 387 aaKnown RBP5.48□□□□□ -1.53
ATXN3-245ENST00000556958 TRIM64A6NGJ6 449 aa5.48□□□□□ -1.53
ATXN3-245ENST00000556958 TRIM64BA6NI03 449 aa5.48□□□□□ -1.53
ATXN3-245ENST00000556958 FADS2P1A8MWK0 482 aa5.48□□□□□ -1.53
ATXN3-245ENST00000556958 FAM47E-STBD1D6RA91 191 aa5.48□□□□□ -1.53
ATXN3-245ENST00000556958 SYT5O00445 386 aa5.48□□□□□ -1.53
ATXN3-245ENST00000556958 RASGRF2O14827 1237 aa5.48□□□□□ -1.53
ATXN3-245ENST00000556958 SUN1O94901 812 aa5.48□□□□□ -1.53
ATXN3-245ENST00000556958 CLDN7O95471 211 aa5.48□□□□□ -1.53
ATXN3-245ENST00000556958 CNOT4O95628 575 aaKnown RBP5.48□□□□□ -1.53
ATXN3-245ENST00000556958 ONECUT2O95948 504 aa5.48□□□□□ -1.53
ATXN3-245ENST00000556958 TRBC1P01850 177 aa5.48□□□□□ -1.53
ATXN3-245ENST00000556958 FAM157CP0CG43 387 aa5.48□□□□□ -1.53
ATXN3-245ENST00000556958 ST6GAL1P15907 406 aa5.48□□□□□ -1.53
ATXN3-245ENST00000556958 ZNF24P17028 368 aa5.48□□□□□ -1.53
ATXN3-245ENST00000556958 IL4RP24394 825 aa5.48□□□□□ -1.53
ATXN3-245ENST00000556958 HTR7P34969 479 aa5.48□□□□□ -1.53
ATXN3-245ENST00000556958 SPINT3P49223 89 aa5.48□□□□□ -1.53
ATXN3-245ENST00000556958 HSF1Q00613 529 aa5.48□□□□□ -1.53
ATXN3-245ENST00000556958 ZNF33BQ06732 778 aa5.48□□□□□ -1.53
Retrieved 100 of 20,778 RNA–protein pairs in 50.5 ms