RNA–Protein interactions for RNA: ENST00000556867.1

TDP1-216, Transcript of tyrosyl-DNA phosphodiesterase 1, humanhuman

TSL 2

Gene TDP1, Length 748 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TDP1-216ENST00000556867 FBXO38Q6PIJ6 1188 aa22.13■■□□□ 1.13
TDP1-216ENST00000556867 SPESP1Q6UW49 350 aa22.13■■□□□ 1.13
TDP1-216ENST00000556867 NEK10Q6ZWH5 1172 aa22.13■■□□□ 1.13
TDP1-216ENST00000556867 CRELD1Q96HD1 420 aa22.13■■□□□ 1.13
TDP1-216ENST00000556867 SLC30A3Q99726 388 aa22.13■■□□□ 1.13
TDP1-216ENST00000556867 PRORYQ9H606 182 aa22.13■■□□□ 1.13
TDP1-216ENST00000556867 PILRAQ9UKJ1 303 aa22.13■■□□□ 1.13
TDP1-216ENST00000556867 RUVBL2Q9Y230 463 aaKnown RBP22.13■■□□□ 1.13
TDP1-216ENST00000556867 DHRS7Q9Y394 339 aa22.13■■□□□ 1.13
TDP1-216ENST00000556867 SLC9B1P1A6NJY1 282 aa22.12■■□□□ 1.13
TDP1-216ENST00000556867 UGT2B7P16662 529 aa22.12■■□□□ 1.13
TDP1-216ENST00000556867 BDKRB1P46663 353 aa22.12■■□□□ 1.13
TDP1-216ENST00000556867 CAV1Q03135 178 aa22.12■■□□□ 1.13
TDP1-216ENST00000556867 TUBB2AQ13885 445 aa22.12■■□□□ 1.13
TDP1-216ENST00000556867 KIR2DS3Q14952 304 aa22.12■■□□□ 1.13
TDP1-216ENST00000556867 LARP7Q4G0J3 582 aaKnown RBP eCLIP22.12■■□□□ 1.13
TDP1-216ENST00000556867 TTC23LQ6PF05 361 aa22.12■■□□□ 1.13
TDP1-216ENST00000556867 ZBED8Q8IZ13 594 aa22.12■■□□□ 1.13
TDP1-216ENST00000556867 FLVCR1-AS1Q8TAF5 88 aa22.12■■□□□ 1.13
TDP1-216ENST00000556867 CD200R1Q8TD46 325 aa22.12■■□□□ 1.13
TDP1-216ENST00000556867 RAD51AP1Q96B01 352 aa22.12■■□□□ 1.13
TDP1-216ENST00000556867 OR2A14Q96R47 310 aa22.12■■□□□ 1.13
TDP1-216ENST00000556867 CCNL2Q96S94 520 aaPredicted RBP22.12■■□□□ 1.13
TDP1-216ENST00000556867 GPR21Q99679 349 aa22.12■■□□□ 1.13
TDP1-216ENST00000556867 TUBB2BQ9BVA1 445 aa22.12■■□□□ 1.13
TDP1-216ENST00000556867 RAB11FIP5Q9BXF6 653 aa22.12■■□□□ 1.13
TDP1-216ENST00000556867 PHACTR1Q9C0D0 580 aa22.12■■□□□ 1.13
TDP1-216ENST00000556867 PDE7BQ9NP56 450 aa22.12■■□□□ 1.13
TDP1-216ENST00000556867 PPANQ9NQ55 473 aaKnown RBP22.12■■□□□ 1.13
TDP1-216ENST00000556867 SOHLH2Q9NX45 425 aa22.12■■□□□ 1.13
TDP1-216ENST00000556867 SPHK1Q9NYA1 384 aa22.12■■□□□ 1.13
TDP1-216ENST00000556867 SLC17A6Q9P2U8 582 aa22.12■■□□□ 1.13
TDP1-216ENST00000556867 RASGRF2O14827 1237 aa22.11■■□□□ 1.13
TDP1-216ENST00000556867 VPS26AO75436 327 aa22.11■■□□□ 1.13
TDP1-216ENST00000556867 STK17BO94768 372 aa22.11■■□□□ 1.13
TDP1-216ENST00000556867 DLGAP3O95886 979 aa22.11■■□□□ 1.13
TDP1-216ENST00000556867 AHSGP02765 367 aa22.11■■□□□ 1.13
TDP1-216ENST00000556867 ENO3P13929 434 aaPredicted RBP22.11■■□□□ 1.13
TDP1-216ENST00000556867 ST6GAL1P15907 406 aa22.11■■□□□ 1.13
TDP1-216ENST00000556867 PEBP1P30086 187 aaKnown RBP22.11■■□□□ 1.13
TDP1-216ENST00000556867 ATP1A2P50993 1020 aa22.11■■□□□ 1.13
TDP1-216ENST00000556867 KLHL38Q2WGJ6 581 aa22.11■■□□□ 1.13
TDP1-216ENST00000556867 TMTC4Q5T4D3 741 aa22.11■■□□□ 1.13
TDP1-216ENST00000556867 C8orf74Q6P047 294 aa22.11■■□□□ 1.13
TDP1-216ENST00000556867 BPHLQ86WA6 291 aaPredicted RBP22.11■■□□□ 1.13
TDP1-216ENST00000556867 PPP1R3BQ86XI6 285 aa22.11■■□□□ 1.13
TDP1-216ENST00000556867 LINC01555Q8NAE3 123 aa22.11■■□□□ 1.13
TDP1-216ENST00000556867 OR2L8Q8NGY9 312 aa22.11■■□□□ 1.13
TDP1-216ENST00000556867 MAGEC3Q8TD91 643 aa22.11■■□□□ 1.13
TDP1-216ENST00000556867 INPP5DQ92835 1189 aa22.11■■□□□ 1.13
TDP1-216ENST00000556867 NKD1Q969G9 470 aa22.11■■□□□ 1.13
TDP1-216ENST00000556867 TRAPPC9Q96Q05 1148 aa22.11■■□□□ 1.13
TDP1-216ENST00000556867 FGF21Q9NSA1 209 aa22.11■■□□□ 1.13
TDP1-216ENST00000556867 TSR3Q9UJK0 312 aaKnown RBP22.11■■□□□ 1.13
TDP1-216ENST00000556867 RARRES3Q9UL19 164 aa22.11■■□□□ 1.13
TDP1-216ENST00000556867 RAD1O60671 282 aa22.1■■□□□ 1.13
TDP1-216ENST00000556867 PSIP1O75475 530 aaKnown RBP22.1■■□□□ 1.13
TDP1-216ENST00000556867 MSL3P1P0C860 447 aa22.1■■□□□ 1.13
TDP1-216ENST00000556867 CBSLP0DN79 551 aa22.1■■□□□ 1.13
TDP1-216ENST00000556867 CD9P21926 228 aa22.1■■□□□ 1.13
TDP1-216ENST00000556867 CBSP35520 551 aa22.1■■□□□ 1.13
TDP1-216ENST00000556867 TUBB4BP68371 445 aa22.1■■□□□ 1.13
TDP1-216ENST00000556867 MGAT5Q09328 741 aa22.1■■□□□ 1.13
TDP1-216ENST00000556867 SLC5A12Q1EHB4 618 aa22.1■■□□□ 1.13
TDP1-216ENST00000556867 OR8K5Q8NH50 307 aa22.1■■□□□ 1.13
TDP1-216ENST00000556867 IL17FQ96PD4 163 aa22.1■■□□□ 1.13
TDP1-216ENST00000556867 FCRL4Q96PJ5 515 aa22.1■■□□□ 1.13
TDP1-216ENST00000556867 NDNQ99608 321 aa22.1■■□□□ 1.13
TDP1-216ENST00000556867 ULBP3Q9BZM4 244 aa22.1■■□□□ 1.13
TDP1-216ENST00000556867 CPNE5Q9HCH3 593 aa22.1■■□□□ 1.13
TDP1-216ENST00000556867 SAYSD1Q9NPB0 183 aa22.1■■□□□ 1.13
TDP1-216ENST00000556867 MOCS1Q9NZB8 636 aa22.1■■□□□ 1.13
TDP1-216ENST00000556867 CIDEBQ9UHD4 219 aa22.1■■□□□ 1.13
TDP1-216ENST00000556867 SLC39A10Q9ULF5 831 aa22.1■■□□□ 1.13
TDP1-216ENST00000556867 CORO1CQ9ULV4 474 aaPredicted RBP22.1■■□□□ 1.13
TDP1-216ENST00000556867 NBEAQ8NFP9 2946 aa22.1■■□□□ 1.13
TDP1-216ENST00000556867 EIF3FO00303 357 aaPredicted RBP22.09■■□□□ 1.13
TDP1-216ENST00000556867 MPC1LP0DKB6 136 aa22.09■■□□□ 1.13
TDP1-216ENST00000556867 PVRP15151 417 aa22.09■■□□□ 1.13
TDP1-216ENST00000556867 PLTPP55058 493 aa22.09■■□□□ 1.13
TDP1-216ENST00000556867 TIAL1Q01085 375 aaKnown RBP eCLIP22.09■■□□□ 1.13
TDP1-216ENST00000556867 CUL1Q13616 776 aa22.09■■□□□ 1.13
TDP1-216ENST00000556867 MAP7Q14244 749 aa22.09■■□□□ 1.13
TDP1-216ENST00000556867 CCSMST1Q4G0I0 132 aa22.09■■□□□ 1.13
TDP1-216ENST00000556867 MANEAQ5SRI9 462 aa22.09■■□□□ 1.13
TDP1-216ENST00000556867 UGT3A1Q6NUS8 523 aa22.09■■□□□ 1.13
TDP1-216ENST00000556867 ZDHHC24Q6UX98 284 aa22.09■■□□□ 1.13
TDP1-216ENST00000556867 TRIM73Q86UV7 250 aa22.09■■□□□ 1.13
TDP1-216ENST00000556867 RASGRP3Q8IV61 690 aa22.09■■□□□ 1.13
TDP1-216ENST00000556867 CACNA2D3Q8IZS8 1091 aa22.09■■□□□ 1.13
TDP1-216ENST00000556867 NLGN4XQ8N0W4 816 aa22.09■■□□□ 1.13
TDP1-216ENST00000556867 MNS1Q8NEH6 495 aa22.09■■□□□ 1.13
TDP1-216ENST00000556867 NLGN4YQ8NFZ3 816 aaPredicted RBP22.09■■□□□ 1.13
TDP1-216ENST00000556867 FBXO25Q8TCJ0 367 aa22.09■■□□□ 1.13
TDP1-216ENST00000556867 PYROXD1Q8WU10 500 aa22.09■■□□□ 1.13
TDP1-216ENST00000556867 SNRNP27Q8WVK2 155 aaKnown RBP22.09■■□□□ 1.13
TDP1-216ENST00000556867 ELMO2Q96JJ3 720 aa22.09■■□□□ 1.13
TDP1-216ENST00000556867 LRRC1Q9BTT6 524 aa22.09■■□□□ 1.13
TDP1-216ENST00000556867 SYTL2Q9HCH5 934 aa22.09■■□□□ 1.13
TDP1-216ENST00000556867 FAM114A2Q9NRY5 505 aa22.09■■□□□ 1.13
Retrieved 100 of 20,778 RNA–protein pairs in 34.4 ms