RNA–Protein interactions for RNA: ENST00000556463.5

MARK3-210, Transcript of microtubule affinity regulating kinase 3, humanhuman

TSL 1 (best)

Gene MARK3, Length 3,584 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MARK3-210ENST00000556463 DNTTP04053 509 aa8.4□□□□□ -1.06
MARK3-210ENST00000556463 ZNF37AP17032 561 aaPredicted RBP8.4□□□□□ -1.06
MARK3-210ENST00000556463 HNF1BP35680 557 aa8.4□□□□□ -1.06
MARK3-210ENST00000556463 DIO3P55073 304 aa8.4□□□□□ -1.06
MARK3-210ENST00000556463 DAOAP59103 153 aa8.4□□□□□ -1.06
MARK3-210ENST00000556463 CXCL9Q07325 125 aa8.4□□□□□ -1.06
MARK3-210ENST00000556463 KIAA0040Q15053 153 aa8.4□□□□□ -1.06
MARK3-210ENST00000556463 NKG7Q16617 165 aa8.4□□□□□ -1.06
MARK3-210ENST00000556463 MEP1AQ16819 746 aa8.4□□□□□ -1.06
MARK3-210ENST00000556463 VARS2Q5ST30 1063 aaKnown RBP8.4□□□□□ -1.06
MARK3-210ENST00000556463 ARHGAP36Q6ZRI8 547 aa8.4□□□□□ -1.06
MARK3-210ENST00000556463 LYSMD2Q8IV50 215 aa8.4□□□□□ -1.06
MARK3-210ENST00000556463 FATE1Q969F0 183 aa8.4□□□□□ -1.06
MARK3-210ENST00000556463 RHBDF1Q96CC6 855 aa8.4□□□□□ -1.06
MARK3-210ENST00000556463 CAMKK2Q96RR4 588 aa8.4□□□□□ -1.06
MARK3-210ENST00000556463 SEC22CQ9BRL7 303 aa8.4□□□□□ -1.06
MARK3-210ENST00000556463 COLEC11Q9BWP8 271 aa8.4□□□□□ -1.06
MARK3-210ENST00000556463 CLPBQ9H078 707 aa8.4□□□□□ -1.06
MARK3-210ENST00000556463 LTB4R2Q9NPC1 389 aa8.4□□□□□ -1.06
MARK3-210ENST00000556463 ERVK13-1Q9NX77 482 aa8.4□□□□□ -1.06
MARK3-210ENST00000556463 TMEFF2Q9UIK5 374 aaPredicted RBP8.4□□□□□ -1.06
MARK3-210ENST00000556463 ZNF225Q9UK10 706 aa8.4□□□□□ -1.06
MARK3-210ENST00000556463 MKL2Q9ULH7 1088 aa8.4□□□□□ -1.06
MARK3-210ENST00000556463 SNX6Q9UNH7 406 aa8.4□□□□□ -1.06
MARK3-210ENST00000556463 COL1A2P08123 1366 aa8.4□□□□□ -1.07
MARK3-210ENST00000556463 DNAJC25-GNG10A0A024R161 153 aa8.4□□□□□ -1.07
MARK3-210ENST00000556463 HHLA1C9JL84 531 aa8.4□□□□□ -1.07
MARK3-210ENST00000556463 GABRDO14764 452 aa8.4□□□□□ -1.07
MARK3-210ENST00000556463 MATN3O15232 486 aa8.4□□□□□ -1.07
MARK3-210ENST00000556463 SSX4O60224 188 aa8.4□□□□□ -1.07
MARK3-210ENST00000556463 HUS1O60921 280 aa8.4□□□□□ -1.07
MARK3-210ENST00000556463 KCNK2O95069 426 aa8.4□□□□□ -1.07
MARK3-210ENST00000556463 FADS2O95864 444 aaKnown RBP8.4□□□□□ -1.07
MARK3-210ENST00000556463 PEX11BO96011 259 aa8.4□□□□□ -1.07
MARK3-210ENST00000556463 YES1P07947 543 aa8.4□□□□□ -1.07
MARK3-210ENST00000556463 ITGAMP11215 1152 aa8.4□□□□□ -1.07
MARK3-210ENST00000556463 IL1RNP18510 177 aa8.4□□□□□ -1.07
MARK3-210ENST00000556463 PAMP19021 973 aa8.4□□□□□ -1.07
MARK3-210ENST00000556463 AGXTP21549 392 aa8.4□□□□□ -1.07
MARK3-210ENST00000556463 CYP2C18P33260 490 aa8.4□□□□□ -1.07
MARK3-210ENST00000556463 YWHAHQ04917 246 aaPredicted RBP8.4□□□□□ -1.07
MARK3-210ENST00000556463 SELPLGQ14242 412 aa8.4□□□□□ -1.07
MARK3-210ENST00000556463 SPANXN2Q5MJ10 180 aa8.4□□□□□ -1.07
MARK3-210ENST00000556463 CATSPEREQ5SY80 951 aa8.4□□□□□ -1.07
MARK3-210ENST00000556463 NBPF12Q5TAG4 269 aaPredicted RBP8.4□□□□□ -1.07
MARK3-210ENST00000556463 SVOPLQ8N434 492 aa8.4□□□□□ -1.07
MARK3-210ENST00000556463 ZNF599Q96NL3 588 aa8.4□□□□□ -1.07
MARK3-210ENST00000556463 CFHR5Q9BXR6 569 aa8.4□□□□□ -1.07
MARK3-210ENST00000556463 SERHL2Q9H4I8 314 aa8.4□□□□□ -1.07
MARK3-210ENST00000556463 C12orf49Q9H741 205 aa8.4□□□□□ -1.07
MARK3-210ENST00000556463 ATP13A2Q9NQ11 1180 aa8.4□□□□□ -1.07
MARK3-210ENST00000556463 CCDC59Q9P031 241 aaKnown RBP8.4□□□□□ -1.07
MARK3-210ENST00000556463 LEF1Q9UJU2 399 aaPredicted RBP8.4□□□□□ -1.07
MARK3-210ENST00000556463 INTS6Q9UL03 887 aaKnown RBP8.4□□□□□ -1.07
MARK3-210ENST00000556463 ANKRD28O15084 1053 aa8.39□□□□□ -1.07
MARK3-210ENST00000556463 AKR7A2O43488 359 aa8.39□□□□□ -1.07
MARK3-210ENST00000556463 NBNO60934 754 aa8.39□□□□□ -1.07
MARK3-210ENST00000556463 UPK1BO75841 260 aa8.39□□□□□ -1.07
MARK3-210ENST00000556463 SOAT2O75908 522 aa8.39□□□□□ -1.07
MARK3-210ENST00000556463 MED26O95402 600 aa8.39□□□□□ -1.07
MARK3-210ENST00000556463 HGFP14210 728 aa8.39□□□□□ -1.07
MARK3-210ENST00000556463 COL9A1P20849 921 aa8.39□□□□□ -1.07
MARK3-210ENST00000556463 CXCR4P61073 352 aa8.39□□□□□ -1.07
MARK3-210ENST00000556463 CYP4F2P78329 520 aa8.39□□□□□ -1.07
MARK3-210ENST00000556463 SLC35A2P78381 396 aa8.39□□□□□ -1.07
MARK3-210ENST00000556463 CYP4F3Q08477 520 aa8.39□□□□□ -1.07
MARK3-210ENST00000556463 SMARCB1Q12824 385 aa8.39□□□□□ -1.07
MARK3-210ENST00000556463 POU4F3Q15319 338 aa8.39□□□□□ -1.07
MARK3-210ENST00000556463 STEAP3Q658P3 488 aa8.39□□□□□ -1.07
MARK3-210ENST00000556463 LAIR1Q6GTX8 287 aa8.39□□□□□ -1.07
MARK3-210ENST00000556463 ZNF549Q6P9A3 640 aa8.39□□□□□ -1.07
MARK3-210ENST00000556463 ZFAND4Q86XD8 727 aa8.39□□□□□ -1.07
MARK3-210ENST00000556463 ZBTB44Q8NCP5 570 aa8.39□□□□□ -1.07
MARK3-210ENST00000556463 B3GALNT2Q8NCR0 500 aa8.39□□□□□ -1.07
MARK3-210ENST00000556463 DNAJB14Q8TBM8 379 aa8.39□□□□□ -1.07
MARK3-210ENST00000556463 PROKR1Q8TCW9 393 aa8.39□□□□□ -1.07
MARK3-210ENST00000556463 EXT2Q93063 718 aa8.39□□□□□ -1.07
MARK3-210ENST00000556463 MTERF3Q96E29 417 aa8.39□□□□□ -1.07
MARK3-210ENST00000556463 PDLIM5Q96HC4 596 aaKnown RBP8.39□□□□□ -1.07
MARK3-210ENST00000556463 EGLN2Q96KS0 407 aa8.39□□□□□ -1.07
MARK3-210ENST00000556463 TMEM74Q96NL1 305 aa8.39□□□□□ -1.07
MARK3-210ENST00000556463 NODALQ96S42 347 aa8.39□□□□□ -1.07
MARK3-210ENST00000556463 NUSAP1Q9BXS6 441 aaKnown RBP8.39□□□□□ -1.07
MARK3-210ENST00000556463 MFSD1Q9H3U5 465 aa8.39□□□□□ -1.07
MARK3-210ENST00000556463 INTS7Q9NVH2 962 aaKnown RBP8.39□□□□□ -1.07
MARK3-210ENST00000556463 A3GALT2U3KPV4 340 aa8.39□□□□□ -1.07
MARK3-210ENST00000556463 YJEFN3A6XGL0 299 aa8.39□□□□□ -1.07
MARK3-210ENST00000556463 H3BMM5 538 aa8.39□□□□□ -1.07
MARK3-210ENST00000556463 SGTAO43765 313 aa8.39□□□□□ -1.07
MARK3-210ENST00000556463 TBC1D4O60343 1298 aa8.39□□□□□ -1.07
MARK3-210ENST00000556463 RPS17P08708 135 aaKnown RBP8.39□□□□□ -1.07
MARK3-210ENST00000556463 CYP4B1P13584 511 aa8.39□□□□□ -1.07
MARK3-210ENST00000556463 CTRB1P17538 263 aa8.39□□□□□ -1.07
MARK3-210ENST00000556463 TGFBR2P37173 567 aa8.39□□□□□ -1.07
MARK3-210ENST00000556463 CHRNA4P43681 627 aa8.39□□□□□ -1.07
MARK3-210ENST00000556463 GEMP55040 296 aa8.39□□□□□ -1.07
MARK3-210ENST00000556463 MLLT6P55198 1093 aaPredicted RBP8.39□□□□□ -1.07
MARK3-210ENST00000556463 NFYCQ13952 458 aa8.39□□□□□ -1.07
MARK3-210ENST00000556463 OR4D1Q15615 310 aa8.39□□□□□ -1.07
MARK3-210ENST00000556463 C5orf22Q49AR2 442 aa8.39□□□□□ -1.07
Retrieved 100 of 20,778 RNA–protein pairs in 47.1 ms