RNA–Protein interactions for RNA: ENST00000556433.5

ACTN1-220, Transcript of actinin alpha 1, humanhuman

TSL 3

Gene ACTN1, Length 1,259 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ACTN1-220ENST00000556433 G3BP2Q9UN86 482 aaKnown RBP21.8■■□□□ 1.08
ACTN1-220ENST00000556433 ZNF451Q9Y4E5 1061 aa21.8■■□□□ 1.08
ACTN1-220ENST00000556433 TNRC6AQ8NDV7 1962 aaKnown RBP21.79■■□□□ 1.08
ACTN1-220ENST00000556433 FLNCQ14315 2725 aa21.79■■□□□ 1.08
ACTN1-220ENST00000556433 CLEC18AA5D8T8 446 aa21.79■■□□□ 1.08
ACTN1-220ENST00000556433 IQCF5A8MTL0 148 aa21.79■■□□□ 1.08
ACTN1-220ENST00000556433 H3BMH7 237 aa21.79■■□□□ 1.08
ACTN1-220ENST00000556433 KRT86O43790 486 aa21.79■■□□□ 1.08
ACTN1-220ENST00000556433 CTSBP07858 339 aa21.79■■□□□ 1.08
ACTN1-220ENST00000556433 ATXN8OSP0DMR3 200 aa21.79■■□□□ 1.08
ACTN1-220ENST00000556433 RPL22P35268 128 aaKnown RBP21.79■■□□□ 1.08
ACTN1-220ENST00000556433 SRSF1Q07955 248 aaKnown RBP eCLIP21.79■■□□□ 1.08
ACTN1-220ENST00000556433 RPS6KA1Q15418 735 aa21.79■■□□□ 1.08
ACTN1-220ENST00000556433 SLC5A12Q1EHB4 618 aa21.79■■□□□ 1.08
ACTN1-220ENST00000556433 CLEC18BQ6UXF7 455 aa21.79■■□□□ 1.08
ACTN1-220ENST00000556433 LDB1Q86U70 411 aaPredicted RBP21.79■■□□□ 1.08
ACTN1-220ENST00000556433 RAB43Q86YS6 212 aa21.79■■□□□ 1.08
ACTN1-220ENST00000556433 VRK3Q8IV63 474 aa21.79■■□□□ 1.08
ACTN1-220ENST00000556433 SLC22A15Q8IZD6 547 aa21.79■■□□□ 1.08
ACTN1-220ENST00000556433 DNAJC22Q8N4W6 341 aa21.79■■□□□ 1.08
ACTN1-220ENST00000556433 EFCAB3Q8N7B9 438 aa21.79■■□□□ 1.08
ACTN1-220ENST00000556433 CLEC18CQ8NCF0 446 aa21.79■■□□□ 1.08
ACTN1-220ENST00000556433 FDCSPQ8NFU4 85 aa21.79■■□□□ 1.08
ACTN1-220ENST00000556433 CFAP61Q8NHU2 1237 aa21.79■■□□□ 1.08
ACTN1-220ENST00000556433 ASZ1Q8WWH4 475 aa21.79■■□□□ 1.08
ACTN1-220ENST00000556433 PEX13Q92968 403 aa21.79■■□□□ 1.08
ACTN1-220ENST00000556433 SGSM3Q96HU1 749 aa21.79■■□□□ 1.08
ACTN1-220ENST00000556433 C17orf62Q9BQA9 187 aa21.79■■□□□ 1.08
ACTN1-220ENST00000556433 CHRAC1Q9NRG0 131 aa21.79■■□□□ 1.08
ACTN1-220ENST00000556433 IRAK4Q9NWZ3 460 aa21.79■■□□□ 1.08
ACTN1-220ENST00000556433 GPN3Q9UHW5 284 aaPredicted RBP21.79■■□□□ 1.08
ACTN1-220ENST00000556433 PCDHGB7Q9Y5F8 929 aa21.79■■□□□ 1.08
ACTN1-220ENST00000556433 GOLGA6L6A8MZA4 724 aa21.78■■□□□ 1.08
ACTN1-220ENST00000556433 GPC4O75487 556 aa21.78■■□□□ 1.08
ACTN1-220ENST00000556433 PEBP1P30086 187 aaKnown RBP21.78■■□□□ 1.08
ACTN1-220ENST00000556433 OTX2P32243 289 aa21.78■■□□□ 1.08
ACTN1-220ENST00000556433 RAB28P51157 221 aa21.78■■□□□ 1.08
ACTN1-220ENST00000556433 RRADP55042 308 aa21.78■■□□□ 1.08
ACTN1-220ENST00000556433 ATP1A4Q13733 1029 aa21.78■■□□□ 1.08
ACTN1-220ENST00000556433 KYNUQ16719 465 aa21.78■■□□□ 1.08
ACTN1-220ENST00000556433 AARS2Q5JTZ9 985 aaKnown RBP21.78■■□□□ 1.08
ACTN1-220ENST00000556433 PCID2Q5JVF3 399 aa21.78■■□□□ 1.08
ACTN1-220ENST00000556433 RHBDD2Q6NTF9 364 aa21.78■■□□□ 1.08
ACTN1-220ENST00000556433 FAM20CQ8IXL6 584 aa21.78■■□□□ 1.08
ACTN1-220ENST00000556433 FAM26EQ8N5C1 309 aa21.78■■□□□ 1.08
ACTN1-220ENST00000556433 ZNF655Q8N720 491 aaPredicted RBP21.78■■□□□ 1.08
ACTN1-220ENST00000556433 CPT1CQ8TCG5 803 aa21.78■■□□□ 1.08
ACTN1-220ENST00000556433 LKAAEAR1Q8TD35 194 aa21.78■■□□□ 1.08
ACTN1-220ENST00000556433 CATSPERZQ9NTU4 200 aa21.78■■□□□ 1.08
ACTN1-220ENST00000556433 PLCL2Q9UPR0 1127 aa21.78■■□□□ 1.08
ACTN1-220ENST00000556433 CDYLQ9Y232 598 aa21.78■■□□□ 1.08
ACTN1-220ENST00000556433 ZSCAN9O15535 394 aaPredicted RBP21.77■■□□□ 1.08
ACTN1-220ENST00000556433 VPS4BO75351 444 aa21.77■■□□□ 1.08
ACTN1-220ENST00000556433 KLF7O75840 302 aaPredicted RBP21.77■■□□□ 1.08
ACTN1-220ENST00000556433 APOA4P06727 396 aa21.77■■□□□ 1.08
ACTN1-220ENST00000556433 PKLRP30613 574 aa21.77■■□□□ 1.08
ACTN1-220ENST00000556433 SESN2P58004 480 aaPredicted RBP21.77■■□□□ 1.08
ACTN1-220ENST00000556433 DCDP81605 110 aaKnown RBP21.77■■□□□ 1.08
ACTN1-220ENST00000556433 SSPNQ14714 243 aa21.77■■□□□ 1.08
ACTN1-220ENST00000556433 CCNG2Q16589 344 aa21.77■■□□□ 1.08
ACTN1-220ENST00000556433 MEI1Q5TIA1 1274 aa21.77■■□□□ 1.08
ACTN1-220ENST00000556433 TLDC1Q6P9B6 456 aa21.77■■□□□ 1.08
ACTN1-220ENST00000556433 KRT222Q8N1A0 295 aa21.77■■□□□ 1.08
ACTN1-220ENST00000556433 C2orf73Q8N5S3 287 aaPredicted RBP21.77■■□□□ 1.08
ACTN1-220ENST00000556433 PROKR1Q8TCW9 393 aa21.77■■□□□ 1.08
ACTN1-220ENST00000556433 GBP5Q96PP8 586 aa21.77■■□□□ 1.08
ACTN1-220ENST00000556433 NUDT9Q9BW91 350 aa21.77■■□□□ 1.08
ACTN1-220ENST00000556433 TXLNGQ9NUQ3 528 aa21.77■■□□□ 1.08
ACTN1-220ENST00000556433 MARCH4Q9P2E8 410 aaPredicted RBP21.77■■□□□ 1.08
ACTN1-220ENST00000556433 IFT80Q9P2H3 777 aaPredicted RBP21.77■■□□□ 1.08
ACTN1-220ENST00000556433 DHCR7Q9UBM7 475 aaKnown RBP21.77■■□□□ 1.08
ACTN1-220ENST00000556433 CIDEBQ9UHD4 219 aa21.77■■□□□ 1.08
ACTN1-220ENST00000556433 VPS4AQ9UN37 437 aa21.77■■□□□ 1.08
ACTN1-220ENST00000556433 KLHL20Q9Y2M5 609 aa21.77■■□□□ 1.08
ACTN1-220ENST00000556433 PTRH2Q9Y3E5 179 aaKnown RBP21.77■■□□□ 1.08
ACTN1-220ENST00000556433 PRMT5O14744 637 aaPredicted RBP21.76■■□□□ 1.07
ACTN1-220ENST00000556433 CD3EAPO15446 510 aaKnown RBP21.76■■□□□ 1.07
ACTN1-220ENST00000556433 RPN2P04844 631 aa21.76■■□□□ 1.07
ACTN1-220ENST00000556433 CD9P21926 228 aa21.76■■□□□ 1.07
ACTN1-220ENST00000556433 PTRHD1Q6GMV3 140 aaKnown RBP21.76■■□□□ 1.07
ACTN1-220ENST00000556433 LMNTD1Q8N9Z9 388 aa21.76■■□□□ 1.07
ACTN1-220ENST00000556433 IL17FQ96PD4 163 aa21.76■■□□□ 1.07
ACTN1-220ENST00000556433 NDC1Q9BTX1 674 aa21.76■■□□□ 1.07
ACTN1-220ENST00000556433 GPR83Q9NYM4 423 aa21.76■■□□□ 1.07
ACTN1-220ENST00000556433 NDOR1Q9UHB4 597 aa21.76■■□□□ 1.07
ACTN1-220ENST00000556433 SRPK3Q9UPE1 567 aa21.76■■□□□ 1.07
ACTN1-220ENST00000556433 DRG1Q9Y295 367 aaKnown RBP21.76■■□□□ 1.07
ACTN1-220ENST00000556433 DPM1O60762 260 aa21.75■■□□□ 1.07
ACTN1-220ENST00000556433 CD63P08962 238 aa21.75■■□□□ 1.07
ACTN1-220ENST00000556433 AOAHP28039 575 aa21.75■■□□□ 1.07
ACTN1-220ENST00000556433 FOLR3P41439 243 aa21.75■■□□□ 1.07
ACTN1-220ENST00000556433 TTPAP49638 278 aa21.75■■□□□ 1.07
ACTN1-220ENST00000556433 CRADDP78560 199 aa21.75■■□□□ 1.07
ACTN1-220ENST00000556433 SLC9A5Q14940 896 aa21.75■■□□□ 1.07
ACTN1-220ENST00000556433 TMED2Q15363 201 aa21.75■■□□□ 1.07
ACTN1-220ENST00000556433 SIX1Q15475 284 aaPredicted RBP21.75■■□□□ 1.07
ACTN1-220ENST00000556433 UNC5DQ6UXZ4 953 aa21.75■■□□□ 1.07
ACTN1-220ENST00000556433 DCUN1D3Q8IWE4 304 aa21.75■■□□□ 1.07
ACTN1-220ENST00000556433 LINC01555Q8NAE3 123 aa21.75■■□□□ 1.07
ACTN1-220ENST00000556433 SLC22A18Q96BI1 424 aa21.75■■□□□ 1.07
Retrieved 100 of 20,778 RNA–protein pairs in 19.8 ms