RNA–Protein interactions for RNA: ENST00000556256.1

SCFD1-218, Transcript of sec1 family domain containing 1, humanhuman

TSL 2

Gene SCFD1, Length 428 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCFD1-218ENST00000556256 PHF21AQ96BD5 680 aa2.77□□□□□ -1.97
SCFD1-218ENST00000556256 DGAT2Q96PD7 388 aa2.77□□□□□ -1.97
SCFD1-218ENST00000556256 SMC6Q96SB8 1091 aa2.77□□□□□ -1.97
SCFD1-218ENST00000556256 SEMA3CQ99985 751 aa2.77□□□□□ -1.97
SCFD1-218ENST00000556256 KLHL4Q9C0H6 718 aa2.77□□□□□ -1.97
SCFD1-218ENST00000556256 SPATC1LQ9H0A9 340 aa2.77□□□□□ -1.97
SCFD1-218ENST00000556256 KLHL9Q9P2J3 617 aa2.77□□□□□ -1.97
SCFD1-218ENST00000556256 HACL1Q9UJ83 578 aa2.77□□□□□ -1.97
SCFD1-218ENST00000556256 MOB4Q9Y3A3 225 aa2.77□□□□□ -1.97
SCFD1-218ENST00000556256 PRAG1Q86YV5 1406 aa2.76□□□□□ -1.97
SCFD1-218ENST00000556256 A0A087WW49 117 aa2.76□□□□□ -1.97
SCFD1-218ENST00000556256 TCRBV21S2A2A0A5A6 115 aa2.76□□□□□ -1.97
SCFD1-218ENST00000556256 H0YIN7 160 aa2.76□□□□□ -1.97
SCFD1-218ENST00000556256 TMEM189-UBE2V1I3L0A0 370 aa2.76□□□□□ -1.97
SCFD1-218ENST00000556256 SYNCRIPO60506 623 aaKnown RBP2.76□□□□□ -1.97
SCFD1-218ENST00000556256 TOMM70O94826 608 aa2.76□□□□□ -1.97
SCFD1-218ENST00000556256 CAPN2P17655 700 aa2.76□□□□□ -1.97
SCFD1-218ENST00000556256 MCCP23508 829 aa2.76□□□□□ -1.97
SCFD1-218ENST00000556256 WNT5AP41221 380 aa2.76□□□□□ -1.97
SCFD1-218ENST00000556256 LIG4P49917 911 aa2.76□□□□□ -1.97
SCFD1-218ENST00000556256 PPP5CP53041 499 aa2.76□□□□□ -1.97
SCFD1-218ENST00000556256 PPP2R2BQ00005 443 aa2.76□□□□□ -1.97
SCFD1-218ENST00000556256 UBE2V1Q13404 147 aa2.76□□□□□ -1.97
SCFD1-218ENST00000556256 RAPSNQ13702 412 aa2.76□□□□□ -1.97
SCFD1-218ENST00000556256 KYNUQ16719 465 aa2.76□□□□□ -1.97
SCFD1-218ENST00000556256 GTDC1Q4AE62 458 aa2.76□□□□□ -1.97
SCFD1-218ENST00000556256 FAM98BQ52LJ0 330 aaKnown RBP2.76□□□□□ -1.97
SCFD1-218ENST00000556256 IGSF11Q5DX21 431 aa2.76□□□□□ -1.97
SCFD1-218ENST00000556256 TEX38Q6PEX7 206 aa2.76□□□□□ -1.97
SCFD1-218ENST00000556256 TMCO3Q6UWJ1 677 aa2.76□□□□□ -1.97
SCFD1-218ENST00000556256 PLPPR4Q7Z2D5 763 aa2.76□□□□□ -1.97
SCFD1-218ENST00000556256 TDRD5Q8NAT2 981 aaKnown RBP2.76□□□□□ -1.97
SCFD1-218ENST00000556256 POGLUT1Q8NBL1 392 aa2.76□□□□□ -1.97
SCFD1-218ENST00000556256 KCTD6Q8NC69 237 aa2.76□□□□□ -1.97
SCFD1-218ENST00000556256 OR10S1Q8NGN2 331 aa2.76□□□□□ -1.97
SCFD1-218ENST00000556256 OR2L2Q8NH16 312 aa2.76□□□□□ -1.97
SCFD1-218ENST00000556256 LPGAT1Q92604 370 aa2.76□□□□□ -1.97
SCFD1-218ENST00000556256 ARSGQ96EG1 525 aa2.76□□□□□ -1.97
SCFD1-218ENST00000556256 CDRT15Q96T59 188 aa2.76□□□□□ -1.97
SCFD1-218ENST00000556256 APOL6Q9BWW8 343 aa2.76□□□□□ -1.97
SCFD1-218ENST00000556256 TRPC7Q9HCX4 862 aa2.76□□□□□ -1.97
SCFD1-218ENST00000556256 SLC35C2Q9NQQ7 365 aa2.76□□□□□ -1.97
SCFD1-218ENST00000556256 TAS2R14Q9NYV8 317 aa2.76□□□□□ -1.97
SCFD1-218ENST00000556256 CPSF2Q9P2I0 782 aaKnown RBP2.76□□□□□ -1.97
SCFD1-218ENST00000556256 NFKBIL1Q9UBC1 381 aaPredicted RBP2.76□□□□□ -1.97
SCFD1-218ENST00000556256 CLIP2Q9UDT6 1046 aa2.76□□□□□ -1.97
SCFD1-218ENST00000556256 MAN1B1Q9UKM7 699 aa2.76□□□□□ -1.97
SCFD1-218ENST00000556256 PCDHGA5Q9Y5G8 931 aa2.76□□□□□ -1.97
SCFD1-218ENST00000556256 IGKV6D-21A0A0A0MT36 114 aa2.75□□□□□ -1.97
SCFD1-218ENST00000556256 A0A0G2JNG1 304 aa2.75□□□□□ -1.97
SCFD1-218ENST00000556256 hCG_1809904A0A1W2PP81 198 aa2.75□□□□□ -1.97
SCFD1-218ENST00000556256 A0A1W2PPE2 198 aa2.75□□□□□ -1.97
SCFD1-218ENST00000556256 A0A1W2PR64 198 aa2.75□□□□□ -1.97
SCFD1-218ENST00000556256 FEZF1A0PJY2 475 aa2.75□□□□□ -1.97
SCFD1-218ENST00000556256 HEPACAM2A8MVW5 462 aa2.75□□□□□ -1.97
SCFD1-218ENST00000556256 PLK4O00444 970 aa2.75□□□□□ -1.97
SCFD1-218ENST00000556256 TO15178 435 aa2.75□□□□□ -1.97
SCFD1-218ENST00000556256 NGFP01138 241 aa2.75□□□□□ -1.97
SCFD1-218ENST00000556256 TRIM49P0CI25 452 aa2.75□□□□□ -1.97
SCFD1-218ENST00000556256 TRIM49CP0CI26 452 aa2.75□□□□□ -1.97
SCFD1-218ENST00000556256 LIFP15018 202 aa2.75□□□□□ -1.97
SCFD1-218ENST00000556256 LMAN1P49257 510 aa2.75□□□□□ -1.97
SCFD1-218ENST00000556256 CALD1Q05682 793 aaKnown RBP2.75□□□□□ -1.97
SCFD1-218ENST00000556256 AIMP1Q12904 312 aaKnown RBP2.75□□□□□ -1.97
SCFD1-218ENST00000556256 SNTB1Q13884 538 aaKnown RBP2.75□□□□□ -1.97
SCFD1-218ENST00000556256 IL11RAQ14626 422 aa2.75□□□□□ -1.97
SCFD1-218ENST00000556256 MELKQ14680 651 aa2.75□□□□□ -1.97
SCFD1-218ENST00000556256 KIR2DS5Q14953 304 aa2.75□□□□□ -1.97
SCFD1-218ENST00000556256 RASA2Q15283 850 aa2.75□□□□□ -1.97
SCFD1-218ENST00000556256 CRY2Q49AN0 593 aa2.75□□□□□ -1.97
SCFD1-218ENST00000556256 LONP2Q86WA8 852 aa2.75□□□□□ -1.97
SCFD1-218ENST00000556256 KRTAP11-1Q8IUC1 163 aa2.75□□□□□ -1.97
SCFD1-218ENST00000556256 SLC34A3Q8N130 599 aa2.75□□□□□ -1.97
SCFD1-218ENST00000556256 C1orf52Q8N6N3 182 aaKnown RBP2.75□□□□□ -1.97
SCFD1-218ENST00000556256 POMGNT2Q8NAT1 580 aa2.75□□□□□ -1.97
SCFD1-218ENST00000556256 CCDC191Q8NCU4 936 aa2.75□□□□□ -1.97
SCFD1-218ENST00000556256 APPL2Q8NEU8 664 aa2.75□□□□□ -1.97
SCFD1-218ENST00000556256 RDM1Q8NG50 284 aa2.75□□□□□ -1.97
SCFD1-218ENST00000556256 TBC1D16Q8TBP0 767 aa2.75□□□□□ -1.97
SCFD1-218ENST00000556256 ERLEC1Q96DZ1 483 aa2.75□□□□□ -1.97
SCFD1-218ENST00000556256 PGAP3Q96FM1 320 aaPredicted RBP2.75□□□□□ -1.97
SCFD1-218ENST00000556256 PRMT6Q96LA8 375 aaPredicted RBP2.75□□□□□ -1.97
SCFD1-218ENST00000556256 NEK1Q96PY6 1258 aa2.75□□□□□ -1.97
SCFD1-218ENST00000556256 RTP3Q9BQQ7 232 aa2.75□□□□□ -1.97
SCFD1-218ENST00000556256 C16orf70Q9BSU1 422 aa2.75□□□□□ -1.97
SCFD1-218ENST00000556256 GPR88Q9GZN0 384 aa2.75□□□□□ -1.97
SCFD1-218ENST00000556256 MBNL1Q9NR56 388 aaKnown RBP2.75□□□□□ -1.97
SCFD1-218ENST00000556256 C5AR2Q9P296 337 aa2.75□□□□□ -1.97
SCFD1-218ENST00000556256 EPHA6Q9UF33 1036 aa2.75□□□□□ -1.97
SCFD1-218ENST00000556256 TRPV2Q9Y5S1 764 aa2.75□□□□□ -1.97
SCFD1-218ENST00000556256 A8MXE2 369 aa2.74□□□□□ -1.97
SCFD1-218ENST00000556256 ANKRD66B4E2M5 251 aa2.74□□□□□ -1.97
SCFD1-218ENST00000556256 BUD23O43709 281 aaKnown RBP2.74□□□□□ -1.97
SCFD1-218ENST00000556256 OR10H2O60403 315 aa2.74□□□□□ -1.97
SCFD1-218ENST00000556256 DKC1O60832 514 aaKnown RBP eCLIP2.74□□□□□ -1.97
SCFD1-218ENST00000556256 TBX10O75333 385 aa2.74□□□□□ -1.97
SCFD1-218ENST00000556256 TRMUO75648 421 aaKnown RBP2.74□□□□□ -1.97
SCFD1-218ENST00000556256 PSMD10O75832 226 aa2.74□□□□□ -1.97
SCFD1-218ENST00000556256 GCNT3O95395 438 aa2.74□□□□□ -1.97
SCFD1-218ENST00000556256 DUS4LO95620 317 aaKnown RBP2.74□□□□□ -1.97
Retrieved 100 of 20,778 RNA–protein pairs in 26.3 ms