RNA–Protein interactions for RNA: ENST00000556083.1

ACTN1-216, Transcript of actinin alpha 1, humanhuman

TSL 1 (best)

Gene ACTN1, Length 4,674 nt, Biotype retained intron, Subcellular localisation Nucleus .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ACTN1-216ENST00000556083 PPM1MQ96MI6 270 aa10.52□□□□□ -0.73
ACTN1-216ENST00000556083 TRNT1Q96Q11 434 aaKnown RBP10.52□□□□□ -0.73
ACTN1-216ENST00000556083 NMUR2Q9GZQ4 415 aa10.52□□□□□ -0.73
ACTN1-216ENST00000556083 VRTNQ9H8Y1 702 aa10.52□□□□□ -0.73
ACTN1-216ENST00000556083 TCF7L1Q9HCS4 588 aa10.52□□□□□ -0.73
ACTN1-216ENST00000556083 XPNPEP1Q9NQW7 623 aa10.52□□□□□ -0.73
ACTN1-216ENST00000556083 TMEM184CQ9NVA4 438 aa10.52□□□□□ -0.73
ACTN1-216ENST00000556083 FLRT1Q9NZU1 646 aa10.52□□□□□ -0.73
ACTN1-216ENST00000556083 OAS3Q9Y6K5 1087 aaKnown RBP10.52□□□□□ -0.73
ACTN1-216ENST00000556083 SPEF2Q9C093 1822 aa10.52□□□□□ -0.73
ACTN1-216ENST00000556083 OR14I1A6ND48 311 aa10.52□□□□□ -0.73
ACTN1-216ENST00000556083 SCAMP3O14828 347 aaKnown RBP10.52□□□□□ -0.73
ACTN1-216ENST00000556083 FFAR2O15552 330 aa10.52□□□□□ -0.73
ACTN1-216ENST00000556083 PCCBP05166 539 aa10.52□□□□□ -0.73
ACTN1-216ENST00000556083 KLK3P07288 261 aaPredicted RBP10.52□□□□□ -0.73
ACTN1-216ENST00000556083 FAM214AQ32MH5 1076 aa10.52□□□□□ -0.73
ACTN1-216ENST00000556083 MINDY4Q4G0A6 757 aa10.52□□□□□ -0.73
ACTN1-216ENST00000556083 PRAMEF14Q5SWL7 426 aa10.52□□□□□ -0.73
ACTN1-216ENST00000556083 PRAMEF13Q5VWM6 474 aa10.52□□□□□ -0.73
ACTN1-216ENST00000556083 RTL10Q7L3V2 364 aa10.52□□□□□ -0.73
ACTN1-216ENST00000556083 ZDHHC21Q8IVQ6 265 aa10.52□□□□□ -0.73
ACTN1-216ENST00000556083 ZDHHC14Q8IZN3 488 aa10.52□□□□□ -0.73
ACTN1-216ENST00000556083 ARL14EPQ8N8R7 260 aaPredicted RBP10.52□□□□□ -0.73
ACTN1-216ENST00000556083 DBF4BQ8NFT6 615 aa10.52□□□□□ -0.73
ACTN1-216ENST00000556083 OR7D4Q8NG98 312 aa10.52□□□□□ -0.73
ACTN1-216ENST00000556083 C17orf62Q9BQA9 187 aa10.52□□□□□ -0.73
ACTN1-216ENST00000556083 ZNF304Q9HCX3 659 aa10.52□□□□□ -0.73
ACTN1-216ENST00000556083 Q9N2J8 555 aa10.52□□□□□ -0.73
ACTN1-216ENST00000556083 ACP6Q9NPH0 428 aa10.52□□□□□ -0.73
ACTN1-216ENST00000556083 ERVK-11Q9UQG0 969 aa10.52□□□□□ -0.73
ACTN1-216ENST00000556083 REXO2Q9Y3B8 237 aaKnown RBP10.52□□□□□ -0.73
ACTN1-216ENST00000556083 UPK3BL1B0FP48 263 aa10.51□□□□□ -0.73
ACTN1-216ENST00000556083 UPK3BL2E5RIL1 263 aa10.51□□□□□ -0.73
ACTN1-216ENST00000556083 PEX12O00623 359 aa10.51□□□□□ -0.73
ACTN1-216ENST00000556083 CYP17A1P05093 508 aa10.51□□□□□ -0.73
ACTN1-216ENST00000556083 PGRP06401 933 aa10.51□□□□□ -0.73
ACTN1-216ENST00000556083 EBLN1P0CF75 366 aa10.51□□□□□ -0.73
ACTN1-216ENST00000556083 TAL1P17542 331 aaPredicted RBP10.51□□□□□ -0.73
ACTN1-216ENST00000556083 S100A1P23297 94 aa10.51□□□□□ -0.73
ACTN1-216ENST00000556083 ASPAP45381 313 aa10.51□□□□□ -0.73
ACTN1-216ENST00000556083 GPM6BQ13491 265 aa10.51□□□□□ -0.73
ACTN1-216ENST00000556083 SYT16Q17RD7 645 aa10.51□□□□□ -0.73
ACTN1-216ENST00000556083 PLEKHS1Q5SXH7 462 aa10.51□□□□□ -0.73
ACTN1-216ENST00000556083 GPR107Q5VW38 600 aa10.51□□□□□ -0.73
ACTN1-216ENST00000556083 OLFML2AQ68BL7 652 aa10.51□□□□□ -0.73
ACTN1-216ENST00000556083 RPL13AP3Q6NVV1 102 aa10.51□□□□□ -0.73
ACTN1-216ENST00000556083 UNQ6126/PRO20091Q6UXV3 157 aa10.51□□□□□ -0.73
ACTN1-216ENST00000556083 FRRS1Q6ZNA5 592 aa10.51□□□□□ -0.73
ACTN1-216ENST00000556083 AKAP14Q86UN6 197 aa10.51□□□□□ -0.73
ACTN1-216ENST00000556083 ZC3HC1Q86WB0 502 aaKnown RBP10.51□□□□□ -0.73
ACTN1-216ENST00000556083 PCDH19Q8TAB3 1148 aa10.51□□□□□ -0.73
ACTN1-216ENST00000556083 FCRL4Q96PJ5 515 aa10.51□□□□□ -0.73
ACTN1-216ENST00000556083 MNTQ99583 582 aa10.51□□□□□ -0.73
ACTN1-216ENST00000556083 BCO2Q9BYV7 579 aa10.51□□□□□ -0.73
ACTN1-216ENST00000556083 SLCO1B3Q9NPD5 702 aa10.51□□□□□ -0.73
ACTN1-216ENST00000556083 TDP1Q9NUW8 608 aa10.51□□□□□ -0.73
ACTN1-216ENST00000556083 MCUBQ9NWR8 336 aa10.51□□□□□ -0.73
ACTN1-216ENST00000556083 NKIRAS2Q9NYR9 191 aa10.51□□□□□ -0.73
ACTN1-216ENST00000556083 FKBPLQ9UIM3 349 aa10.51□□□□□ -0.73
ACTN1-216ENST00000556083 EIF3FO00303 357 aaPredicted RBP10.51□□□□□ -0.73
ACTN1-216ENST00000556083 PCDH7O60245 1069 aa10.51□□□□□ -0.73
ACTN1-216ENST00000556083 ADH5P11766 374 aa10.51□□□□□ -0.73
ACTN1-216ENST00000556083 ACTR1BP42025 376 aa10.51□□□□□ -0.73
ACTN1-216ENST00000556083 INCA1Q0VD86 236 aa10.51□□□□□ -0.73
ACTN1-216ENST00000556083 E2F2Q14209 437 aa10.51□□□□□ -0.73
ACTN1-216ENST00000556083 BTN2A1Q7KYR7 527 aa10.51□□□□□ -0.73
ACTN1-216ENST00000556083 CYP2U1Q7Z449 544 aa10.51□□□□□ -0.73
ACTN1-216ENST00000556083 LIX1Q8N485 282 aa10.51□□□□□ -0.73
ACTN1-216ENST00000556083 HDDC3Q8N4P3 179 aa10.51□□□□□ -0.73
ACTN1-216ENST00000556083 NAT16Q8N8M0 369 aa10.51□□□□□ -0.73
ACTN1-216ENST00000556083 RBM15BQ8NDT2 890 aaKnown RBP10.51□□□□□ -0.73
ACTN1-216ENST00000556083 SIPA1Q96FS4 1042 aa10.51□□□□□ -0.73
ACTN1-216ENST00000556083 FBXO9Q9UK97 447 aaPredicted RBP10.51□□□□□ -0.73
ACTN1-216ENST00000556083 ELOA3DA6NLF2 546 aaPredicted RBP10.51□□□□□ -0.73
ACTN1-216ENST00000556083 ANXA2P2A6NMY6 339 aa10.51□□□□□ -0.73
ACTN1-216ENST00000556083 ZNF726A6NNF4 738 aa10.51□□□□□ -0.73
ACTN1-216ENST00000556083 CLDN25C9JDP6 229 aa10.51□□□□□ -0.73
ACTN1-216ENST00000556083 PSMD11O00231 422 aa10.51□□□□□ -0.73
ACTN1-216ENST00000556083 PPP1R11O60927 126 aaPredicted RBP10.51□□□□□ -0.73
ACTN1-216ENST00000556083 ANXA2P07355 339 aaKnown RBP10.51□□□□□ -0.73
ACTN1-216ENST00000556083 FGFR3P22607 806 aa10.51□□□□□ -0.73
ACTN1-216ENST00000556083 DNAJA1P31689 397 aaKnown RBP10.51□□□□□ -0.73
ACTN1-216ENST00000556083 TUBA1BP68363 451 aa10.51□□□□□ -0.73
ACTN1-216ENST00000556083 TUBA4AP68366 448 aa10.51□□□□□ -0.73
ACTN1-216ENST00000556083 ADAM8P78325 824 aa10.51□□□□□ -0.73
ACTN1-216ENST00000556083 GRIK2Q13002 908 aa10.51□□□□□ -0.73
ACTN1-216ENST00000556083 ECM1Q16610 540 aa10.51□□□□□ -0.73
ACTN1-216ENST00000556083 ELOA3BQ3SY89 546 aa10.51□□□□□ -0.73
ACTN1-216ENST00000556083 MBLAC2Q68D91 279 aa10.51□□□□□ -0.73
ACTN1-216ENST00000556083 UNC5DQ6UXZ4 953 aa10.51□□□□□ -0.73
ACTN1-216ENST00000556083 RBM44Q6ZP01 1051 aaKnown RBP10.51□□□□□ -0.73
ACTN1-216ENST00000556083 TUBA1AQ71U36 451 aa10.51□□□□□ -0.73
ACTN1-216ENST00000556083 ALYREFQ86V81 257 aaKnown RBP10.51□□□□□ -0.73
ACTN1-216ENST00000556083 DCUN1D3Q8IWE4 304 aa10.51□□□□□ -0.73
ACTN1-216ENST00000556083 KLHL36Q8N4N3 616 aa10.51□□□□□ -0.73
ACTN1-216ENST00000556083 ELOA3Q8NG57 546 aa10.51□□□□□ -0.73
ACTN1-216ENST00000556083 SH3RF2Q8TEC5 729 aa10.51□□□□□ -0.73
ACTN1-216ENST00000556083 NPAS2Q99743 824 aa10.51□□□□□ -0.73
ACTN1-216ENST00000556083 TBL1XR1Q9BZK7 514 aa10.51□□□□□ -0.73
ACTN1-216ENST00000556083 C1orf21Q9H246 121 aa10.51□□□□□ -0.73
Retrieved 100 of 20,778 RNA–protein pairs in 37.9 ms