RNA–Protein interactions for RNA: ENST00000555890.5

SLIRP-204, Transcript of SRA stem-loop interacting RNA binding protein, humanhuman

TSL 2

Gene SLIRP, Length 471 nt, Biotype nonsense mediated decay, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SLIRP-204ENST00000555890 PI4KAP42356 2102 aa6.71□□□□□ -1.34
SLIRP-204ENST00000555890 SYCE1LA8MT33 242 aa6.7□□□□□ -1.34
SLIRP-204ENST00000555890 HEPACAM2A8MVW5 462 aa6.7□□□□□ -1.34
SLIRP-204ENST00000555890 FCHO1O14526 889 aa6.7□□□□□ -1.34
SLIRP-204ENST00000555890 PRMT5O14744 637 aaPredicted RBP6.7□□□□□ -1.34
SLIRP-204ENST00000555890 IPO13O94829 963 aaKnown RBP6.7□□□□□ -1.34
SLIRP-204ENST00000555890 WISP3O95389 354 aaPredicted RBP6.7□□□□□ -1.34
SLIRP-204ENST00000555890 CLDN7O95471 211 aa6.7□□□□□ -1.34
SLIRP-204ENST00000555890 PRAMEF1O95521 474 aa6.7□□□□□ -1.34
SLIRP-204ENST00000555890 UGT2B4P06133 528 aa6.7□□□□□ -1.34
SLIRP-204ENST00000555890 CTSBP07858 339 aa6.7□□□□□ -1.34
SLIRP-204ENST00000555890 SBK3P0C264 359 aa6.7□□□□□ -1.34
SLIRP-204ENST00000555890 PRSS56P0CW18 603 aa6.7□□□□□ -1.34
SLIRP-204ENST00000555890 CD1DP15813 335 aa6.7□□□□□ -1.34
SLIRP-204ENST00000555890 ALOX15P16050 662 aaPredicted RBP6.7□□□□□ -1.34
SLIRP-204ENST00000555890 ZNF37AP17032 561 aaPredicted RBP6.7□□□□□ -1.34
SLIRP-204ENST00000555890 ZNF30P17039 623 aa6.7□□□□□ -1.34
SLIRP-204ENST00000555890 CHRM3P20309 590 aa6.7□□□□□ -1.34
SLIRP-204ENST00000555890 IMPDH1P20839 514 aa6.7□□□□□ -1.34
SLIRP-204ENST00000555890 RPS3P23396 243 aaKnown RBP eCLIP6.7□□□□□ -1.345e-12■■■■■ 28.9
SLIRP-204ENST00000555890 SERPINB3P29508 390 aa6.7□□□□□ -1.34
SLIRP-204ENST00000555890 RPL14P50914 215 aaKnown RBP6.7□□□□□ -1.34
SLIRP-204ENST00000555890 PGGT1BP53609 377 aa6.7□□□□□ -1.34
SLIRP-204ENST00000555890 IL2P60568 153 aa6.7□□□□□ -1.34
SLIRP-204ENST00000555890 TLE3Q04726 772 aa6.7□□□□□ -1.34
SLIRP-204ENST00000555890 KRT72Q14CN4 511 aa6.7□□□□□ -1.34
SLIRP-204ENST00000555890 EIF4HQ15056 248 aaKnown RBP6.7□□□□□ -1.34
SLIRP-204ENST00000555890 E2F5Q15329 346 aa6.7□□□□□ -1.34
SLIRP-204ENST00000555890 CDKN3Q16667 212 aa6.7□□□□□ -1.34
SLIRP-204ENST00000555890 GEN1Q17RS7 908 aa6.7□□□□□ -1.34
SLIRP-204ENST00000555890 PREPLQ4J6C6 727 aaPredicted RBP6.7□□□□□ -1.34
SLIRP-204ENST00000555890 YOD1Q5VVQ6 348 aaPredicted RBP6.7□□□□□ -1.34
SLIRP-204ENST00000555890 CES4AQ5XG92 561 aa6.7□□□□□ -1.34
SLIRP-204ENST00000555890 FAM91A1Q658Y4 838 aa6.7□□□□□ -1.34
SLIRP-204ENST00000555890 SLC6A19Q695T7 634 aa6.7□□□□□ -1.34
SLIRP-204ENST00000555890 PTRHD1Q6GMV3 140 aaKnown RBP6.7□□□□□ -1.34
SLIRP-204ENST00000555890 CRTC1Q6UUV9 634 aa6.7□□□□□ -1.34
SLIRP-204ENST00000555890 FAM151BQ6UXP7 276 aa6.7□□□□□ -1.34
SLIRP-204ENST00000555890 NAPRTQ6XQN6 538 aa6.7□□□□□ -1.34
SLIRP-204ENST00000555890 Q6ZS52 159 aa6.7□□□□□ -1.34
SLIRP-204ENST00000555890 TMPRSS7Q7RTY8 843 aa6.7□□□□□ -1.34
SLIRP-204ENST00000555890 CLNKQ7Z7G1 428 aa6.7□□□□□ -1.34
SLIRP-204ENST00000555890 ISCA2Q86U28 154 aa6.7□□□□□ -1.34
SLIRP-204ENST00000555890 SERPINA9Q86WD7 417 aa6.7□□□□□ -1.34
SLIRP-204ENST00000555890 RAVER1Q8IY67 606 aaKnown RBP6.7□□□□□ -1.34
SLIRP-204ENST00000555890 C10orf67Q8IYJ2 551 aa6.7□□□□□ -1.34
SLIRP-204ENST00000555890 PHACTR4Q8IZ21 702 aa6.7□□□□□ -1.34
SLIRP-204ENST00000555890 SPATA6LQ8N4H0 392 aa6.7□□□□□ -1.34
SLIRP-204ENST00000555890 CPA6Q8N4T0 437 aa6.7□□□□□ -1.34
SLIRP-204ENST00000555890 KDM1BQ8NB78 822 aa6.7□□□□□ -1.34
SLIRP-204ENST00000555890 CHST14Q8NCH0 376 aa6.7□□□□□ -1.34
SLIRP-204ENST00000555890 OR2A12Q8NGT7 310 aa6.7□□□□□ -1.34
SLIRP-204ENST00000555890 RHEBL1Q8TAI7 183 aa6.7□□□□□ -1.34
SLIRP-204ENST00000555890 NUDT8Q8WV74 236 aa6.7□□□□□ -1.34
SLIRP-204ENST00000555890 UCMAQ8WVF2 138 aa6.7□□□□□ -1.34
SLIRP-204ENST00000555890 ANKRD49Q8WVL7 239 aa6.7□□□□□ -1.34
SLIRP-204ENST00000555890 FAM3CQ92520 227 aa6.7□□□□□ -1.34
SLIRP-204ENST00000555890 KCNJ9Q92806 393 aa6.7□□□□□ -1.34
SLIRP-204ENST00000555890 INPP5DQ92835 1189 aa6.7□□□□□ -1.34
SLIRP-204ENST00000555890 DNASE1L2Q92874 299 aa6.7□□□□□ -1.34
SLIRP-204ENST00000555890 SKA1Q96BD8 255 aa6.7□□□□□ -1.34
SLIRP-204ENST00000555890 ULK4Q96C45 1275 aa6.7□□□□□ -1.34
SLIRP-204ENST00000555890 SGF29Q96ES7 293 aa6.7□□□□□ -1.34
SLIRP-204ENST00000555890 NSL1Q96IY1 281 aa6.7□□□□□ -1.34
SLIRP-204ENST00000555890 ZC3H10Q96K80 434 aaKnown RBP6.7□□□□□ -1.34
SLIRP-204ENST00000555890 MRGPRX3Q96LB0 322 aa6.7□□□□□ -1.34
SLIRP-204ENST00000555890 KLHL32Q96NJ5 620 aa6.7□□□□□ -1.34
SLIRP-204ENST00000555890 RAB3IPQ96QF0 476 aaPredicted RBP6.7□□□□□ -1.34
SLIRP-204ENST00000555890 MCCC1Q96RQ3 725 aaPredicted RBP6.7□□□□□ -1.34
SLIRP-204ENST00000555890 SORT1Q99523 831 aa6.7□□□□□ -1.34
SLIRP-204ENST00000555890 TRMOQ9BU70 441 aa6.7□□□□□ -1.34
SLIRP-204ENST00000555890 C20orf27Q9GZN8 174 aa6.7□□□□□ -1.34
SLIRP-204ENST00000555890 DERL2Q9GZP9 239 aa6.7□□□□□ -1.34
SLIRP-204ENST00000555890 CLPBQ9H078 707 aa6.7□□□□□ -1.34
SLIRP-204ENST00000555890 CDH19Q9H159 772 aa6.7□□□□□ -1.34
SLIRP-204ENST00000555890 ALG9Q9H6U8 611 aa6.7□□□□□ -1.34
SLIRP-204ENST00000555890 BRD9Q9H8M2 597 aa6.7□□□□□ -1.34
SLIRP-204ENST00000555890 ZFP14Q9HCL3 533 aa6.7□□□□□ -1.34
SLIRP-204ENST00000555890 IL26Q9NPH9 171 aa6.7□□□□□ -1.34
SLIRP-204ENST00000555890 ELOVL2Q9NXB9 296 aa6.7□□□□□ -1.34
SLIRP-204ENST00000555890 PKD2L2Q9NZM6 624 aa6.7□□□□□ -1.34
SLIRP-204ENST00000555890 IL36AQ9UHA7 158 aa6.7□□□□□ -1.34
SLIRP-204ENST00000555890 CRLS1Q9UJA2 301 aa6.7□□□□□ -1.34
SLIRP-204ENST00000555890 GNPTGQ9UJJ9 305 aa6.7□□□□□ -1.34
SLIRP-204ENST00000555890 HIF3AQ9Y2N7 669 aa6.7□□□□□ -1.34
SLIRP-204ENST00000555890 OAS3Q9Y6K5 1087 aaKnown RBP6.7□□□□□ -1.34
SLIRP-204ENST00000555890 AKAP9Q99996 3911 aa6.7□□□□□ -1.34
SLIRP-204ENST00000555890 MED13LQ71F56 2210 aa6.69□□□□□ -1.34
SLIRP-204ENST00000555890 KIF26AQ9ULI4 1882 aaPredicted RBP6.69□□□□□ -1.34
SLIRP-204ENST00000555890 TRBV5-4A0A0C4DH59 114 aa6.69□□□□□ -1.34
SLIRP-204ENST00000555890 TSPAN11A1L157 253 aa6.69□□□□□ -1.34
SLIRP-204ENST00000555890 NPIPB15A6NHN6 443 aaPredicted RBP6.69□□□□□ -1.34
SLIRP-204ENST00000555890 TRPC5OSA6NMA1 111 aa6.69□□□□□ -1.34
SLIRP-204ENST00000555890 A8MT66 165 aa6.69□□□□□ -1.34
SLIRP-204ENST00000555890 A8MX80 341 aa6.69□□□□□ -1.34
SLIRP-204ENST00000555890 TTC34A8MYJ7 566 aa6.69□□□□□ -1.34
SLIRP-204ENST00000555890 ARNTLO00327 626 aa6.69□□□□□ -1.34
SLIRP-204ENST00000555890 MAN2B1O00754 1011 aa6.69□□□□□ -1.34
SLIRP-204ENST00000555890 HDAC3O15379 428 aa6.69□□□□□ -1.34
SLIRP-204ENST00000555890 TSPAN6O43657 245 aa6.69□□□□□ -1.34
Retrieved 100 of 20,778 RNA–protein pairs in 18.2 ms