RNA–Protein interactions for RNA: ENST00000555585.5

HNRNPC-220, Transcript of heterogeneous nuclear ribonucleoprotein C (C1/C2), humanhuman

TSL 2

Gene HNRNPC, Length 682 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HNRNPC-220ENST00000555585 C10orf82Q8WW14 230 aa9.4□□□□□ -0.9
HNRNPC-220ENST00000555585 RAD51AP1Q96B01 352 aa9.4□□□□□ -0.9
HNRNPC-220ENST00000555585 MED8Q96G25 268 aa9.4□□□□□ -0.9
HNRNPC-220ENST00000555585 ATG10Q9H0Y0 220 aa9.4□□□□□ -0.9
HNRNPC-220ENST00000555585 DUSP15Q9H1R2 295 aaPredicted RBP9.4□□□□□ -0.9
HNRNPC-220ENST00000555585 SLC32A1Q9H598 525 aa9.4□□□□□ -0.9
HNRNPC-220ENST00000555585 NOL11Q9H8H0 719 aaKnown RBP9.4□□□□□ -0.9
HNRNPC-220ENST00000555585 TM9SF3Q9HD45 589 aa9.4□□□□□ -0.9
HNRNPC-220ENST00000555585 PRDM8Q9NQV8 689 aa9.4□□□□□ -0.9
HNRNPC-220ENST00000555585 ABCF3Q9NUQ8 709 aa9.4□□□□□ -0.9
HNRNPC-220ENST00000555585 IMP3Q9NV31 184 aaKnown RBP9.4□□□□□ -0.9
HNRNPC-220ENST00000555585 TRNAU1APQ9NX07 287 aaKnown RBP9.4□□□□□ -0.9
HNRNPC-220ENST00000555585 STOX2Q9P2F5 926 aaPredicted RBP9.4□□□□□ -0.9
HNRNPC-220ENST00000555585 VTI1BQ9UEU0 232 aa9.4□□□□□ -0.9
HNRNPC-220ENST00000555585 PNMA8BQ9ULN7 279 aaPredicted RBP9.4□□□□□ -0.9
HNRNPC-220ENST00000555585 STK38LQ9Y2H1 464 aa9.4□□□□□ -0.9
HNRNPC-220ENST00000555585 WDR37Q9Y2I8 494 aa9.4□□□□□ -0.9
HNRNPC-220ENST00000555585 THADAQ6YHU6 1953 aa9.4□□□□□ -0.9
HNRNPC-220ENST00000555585 TMEM233B4DJY2 109 aa9.39□□□□□ -0.91
HNRNPC-220ENST00000555585 SLCO1B7G3V0H7 640 aa9.39□□□□□ -0.91
HNRNPC-220ENST00000555585 TLR4O00206 839 aa9.39□□□□□ -0.91
HNRNPC-220ENST00000555585 PPP6CO00743 305 aa9.39□□□□□ -0.91
HNRNPC-220ENST00000555585 UBFD1O14562 309 aaKnown RBP9.39□□□□□ -0.91
HNRNPC-220ENST00000555585 AZIN1O14977 448 aa9.39□□□□□ -0.91
HNRNPC-220ENST00000555585 KATNA1O75449 491 aa9.39□□□□□ -0.91
HNRNPC-220ENST00000555585 OR4F21O95013 312 aa9.39□□□□□ -0.91
HNRNPC-220ENST00000555585 TDGF1P13385 188 aa9.39□□□□□ -0.91
HNRNPC-220ENST00000555585 EPB42P16452 691 aa9.39□□□□□ -0.91
HNRNPC-220ENST00000555585 ITPKAP23677 461 aa9.39□□□□□ -0.91
HNRNPC-220ENST00000555585 GGT5P36269 586 aa9.39□□□□□ -0.91
HNRNPC-220ENST00000555585 PIK3CGP48736 1102 aa9.39□□□□□ -0.91
HNRNPC-220ENST00000555585 BLKP51451 505 aa9.39□□□□□ -0.91
HNRNPC-220ENST00000555585 CCNG1P51959 295 aa9.39□□□□□ -0.91
HNRNPC-220ENST00000555585 C21orf59P57076 290 aa9.39□□□□□ -0.91
HNRNPC-220ENST00000555585 SH3BP2P78314 561 aa9.39□□□□□ -0.91
HNRNPC-220ENST00000555585 ILF3Q12906 894 aaKnown RBP eCLIP9.39□□□□□ -0.91
HNRNPC-220ENST00000555585 SRSF5Q13243 272 aaKnown RBP9.39□□□□□ -0.91
HNRNPC-220ENST00000555585 NAE1Q13564 534 aa9.39□□□□□ -0.91
HNRNPC-220ENST00000555585 CLCA4Q14CN2 919 aa9.39□□□□□ -0.91
HNRNPC-220ENST00000555585 PDCD2Q16342 344 aaPredicted RBP9.39□□□□□ -0.91
HNRNPC-220ENST00000555585 PTCHD3Q3KNS1 767 aa9.39□□□□□ -0.91
HNRNPC-220ENST00000555585 UAP1L1Q3KQV9 507 aa9.39□□□□□ -0.91
HNRNPC-220ENST00000555585 METTL2BQ6P1Q9 378 aaKnown RBP9.39□□□□□ -0.91
HNRNPC-220ENST00000555585 DUS1LQ6P1R4 473 aaKnown RBP9.39□□□□□ -0.91
HNRNPC-220ENST00000555585 SLC30A9Q6PML9 568 aa9.39□□□□□ -0.91
HNRNPC-220ENST00000555585 LAYNQ6UX15 382 aa9.39□□□□□ -0.91
HNRNPC-220ENST00000555585 GPRIN3Q6ZVF9 776 aa9.39□□□□□ -0.91
HNRNPC-220ENST00000555585 ZNF771Q7L3S4 317 aaPredicted RBP9.39□□□□□ -0.91
HNRNPC-220ENST00000555585 LRRC70Q7Z2Q7 622 aa9.39□□□□□ -0.91
HNRNPC-220ENST00000555585 SYVN1Q86TM6 617 aa9.39□□□□□ -0.91
HNRNPC-220ENST00000555585 C11orf74Q86VG3 221 aa9.39□□□□□ -0.91
HNRNPC-220ENST00000555585 IQCHQ86VS3 1027 aa9.39□□□□□ -0.91
HNRNPC-220ENST00000555585 PARGQ86W56 976 aa9.39□□□□□ -0.91
HNRNPC-220ENST00000555585 DCUN1D3Q8IWE4 304 aa9.39□□□□□ -0.91
HNRNPC-220ENST00000555585 SYTL1Q8IYJ3 562 aa9.39□□□□□ -0.91
HNRNPC-220ENST00000555585 TBC1D21Q8IYX1 336 aa9.39□□□□□ -0.91
HNRNPC-220ENST00000555585 CLYBLQ8N0X4 340 aa9.39□□□□□ -0.91
HNRNPC-220ENST00000555585 PPFIBP2Q8ND30 876 aa9.39□□□□□ -0.91
HNRNPC-220ENST00000555585 OR5K2Q8NHB8 316 aa9.39□□□□□ -0.91
HNRNPC-220ENST00000555585 CCL4L1Q8NHW4 92 aa9.39□□□□□ -0.91
HNRNPC-220ENST00000555585 AGAP11Q8TF27 550 aa9.39□□□□□ -0.91
HNRNPC-220ENST00000555585 SKA1Q96BD8 255 aa9.39□□□□□ -0.91
HNRNPC-220ENST00000555585 PYCR2Q96C36 320 aa9.39□□□□□ -0.91
HNRNPC-220ENST00000555585 FAR2Q96K12 515 aa9.39□□□□□ -0.91
HNRNPC-220ENST00000555585 RILPQ96NA2 401 aa9.39□□□□□ -0.91
HNRNPC-220ENST00000555585 PLCD4Q9BRC7 762 aa9.39□□□□□ -0.91
HNRNPC-220ENST00000555585 SIKE1Q9BRV8 207 aa9.39□□□□□ -0.91
HNRNPC-220ENST00000555585 GSDMCQ9BYG8 508 aa9.39□□□□□ -0.91
HNRNPC-220ENST00000555585 TCEAL2Q9H3H9 227 aaPredicted RBP9.39□□□□□ -0.91
HNRNPC-220ENST00000555585 IPPKQ9H8X2 491 aa9.39□□□□□ -0.91
HNRNPC-220ENST00000555585 ZBTB26Q9HCK0 441 aa9.39□□□□□ -0.91
HNRNPC-220ENST00000555585 GPR27Q9NS67 375 aa9.39□□□□□ -0.91
HNRNPC-220ENST00000555585 DNAJC11Q9NVH1 559 aa9.39□□□□□ -0.91
HNRNPC-220ENST00000555585 DNAJC28Q9NX36 388 aa9.39□□□□□ -0.91
HNRNPC-220ENST00000555585 KCNK4Q9NYG8 393 aa9.39□□□□□ -0.91
HNRNPC-220ENST00000555585 HAO1Q9UJM8 370 aa9.39□□□□□ -0.91
HNRNPC-220ENST00000555585 PLAGL1Q9UM63 463 aa9.39□□□□□ -0.91
HNRNPC-220ENST00000555585 TRAF6Q9Y4K3 522 aa9.39□□□□□ -0.91
HNRNPC-220ENST00000555585 ST14Q9Y5Y6 855 aa9.39□□□□□ -0.91
HNRNPC-220ENST00000555585 HEBP2Q9Y5Z4 205 aa9.39□□□□□ -0.91
HNRNPC-220ENST00000555585 DGKBQ9Y6T7 804 aa9.39□□□□□ -0.91
HNRNPC-220ENST00000555585 FANCMQ8IYD8 2048 aa9.39□□□□□ -0.91
HNRNPC-220ENST00000555585 ATXN2Q99700 1313 aaKnown RBP9.38□□□□□ -0.91
HNRNPC-220ENST00000555585 TRBV23OR9-2A0A075B6M9 112 aa9.38□□□□□ -0.91
HNRNPC-220ENST00000555585 ERICH4A6NGS2 130 aa9.38□□□□□ -0.91
HNRNPC-220ENST00000555585 PRR19A6NJB7 356 aa9.38□□□□□ -0.91
HNRNPC-220ENST00000555585 MYO1CO00159 1063 aa9.38□□□□□ -0.91
HNRNPC-220ENST00000555585 MATN2O00339 956 aa9.38□□□□□ -0.91
HNRNPC-220ENST00000555585 EBAG9O00559 213 aa9.38□□□□□ -0.91
HNRNPC-220ENST00000555585 OR7A17O14581 309 aa9.38□□□□□ -0.91
HNRNPC-220ENST00000555585 HDAC3O15379 428 aa9.38□□□□□ -0.91
HNRNPC-220ENST00000555585 DIAPH2O60879 1101 aa9.38□□□□□ -0.91
HNRNPC-220ENST00000555585 SKAP2O75563 359 aaPredicted RBP9.38□□□□□ -0.91
HNRNPC-220ENST00000555585 ESRRBO95718 433 aa9.38□□□□□ -0.91
HNRNPC-220ENST00000555585 SLC16A8O95907 504 aa9.38□□□□□ -0.91
HNRNPC-220ENST00000555585 OTCP00480 354 aa9.38□□□□□ -0.91
HNRNPC-220ENST00000555585 JUNDP17535 347 aa9.38□□□□□ -0.91
HNRNPC-220ENST00000555585 IMPA1P29218 277 aa9.38□□□□□ -0.91
HNRNPC-220ENST00000555585 SERPINB3P29508 390 aa9.38□□□□□ -0.91
HNRNPC-220ENST00000555585 SLC6A12P48065 614 aa9.38□□□□□ -0.91
Retrieved 100 of 20,778 RNA–protein pairs in 33.5 ms