RNA–Protein interactions for RNA: ENST00000555557.5

SRP54-208, Transcript of signal recognition particle 54, humanhuman

TSL 2 BASIC

Gene SRP54, Length 1,949 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SRP54-208ENST00000555557 FIS1Q9Y3D6 152 aa9.93□□□□□ -0.82
SRP54-208ENST00000555557 PLXND1Q9Y4D7 1925 aa9.93□□□□□ -0.82
SRP54-208ENST00000555557 SPAG17Q6Q759 2223 aa9.93□□□□□ -0.82
SRP54-208ENST00000555557 SRRM3A6NNA2 597 aaPredicted RBP9.92□□□□□ -0.82
SRP54-208ENST00000555557 TMEM233B4DJY2 109 aa9.92□□□□□ -0.82
SRP54-208ENST00000555557 NDUFAB1O14561 156 aa9.92□□□□□ -0.82
SRP54-208ENST00000555557 VILLO15195 856 aa9.92□□□□□ -0.82
SRP54-208ENST00000555557 STK16O75716 305 aa9.92□□□□□ -0.82
SRP54-208ENST00000555557 CSF2P04141 144 aa9.92□□□□□ -0.82
SRP54-208ENST00000555557 IMPA1P29218 277 aa9.92□□□□□ -0.82
SRP54-208ENST00000555557 MAPK9P45984 424 aa9.92□□□□□ -0.82
SRP54-208ENST00000555557 C21orf59P57076 290 aa9.92□□□□□ -0.82
SRP54-208ENST00000555557 SH3BP2P78314 561 aa9.92□□□□□ -0.82
SRP54-208ENST00000555557 FASTKQ14296 549 aaKnown RBP9.92□□□□□ -0.82
SRP54-208ENST00000555557 GRB7Q14451 532 aa9.92□□□□□ -0.82
SRP54-208ENST00000555557 RPE65Q16518 533 aa9.92□□□□□ -0.82
SRP54-208ENST00000555557 LPAL2Q16609 132 aa9.92□□□□□ -0.82
SRP54-208ENST00000555557 AGTRAPQ6RW13 159 aa9.92□□□□□ -0.82
SRP54-208ENST00000555557 GOLGA7Q7Z5G4 137 aa9.92□□□□□ -0.82
SRP54-208ENST00000555557 TAF8Q7Z7C8 310 aa9.92□□□□□ -0.82
SRP54-208ENST00000555557 CUZD1Q86UP6 607 aa9.92□□□□□ -0.82
SRP54-208ENST00000555557 OR52B6Q8NGF0 335 aa9.92□□□□□ -0.82
SRP54-208ENST00000555557 OR9A1PQ8NGU1 263 aa9.92□□□□□ -0.82
SRP54-208ENST00000555557 ZNF483Q8TF39 744 aaPredicted RBP9.92□□□□□ -0.82
SRP54-208ENST00000555557 ZNF480Q8WV37 535 aa9.92□□□□□ -0.82
SRP54-208ENST00000555557 PATE1Q8WXA2 126 aa9.92□□□□□ -0.82
SRP54-208ENST00000555557 PIGKQ92643 395 aa9.92□□□□□ -0.82
SRP54-208ENST00000555557 NELL1Q92832 810 aa9.92□□□□□ -0.82
SRP54-208ENST00000555557 FBXL8Q96CD0 374 aa9.92□□□□□ -0.82
SRP54-208ENST00000555557 CDK15Q96Q40 435 aa9.92□□□□□ -0.82
SRP54-208ENST00000555557 LRFN3Q9BTN0 628 aa9.92□□□□□ -0.82
SRP54-208ENST00000555557 LRRC61Q9BV99 259 aa9.92□□□□□ -0.82
SRP54-208ENST00000555557 C1QTNF3Q9BXJ4 246 aa9.92□□□□□ -0.82
SRP54-208ENST00000555557 ILKAPQ9H0C8 392 aaPredicted RBP9.92□□□□□ -0.82
SRP54-208ENST00000555557 NOL11Q9H8H0 719 aaKnown RBP9.92□□□□□ -0.82
SRP54-208ENST00000555557 FSCN3Q9NQT6 498 aa9.92□□□□□ -0.82
SRP54-208ENST00000555557 INTS7Q9NVH2 962 aaKnown RBP9.92□□□□□ -0.82
SRP54-208ENST00000555557 TAAR2Q9P1P5 351 aa9.92□□□□□ -0.82
SRP54-208ENST00000555557 DCTN4Q9UJW0 460 aa9.92□□□□□ -0.82
SRP54-208ENST00000555557 TMCO1Q9UM00 188 aa9.92□□□□□ -0.82
SRP54-208ENST00000555557 SLC22A14Q9Y267 594 aa9.92□□□□□ -0.82
SRP54-208ENST00000555557 TNPO3Q9Y5L0 923 aaKnown RBP9.92□□□□□ -0.82
SRP54-208ENST00000555557 CEP192Q8TEP8 1941 aa9.92□□□□□ -0.82
SRP54-208ENST00000555557 MYO1CO00159 1063 aa9.92□□□□□ -0.82
SRP54-208ENST00000555557 SNX3O60493 162 aa9.92□□□□□ -0.82
SRP54-208ENST00000555557 SDC3O75056 442 aa9.92□□□□□ -0.82
SRP54-208ENST00000555557 NME1P15531 152 aaKnown RBP9.92□□□□□ -0.82
SRP54-208ENST00000555557 HNMTP50135 292 aa9.92□□□□□ -0.82
SRP54-208ENST00000555557 BLKP51451 505 aa9.92□□□□□ -0.82
SRP54-208ENST00000555557 GTF2A1P52655 376 aaPredicted RBP9.92□□□□□ -0.82
SRP54-208ENST00000555557 NAE1Q13564 534 aa9.92□□□□□ -0.82
SRP54-208ENST00000555557 TSTA3Q13630 321 aaPredicted RBP9.92□□□□□ -0.82
SRP54-208ENST00000555557 GTF2H2Q13888 395 aa9.92□□□□□ -0.82
SRP54-208ENST00000555557 KRT33BQ14525 404 aa9.92□□□□□ -0.82
SRP54-208ENST00000555557 RBBP7Q16576 425 aa9.92□□□□□ -0.82
SRP54-208ENST00000555557 SH2D4BQ5SQS7 431 aa9.92□□□□□ -0.82
SRP54-208ENST00000555557 GTF2H2CQ6P1K8 395 aa9.92□□□□□ -0.82
SRP54-208ENST00000555557 TTC23LQ6PF05 361 aa9.92□□□□□ -0.82
SRP54-208ENST00000555557 ABRAXAS1Q6UWZ7 409 aa9.92□□□□□ -0.82
SRP54-208ENST00000555557 PIGWQ7Z7B1 504 aa9.92□□□□□ -0.82
SRP54-208ENST00000555557 DCUN1D3Q8IWE4 304 aa9.92□□□□□ -0.82
SRP54-208ENST00000555557 SYTL1Q8IYJ3 562 aa9.92□□□□□ -0.82
SRP54-208ENST00000555557 TBC1D21Q8IYX1 336 aa9.92□□□□□ -0.82
SRP54-208ENST00000555557 FBXO15Q8NCQ5 510 aaPredicted RBP9.92□□□□□ -0.82
SRP54-208ENST00000555557 PIWIL2Q8TC59 973 aaKnown RBP9.92□□□□□ -0.82
SRP54-208ENST00000555557 LMX1AQ8TE12 382 aa9.92□□□□□ -0.82
SRP54-208ENST00000555557 JPH3Q8WXH2 748 aaPredicted RBP9.92□□□□□ -0.82
SRP54-208ENST00000555557 RAD51AP1Q96B01 352 aa9.92□□□□□ -0.82
SRP54-208ENST00000555557 MED8Q96G25 268 aa9.92□□□□□ -0.82
SRP54-208ENST00000555557 GSDMCQ9BYG8 508 aa9.92□□□□□ -0.82
SRP54-208ENST00000555557 NSRP1Q9H0G5 558 aaKnown RBP9.92□□□□□ -0.82
SRP54-208ENST00000555557 TRIT1Q9H3H1 467 aaKnown RBP9.92□□□□□ -0.82
SRP54-208ENST00000555557 MID1IP1Q9NPA3 183 aa9.92□□□□□ -0.82
SRP54-208ENST00000555557 ZSCAN32Q9NX65 697 aa9.92□□□□□ -0.82
SRP54-208ENST00000555557 ZNF624Q9P2J8 865 aaPredicted RBP9.92□□□□□ -0.82
SRP54-208ENST00000555557 OPTCQ9UBM4 332 aa9.92□□□□□ -0.82
SRP54-208ENST00000555557 ZNF225Q9UK10 706 aa9.92□□□□□ -0.82
SRP54-208ENST00000555557 PILRBQ9UKJ0 227 aa9.92□□□□□ -0.82
SRP54-208ENST00000555557 RAP2CQ9Y3L5 183 aa9.92□□□□□ -0.82
SRP54-208ENST00000555557 A6NCN8 305 aa9.91□□□□□ -0.82
SRP54-208ENST00000555557 K7EPI3 171 aa9.91□□□□□ -0.82
SRP54-208ENST00000555557 OR7A17O14581 309 aa9.91□□□□□ -0.82
SRP54-208ENST00000555557 KATNA1O75449 491 aa9.91□□□□□ -0.82
SRP54-208ENST00000555557 WDR47O94967 919 aa9.91□□□□□ -0.82
SRP54-208ENST00000555557 GGT5P36269 586 aa9.91□□□□□ -0.82
SRP54-208ENST00000555557 SERPINB5P36952 375 aa9.91□□□□□ -0.82
SRP54-208ENST00000555557 ARL1P40616 181 aaPredicted RBP9.91□□□□□ -0.82
SRP54-208ENST00000555557 SLC19A1P41440 591 aa9.91□□□□□ -0.82
SRP54-208ENST00000555557 HALP42357 657 aa9.91□□□□□ -0.82
SRP54-208ENST00000555557 SLC6A12P48065 614 aa9.91□□□□□ -0.82
SRP54-208ENST00000555557 RPL14P50914 215 aaKnown RBP9.91□□□□□ -0.82
SRP54-208ENST00000555557 FOXA1P55317 472 aa9.91□□□□□ -0.82
SRP54-208ENST00000555557 BNC1Q01954 994 aa9.91□□□□□ -0.82
SRP54-208ENST00000555557 PRKAA1Q13131 559 aa9.91□□□□□ -0.82
SRP54-208ENST00000555557 SIM2Q14190 667 aaPredicted RBP9.91□□□□□ -0.82
SRP54-208ENST00000555557 ZSCAN26Q16670 478 aa9.91□□□□□ -0.82
SRP54-208ENST00000555557 KIF19Q2TAC6 998 aa9.91□□□□□ -0.82
SRP54-208ENST00000555557 CDKL4Q5MAI5 379 aa9.91□□□□□ -0.82
SRP54-208ENST00000555557 CLEC6AQ6EIG7 209 aa9.91□□□□□ -0.82
SRP54-208ENST00000555557 SUSD1Q6UWL2 747 aa9.91□□□□□ -0.82
Retrieved 100 of 20,778 RNA–protein pairs in 18.7 ms