RNA–Protein interactions for RNA: ENST00000555541.1

SNX6-204, Transcript of sorting nexin 6, humanhuman

TSL 5

Gene SNX6, Length 339 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNX6-204ENST00000555541 NFATC2Q13469 925 aa2.93□□□□□ -1.94
SNX6-204ENST00000555541 IRF3Q14653 427 aa2.93□□□□□ -1.94
SNX6-204ENST00000555541 NECTIN1Q15223 517 aa2.93□□□□□ -1.94
SNX6-204ENST00000555541 HSP90AB4PQ58FF6 505 aa2.93□□□□□ -1.94
SNX6-204ENST00000555541 SLC25A30Q5SVS4 291 aa2.93□□□□□ -1.94
SNX6-204ENST00000555541 WLSQ5T9L3 541 aa2.93□□□□□ -1.94
SNX6-204ENST00000555541 FIGLAQ6QHK4 219 aa2.93□□□□□ -1.94
SNX6-204ENST00000555541 HAUS6Q7Z4H7 955 aa2.93□□□□□ -1.94
SNX6-204ENST00000555541 PTAR1Q7Z6K3 402 aaPredicted RBP2.93□□□□□ -1.94
SNX6-204ENST00000555541 LDB1Q86U70 411 aaPredicted RBP2.93□□□□□ -1.94
SNX6-204ENST00000555541 AACSQ86V21 672 aa2.93□□□□□ -1.94
SNX6-204ENST00000555541 COMMD2Q86X83 199 aa2.93□□□□□ -1.94
SNX6-204ENST00000555541 HOGA1Q86XE5 327 aa2.93□□□□□ -1.94
SNX6-204ENST00000555541 CEP57L1Q8IYX8 460 aa2.93□□□□□ -1.94
SNX6-204ENST00000555541 TTC39CQ8N584 583 aa2.93□□□□□ -1.94
SNX6-204ENST00000555541 NIPA2Q8N8Q9 360 aa2.93□□□□□ -1.94
SNX6-204ENST00000555541 OR5M8Q8NGP6 311 aa2.93□□□□□ -1.94
SNX6-204ENST00000555541 PHLDA1Q8WV24 401 aaPredicted RBP2.93□□□□□ -1.94
SNX6-204ENST00000555541 NEK1Q96PY6 1258 aa2.93□□□□□ -1.94
SNX6-204ENST00000555541 USP28Q96RU2 1077 aa2.93□□□□□ -1.94
SNX6-204ENST00000555541 GPATCH1Q9BRR8 931 aaKnown RBP2.93□□□□□ -1.94
SNX6-204ENST00000555541 NUP85Q9BW27 656 aa2.93□□□□□ -1.94
SNX6-204ENST00000555541 WWTR1Q9GZV5 400 aa2.93□□□□□ -1.94
SNX6-204ENST00000555541 SPATC1LQ9H0A9 340 aa2.93□□□□□ -1.94
SNX6-204ENST00000555541 UPF3AQ9H1J1 476 aaKnown RBP2.93□□□□□ -1.94
SNX6-204ENST00000555541 EIF2B3Q9NR50 452 aaKnown RBP2.93□□□□□ -1.94
SNX6-204ENST00000555541 SEC63Q9UGP8 760 aaKnown RBP2.93□□□□□ -1.94
SNX6-204ENST00000555541 TUBE1Q9UJT0 475 aa2.93□□□□□ -1.94
SNX6-204ENST00000555541 ZHX1Q9UKY1 873 aaPredicted RBP2.93□□□□□ -1.94
SNX6-204ENST00000555541 GRID1Q9ULK0 1009 aa2.93□□□□□ -1.94
SNX6-204ENST00000555541 PLAGL1Q9UM63 463 aa2.93□□□□□ -1.94
SNX6-204ENST00000555541 MOB4Q9Y3A3 225 aa2.93□□□□□ -1.94
SNX6-204ENST00000555541 GRIP1Q9Y3R0 1128 aa2.93□□□□□ -1.94
SNX6-204ENST00000555541 ZNF541Q9H0D2 1346 aa2.93□□□□□ -1.94
SNX6-204ENST00000555541 ZNF644Q9H582 1327 aaPredicted RBP2.93□□□□□ -1.94
SNX6-204ENST00000555541 IGHV3OR16-10A0A075B7F0 116 aa2.92□□□□□ -1.94
SNX6-204ENST00000555541 ZNF195O14628 629 aa2.92□□□□□ -1.94
SNX6-204ENST00000555541 EPB41L2O43491 1005 aaKnown RBP2.92□□□□□ -1.94
SNX6-204ENST00000555541 BCL2L11O43521 198 aa2.92□□□□□ -1.94
SNX6-204ENST00000555541 PTP4A3O75365 173 aa2.92□□□□□ -1.94
SNX6-204ENST00000555541 MED24O75448 989 aa2.92□□□□□ -1.94
SNX6-204ENST00000555541 MMP12P39900 470 aa2.92□□□□□ -1.94
SNX6-204ENST00000555541 OPRL1P41146 370 aa2.92□□□□□ -1.94
SNX6-204ENST00000555541 LEPRP48357 1165 aaKnown RBP2.92□□□□□ -1.94
SNX6-204ENST00000555541 ARSEP51690 589 aa2.92□□□□□ -1.94
SNX6-204ENST00000555541 CDK3Q00526 305 aa2.92□□□□□ -1.94
SNX6-204ENST00000555541 RAPSNQ13702 412 aa2.92□□□□□ -1.94
SNX6-204ENST00000555541 E2F5Q15329 346 aa2.92□□□□□ -1.94
SNX6-204ENST00000555541 ITPRIPL2Q3MIP1 535 aa2.92□□□□□ -1.94
SNX6-204ENST00000555541 TAF1BQ53T94 588 aaPredicted RBP2.92□□□□□ -1.94
SNX6-204ENST00000555541 FAAH2Q6GMR7 532 aa2.92□□□□□ -1.94
SNX6-204ENST00000555541 CCDC70Q6NSX1 233 aa2.92□□□□□ -1.94
SNX6-204ENST00000555541 TMCO3Q6UWJ1 677 aa2.92□□□□□ -1.94
SNX6-204ENST00000555541 TMEM139Q8IV31 216 aa2.92□□□□□ -1.94
SNX6-204ENST00000555541 OR10G8Q8NGN5 311 aa2.92□□□□□ -1.94
SNX6-204ENST00000555541 HDAC2Q92769 488 aaKnown RBP2.92□□□□□ -1.94
SNX6-204ENST00000555541 SLCO2A1Q92959 643 aa2.92□□□□□ -1.94
SNX6-204ENST00000555541 SOSTQ9BQB4 213 aa2.92□□□□□ -1.94
SNX6-204ENST00000555541 FNDC11Q9BVV2 318 aa2.92□□□□□ -1.94
SNX6-204ENST00000555541 TRIM6Q9C030 488 aaPredicted RBP2.92□□□□□ -1.94
SNX6-204ENST00000555541 CPVLQ9H3G5 476 aa2.92□□□□□ -1.94
SNX6-204ENST00000555541 B3GAT1Q9P2W7 334 aa2.92□□□□□ -1.94
SNX6-204ENST00000555541 CACNG4Q9UBN1 327 aa2.92□□□□□ -1.94
SNX6-204ENST00000555541 PPP1R3CQ9UQK1 317 aa2.92□□□□□ -1.94
SNX6-204ENST00000555541 ZNF148Q9UQR1 794 aa2.92□□□□□ -1.94
SNX6-204ENST00000555541 NME7Q9Y5B8 376 aa2.92□□□□□ -1.94
SNX6-204ENST00000555541 ANGPTL3Q9Y5C1 460 aa2.92□□□□□ -1.94
SNX6-204ENST00000555541 COL4A4P53420 1690 aaPredicted RBP2.92□□□□□ -1.94
SNX6-204ENST00000555541 ANKRD61A6NGH8 418 aa2.91□□□□□ -1.94
SNX6-204ENST00000555541 C15orf61A6NNL5 157 aa2.91□□□□□ -1.94
SNX6-204ENST00000555541 PRAMEF11O60813 436 aa2.91□□□□□ -1.94
SNX6-204ENST00000555541 CYP2A7P20853 494 aa2.91□□□□□ -1.94
SNX6-204ENST00000555541 GABRA5P31644 462 aa2.91□□□□□ -1.94
SNX6-204ENST00000555541 PSMB10P40306 273 aa2.91□□□□□ -1.94
SNX6-204ENST00000555541 PNLIPRP2P54317 469 aa2.91□□□□□ -1.94
SNX6-204ENST00000555541 TPD52P55327 224 aaPredicted RBP2.91□□□□□ -1.94
SNX6-204ENST00000555541 PAX9P55771 341 aa2.91□□□□□ -1.94
SNX6-204ENST00000555541 ELAVL2Q12926 359 aaKnown RBP2.91□□□□□ -1.94
SNX6-204ENST00000555541 PEX6Q13608 980 aa2.91□□□□□ -1.94
SNX6-204ENST00000555541 PHLDA2Q53GA4 152 aa2.91□□□□□ -1.94
SNX6-204ENST00000555541 PDLIM3Q53GG5 364 aaPredicted RBP2.91□□□□□ -1.94
SNX6-204ENST00000555541 C20orf194Q5TEA3 1177 aa2.91□□□□□ -1.94
SNX6-204ENST00000555541 TMPRSS11FQ6ZWK6 438 aa2.91□□□□□ -1.94
SNX6-204ENST00000555541 CFAP206Q8IYR0 622 aa2.91□□□□□ -1.94
SNX6-204ENST00000555541 ARHGAP24Q8N264 748 aa2.91□□□□□ -1.94
SNX6-204ENST00000555541 NPEPL1Q8NDH3 523 aa2.91□□□□□ -1.94
SNX6-204ENST00000555541 OR52N5Q8NH56 324 aa2.91□□□□□ -1.94
SNX6-204ENST00000555541 ZNF519Q8TB69 540 aa2.91□□□□□ -1.94
SNX6-204ENST00000555541 SMAP2Q8WU79 429 aaPredicted RBP2.91□□□□□ -1.94
SNX6-204ENST00000555541 ARHGAP45Q92619 1136 aa2.91□□□□□ -1.94
SNX6-204ENST00000555541 DGCR6LQ9BY27 220 aa2.91□□□□□ -1.94
SNX6-204ENST00000555541 SMARCAD1Q9H4L7 1026 aa2.91□□□□□ -1.94
SNX6-204ENST00000555541 MYH16Q9H6N6 1097 aa2.91□□□□□ -1.94
SNX6-204ENST00000555541 P4HTMQ9NXG6 502 aa2.91□□□□□ -1.94
SNX6-204ENST00000555541 SPHK1Q9NYA1 384 aa2.91□□□□□ -1.94
SNX6-204ENST00000555541 WSB2Q9NYS7 404 aaPredicted RBP2.91□□□□□ -1.94
SNX6-204ENST00000555541 SRRM5B3KS81 715 aa2.9□□□□□ -1.95
SNX6-204ENST00000555541 PTGES3LE9PB15 166 aa2.9□□□□□ -1.95
SNX6-204ENST00000555541 CREB3O43889 395 aa2.9□□□□□ -1.95
SNX6-204ENST00000555541 SLC15A1P46059 708 aa2.9□□□□□ -1.95
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