RNA–Protein interactions for RNA: ENST00000555323.1

SYNE2-219, Transcript of spectrin repeat containing nuclear envelope protein 2, humanhuman

TSL 3

Gene SYNE2, Length 389 nt, Biotype processed transcript, Subcellular localisation Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SYNE2-219ENST00000555323 DPYSL5Q9BPU6 564 aa12.31□□□□□ -0.44
SYNE2-219ENST00000555323 HGH1Q9BTY7 390 aa12.31□□□□□ -0.44
SYNE2-219ENST00000555323 TRIM54Q9BYV2 358 aa12.31□□□□□ -0.44
SYNE2-219ENST00000555323 VPS11Q9H270 941 aa12.31□□□□□ -0.44
SYNE2-219ENST00000555323 VIPAS39Q9H9C1 493 aa12.31□□□□□ -0.44
SYNE2-219ENST00000555323 OGFRQ9NZT2 677 aa12.31□□□□□ -0.44
SYNE2-219ENST00000555323 SPATA7Q9P0W8 599 aa12.31□□□□□ -0.44
SYNE2-219ENST00000555323 PDP2Q9P2J9 529 aa12.31□□□□□ -0.44
SYNE2-219ENST00000555323 EPHA6Q9UF33 1036 aa12.31□□□□□ -0.44
SYNE2-219ENST00000555323 ICKQ9UPZ9 632 aa12.31□□□□□ -0.44
SYNE2-219ENST00000555323 OARD1Q9Y530 152 aa12.31□□□□□ -0.44
SYNE2-219ENST00000555323 ASXL3Q9C0F0 2248 aa12.31□□□□□ -0.44
SYNE2-219ENST00000555323 UQCRHLA0A096LP55 91 aa12.3□□□□□ -0.44
SYNE2-219ENST00000555323 SMIM23A6NLE4 172 aa12.3□□□□□ -0.44
SYNE2-219ENST00000555323 BTN3A1O00481 513 aa12.3□□□□□ -0.44
SYNE2-219ENST00000555323 GIPC1O14908 333 aa12.3□□□□□ -0.44
SYNE2-219ENST00000555323 OPA1O60313 960 aa12.3□□□□□ -0.44
SYNE2-219ENST00000555323 UQCRHP07919 91 aa12.3□□□□□ -0.44
SYNE2-219ENST00000555323 HIST1H2AGP0C0S8 130 aaPredicted RBP12.3□□□□□ -0.44
SYNE2-219ENST00000555323 PYGBP11216 843 aa12.3□□□□□ -0.44
SYNE2-219ENST00000555323 KRT15P19012 456 aa12.3□□□□□ -0.44
SYNE2-219ENST00000555323 HIST1H2ADP20671 130 aa12.3□□□□□ -0.44
SYNE2-219ENST00000555323 BDKRB1P46663 353 aa12.3□□□□□ -0.44
SYNE2-219ENST00000555323 KCNC1P48547 511 aa12.3□□□□□ -0.44
SYNE2-219ENST00000555323 CCL7P80098 99 aa12.3□□□□□ -0.44
SYNE2-219ENST00000555323 IRF9Q00978 393 aa12.3□□□□□ -0.44
SYNE2-219ENST00000555323 CFHR1Q03591 330 aa12.3□□□□□ -0.44
SYNE2-219ENST00000555323 PUM1Q14671 1186 aaKnown RBP eCLIP12.3□□□□□ -0.44
SYNE2-219ENST00000555323 TSNQ15631 228 aaKnown RBP12.3□□□□□ -0.44
SYNE2-219ENST00000555323 PHKG1Q16816 387 aa12.3□□□□□ -0.44
SYNE2-219ENST00000555323 TSNAXIP1Q2TAA8 658 aa12.3□□□□□ -0.44
SYNE2-219ENST00000555323 KRT71Q3SY84 523 aa12.3□□□□□ -0.44
SYNE2-219ENST00000555323 CEP85LQ5SZL2 805 aa12.3□□□□□ -0.44
SYNE2-219ENST00000555323 KLHL35Q6PF15 583 aa12.3□□□□□ -0.44
SYNE2-219ENST00000555323 WDR74Q6RFH5 385 aaPredicted RBP12.3□□□□□ -0.44
SYNE2-219ENST00000555323 HDXQ7Z353 690 aa12.3□□□□□ -0.44
SYNE2-219ENST00000555323 TRABD2AQ86V40 505 aa12.3□□□□□ -0.44
SYNE2-219ENST00000555323 LRRC56Q8IYG6 542 aaPredicted RBP12.3□□□□□ -0.44
SYNE2-219ENST00000555323 ADGRF3Q8IZF5 1079 aa12.3□□□□□ -0.44
SYNE2-219ENST00000555323 TMEM151AQ8N4L1 468 aa12.3□□□□□ -0.44
SYNE2-219ENST00000555323 Q8N9G6 341 aaPredicted RBP12.3□□□□□ -0.44
SYNE2-219ENST00000555323 OR2L8Q8NGY9 312 aa12.3□□□□□ -0.44
SYNE2-219ENST00000555323 PGM2Q96G03 612 aa12.3□□□□□ -0.44
SYNE2-219ENST00000555323 HIST1H2AHQ96KK5 128 aa12.3□□□□□ -0.44
SYNE2-219ENST00000555323 PKNOX2Q96KN3 472 aa12.3□□□□□ -0.44
SYNE2-219ENST00000555323 ATOH8Q96SQ7 321 aa12.3□□□□□ -0.44
SYNE2-219ENST00000555323 HIST1H2AJQ99878 128 aa12.3□□□□□ -0.44
SYNE2-219ENST00000555323 H2AFJQ9BTM1 129 aa12.3□□□□□ -0.44
SYNE2-219ENST00000555323 RAB11FIP5Q9BXF6 653 aa12.3□□□□□ -0.44
SYNE2-219ENST00000555323 SRMSQ9H3Y6 488 aa12.3□□□□□ -0.44
SYNE2-219ENST00000555323 DCDC2Q9UHG0 476 aa12.3□□□□□ -0.44
SYNE2-219ENST00000555323 LNPEPQ9UIQ6 1025 aa12.3□□□□□ -0.44
SYNE2-219ENST00000555323 TSR3Q9UJK0 312 aaKnown RBP12.3□□□□□ -0.44
SYNE2-219ENST00000555323 APOBEC2Q9Y235 224 aaKnown RBP12.3□□□□□ -0.44
SYNE2-219ENST00000555323 TDRKHQ9Y2W6 561 aaKnown RBP12.3□□□□□ -0.44
SYNE2-219ENST00000555323 ENTPD2Q9Y5L3 495 aa12.3□□□□□ -0.44
SYNE2-219ENST00000555323 SPAARA0A1B0GVQ0 90 aa12.29□□□□□ -0.44
SYNE2-219ENST00000555323 DCDC2BA2VCK2 349 aa12.29□□□□□ -0.44
SYNE2-219ENST00000555323 OR5K3A6NET4 321 aa12.29□□□□□ -0.44
SYNE2-219ENST00000555323 AGPSO00116 658 aa12.29□□□□□ -0.44
SYNE2-219ENST00000555323 MATN2O00339 956 aa12.29□□□□□ -0.44
SYNE2-219ENST00000555323 BTN3A3O00478 584 aa12.29□□□□□ -0.44
SYNE2-219ENST00000555323 MAP2K7O14733 419 aa12.29□□□□□ -0.44
SYNE2-219ENST00000555323 DUX1O43812 170 aa12.29□□□□□ -0.44
SYNE2-219ENST00000555323 PRICKLE3O43900 615 aaPredicted RBP12.29□□□□□ -0.44
SYNE2-219ENST00000555323 CPNE6O95741 557 aa12.29□□□□□ -0.44
SYNE2-219ENST00000555323 SLC16A8O95907 504 aa12.29□□□□□ -0.44
SYNE2-219ENST00000555323 C9P02748 559 aa12.29□□□□□ -0.44
SYNE2-219ENST00000555323 RPLP0P05388 317 aaKnown RBP12.29□□□□□ -0.44
SYNE2-219ENST00000555323 PROS1P07225 676 aa12.29□□□□□ -0.44
SYNE2-219ENST00000555323 GSTA1P08263 222 aa12.29□□□□□ -0.44
SYNE2-219ENST00000555323 RBP1P09455 135 aa12.29□□□□□ -0.44
SYNE2-219ENST00000555323 FTH1P19P0C7X4 201 aa12.29□□□□□ -0.44
SYNE2-219ENST00000555323 AMD1P17707 334 aa12.29□□□□□ -0.44
SYNE2-219ENST00000555323 TFEBP19484 476 aa12.29□□□□□ -0.44
SYNE2-219ENST00000555323 PKLRP30613 574 aa12.29□□□□□ -0.44
SYNE2-219ENST00000555323 SIM1P81133 766 aaPredicted RBP12.29□□□□□ -0.44
SYNE2-219ENST00000555323 PLCL1Q15111 1095 aa12.29□□□□□ -0.44
SYNE2-219ENST00000555323 TGFBIQ15582 683 aa12.29□□□□□ -0.44
SYNE2-219ENST00000555323 OR4D1Q15615 310 aa12.29□□□□□ -0.44
SYNE2-219ENST00000555323 ZXDCQ2QGD7 858 aaPredicted RBP12.29□□□□□ -0.44
SYNE2-219ENST00000555323 CDCP2Q5VXM1 449 aa12.29□□□□□ -0.44
SYNE2-219ENST00000555323 NKAIN2Q5VXU1 208 aa12.29□□□□□ -0.44
SYNE2-219ENST00000555323 ANKS6Q68DC2 871 aa12.29□□□□□ -0.44
SYNE2-219ENST00000555323 KLC3Q6P597 504 aa12.29□□□□□ -0.44
SYNE2-219ENST00000555323 TMEM71Q6P5X7 295 aa12.29□□□□□ -0.44
SYNE2-219ENST00000555323 RAB42Q8N4Z0 105 aa12.29□□□□□ -0.44
SYNE2-219ENST00000555323 LINC01555Q8NAE3 123 aa12.29□□□□□ -0.44
SYNE2-219ENST00000555323 ZNF480Q8WV37 535 aa12.29□□□□□ -0.44
SYNE2-219ENST00000555323 AHCYL2Q96HN2 611 aaKnown RBP12.29□□□□□ -0.44
SYNE2-219ENST00000555323 NRTNQ99748 197 aa12.29□□□□□ -0.44
SYNE2-219ENST00000555323 ABCG4Q9H172 646 aa12.29□□□□□ -0.44
SYNE2-219ENST00000555323 HRASLS2Q9NWW9 162 aa12.29□□□□□ -0.44
SYNE2-219ENST00000555323 SEMA5BQ9P283 1151 aa12.29□□□□□ -0.44
SYNE2-219ENST00000555323 RP1P56715 2156 aa12.29□□□□□ -0.44
SYNE2-219ENST00000555323 OR6C74A6NCV1 312 aa12.28□□□□□ -0.44
SYNE2-219ENST00000555323 NPEPPSL1A6NEC2 478 aa12.28□□□□□ -0.44
SYNE2-219ENST00000555323 ZNF839A8K0R7 811 aa12.28□□□□□ -0.44
SYNE2-219ENST00000555323 FOXO6A8MYZ6 492 aa12.28□□□□□ -0.44
SYNE2-219ENST00000555323 TARM1B6A8C7 271 aa12.28□□□□□ -0.44
Retrieved 100 of 20,778 RNA–protein pairs in 44.4 ms