RNA–Protein interactions for RNA: ENST00000555317.5

SRP54-206, Transcript of signal recognition particle 54, humanhuman

TSL 2

Gene SRP54, Length 644 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SRP54-206ENST00000555317 TUBB4BP68371 445 aa11.72□□□□□ -0.53
SRP54-206ENST00000555317 MGAT5Q09328 741 aa11.72□□□□□ -0.53
SRP54-206ENST00000555317 KCNAB1Q14722 419 aa11.72□□□□□ -0.53
SRP54-206ENST00000555317 KIR2DS3Q14952 304 aa11.72□□□□□ -0.53
SRP54-206ENST00000555317 STEAP4Q687X5 459 aa11.72□□□□□ -0.53
SRP54-206ENST00000555317 DUPD1Q68J44 220 aa11.72□□□□□ -0.53
SRP54-206ENST00000555317 CCDC81Q6ZN84 652 aa11.72□□□□□ -0.53
SRP54-206ENST00000555317 BPHLQ86WA6 291 aaPredicted RBP11.72□□□□□ -0.53
SRP54-206ENST00000555317 CCDC25Q86WR0 208 aa11.72□□□□□ -0.53
SRP54-206ENST00000555317 CNTN4Q8IWV2 1026 aa11.72□□□□□ -0.53
SRP54-206ENST00000555317 PALM2Q8IXS6 379 aa11.72□□□□□ -0.53
SRP54-206ENST00000555317 ADGRF3Q8IZF5 1079 aa11.72□□□□□ -0.53
SRP54-206ENST00000555317 CACNA2D3Q8IZS8 1091 aa11.72□□□□□ -0.53
SRP54-206ENST00000555317 ZSCAN1Q8NBB4 408 aa11.72□□□□□ -0.53
SRP54-206ENST00000555317 INPP5DQ92835 1189 aa11.72□□□□□ -0.53
SRP54-206ENST00000555317 KIAA1143Q96AT1 154 aaPredicted RBP11.72□□□□□ -0.53
SRP54-206ENST00000555317 RAD51AP1Q96B01 352 aa11.72□□□□□ -0.53
SRP54-206ENST00000555317 SLC22A18Q96BI1 424 aa11.72□□□□□ -0.53
SRP54-206ENST00000555317 GPR21Q99679 349 aa11.72□□□□□ -0.53
SRP54-206ENST00000555317 AARSD1Q9BTE6 412 aaKnown RBP11.72□□□□□ -0.53
SRP54-206ENST00000555317 APMAPQ9HDC9 416 aa11.72□□□□□ -0.53
SRP54-206ENST00000555317 SAYSD1Q9NPB0 183 aa11.72□□□□□ -0.53
SRP54-206ENST00000555317 FGF21Q9NSA1 209 aa11.72□□□□□ -0.53
SRP54-206ENST00000555317 NSMCE4AQ9NXX6 385 aa11.72□□□□□ -0.53
SRP54-206ENST00000555317 TAS2R13Q9NYV9 303 aa11.72□□□□□ -0.53
SRP54-206ENST00000555317 SEMA5BQ9P283 1151 aa11.72□□□□□ -0.53
SRP54-206ENST00000555317 KLHL42Q9P2K6 505 aa11.72□□□□□ -0.53
SRP54-206ENST00000555317 CIDEBQ9UHD4 219 aa11.72□□□□□ -0.53
SRP54-206ENST00000555317 LNPEPQ9UIQ6 1025 aa11.72□□□□□ -0.53
SRP54-206ENST00000555317 RUVBL2Q9Y230 463 aaKnown RBP11.72□□□□□ -0.53
SRP54-206ENST00000555317 SNRNP200O75643 2136 aaKnown RBP11.72□□□□□ -0.53
SRP54-206ENST00000555317 MGAQ8IWI9 3026 aa11.72□□□□□ -0.53
SRP54-206ENST00000555317 CTAGE15A4D2H0 777 aa11.71□□□□□ -0.53
SRP54-206ENST00000555317 PABPN1LA6NDY0 278 aaKnown RBP11.71□□□□□ -0.53
SRP54-206ENST00000555317 IQCJ-SCHIP1C9J366 451 aaPredicted RBP11.71□□□□□ -0.53
SRP54-206ENST00000555317 RASGRF2O14827 1237 aa11.71□□□□□ -0.53
SRP54-206ENST00000555317 RAD1O60671 282 aa11.71□□□□□ -0.53
SRP54-206ENST00000555317 CTAGE8P0CG41 777 aa11.71□□□□□ -0.53
SRP54-206ENST00000555317 CBSLP0DN79 551 aa11.71□□□□□ -0.53
SRP54-206ENST00000555317 FOLR1P15328 257 aa11.71□□□□□ -0.53
SRP54-206ENST00000555317 UGT2B7P16662 529 aa11.71□□□□□ -0.53
SRP54-206ENST00000555317 CBSP35520 551 aa11.71□□□□□ -0.53
SRP54-206ENST00000555317 SKIV2L2P42285 1042 aaKnown RBP11.71□□□□□ -0.53
SRP54-206ENST00000555317 RGS4P49798 205 aa11.71□□□□□ -0.53
SRP54-206ENST00000555317 CLCN7P51798 805 aa11.71□□□□□ -0.53
SRP54-206ENST00000555317 CUL1Q13616 776 aa11.71□□□□□ -0.53
SRP54-206ENST00000555317 FRG1Q14331 258 aaKnown RBP11.71□□□□□ -0.53
SRP54-206ENST00000555317 TGIF1Q15583 401 aa11.71□□□□□ -0.53
SRP54-206ENST00000555317 KYNUQ16719 465 aa11.71□□□□□ -0.53
SRP54-206ENST00000555317 KLHL38Q2WGJ6 581 aa11.71□□□□□ -0.53
SRP54-206ENST00000555317 LARP7Q4G0J3 582 aaKnown RBP eCLIP11.71□□□□□ -0.53
SRP54-206ENST00000555317 ACSBG2Q5FVE4 666 aa11.71□□□□□ -0.53
SRP54-206ENST00000555317 LRRC8EQ6NSJ5 796 aa11.71□□□□□ -0.53
SRP54-206ENST00000555317 CAPN12Q6ZSI9 719 aa11.71□□□□□ -0.53
SRP54-206ENST00000555317 NEK10Q6ZWH5 1172 aa11.71□□□□□ -0.53
SRP54-206ENST00000555317 GALNT7Q86SF2 657 aa11.71□□□□□ -0.53
SRP54-206ENST00000555317 CTAGE6Q86UF2 777 aa11.71□□□□□ -0.53
SRP54-206ENST00000555317 TAX1BP1Q86VP1 789 aa11.71□□□□□ -0.53
SRP54-206ENST00000555317 CTAGE4Q8IX94 777 aa11.71□□□□□ -0.53
SRP54-206ENST00000555317 NLGN4XQ8N0W4 816 aa11.71□□□□□ -0.53
SRP54-206ENST00000555317 D2HGDHQ8N465 521 aa11.71□□□□□ -0.53
SRP54-206ENST00000555317 ESX1Q8N693 406 aa11.71□□□□□ -0.53
SRP54-206ENST00000555317 GPATCH11Q8N954 259 aa11.71□□□□□ -0.53
SRP54-206ENST00000555317 NLGN4YQ8NFZ3 816 aaPredicted RBP11.71□□□□□ -0.53
SRP54-206ENST00000555317 OR8K5Q8NH50 307 aa11.71□□□□□ -0.53
SRP54-206ENST00000555317 CDKL2Q92772 493 aa11.71□□□□□ -0.53
SRP54-206ENST00000555317 NDNQ99608 321 aa11.71□□□□□ -0.53
SRP54-206ENST00000555317 NRTNQ99748 197 aa11.71□□□□□ -0.53
SRP54-206ENST00000555317 KLHL25Q9H0H3 589 aa11.71□□□□□ -0.53
SRP54-206ENST00000555317 SYTL2Q9HCH5 934 aa11.71□□□□□ -0.53
SRP54-206ENST00000555317 INTS7Q9NVH2 962 aaKnown RBP11.71□□□□□ -0.53
SRP54-206ENST00000555317 CAMSAP3Q9P1Y5 1249 aaPredicted RBP11.71□□□□□ -0.53
SRP54-206ENST00000555317 TXNDC16Q9P2K2 825 aa11.71□□□□□ -0.53
SRP54-206ENST00000555317 CORO1CQ9ULV4 474 aaPredicted RBP11.71□□□□□ -0.53
SRP54-206ENST00000555317 BTRCQ9Y297 605 aa11.71□□□□□ -0.53
SRP54-206ENST00000555317 NFS1Q9Y697 457 aa11.71□□□□□ -0.53
SRP54-206ENST00000555317 SPTBP11277 2137 aa11.71□□□□□ -0.54
SRP54-206ENST00000555317 ANKRD12Q6UB98 2062 aa11.71□□□□□ -0.54
SRP54-206ENST00000555317 A0A0J9YY10 115 aa11.7□□□□□ -0.54
SRP54-206ENST00000555317 ZNF839A8K0R7 811 aa11.7□□□□□ -0.54
SRP54-206ENST00000555317 TMEM150CB9EJG8 249 aa11.7□□□□□ -0.54
SRP54-206ENST00000555317 E7ESA3 106 aa11.7□□□□□ -0.54
SRP54-206ENST00000555317 EIF3FO00303 357 aaPredicted RBP11.7□□□□□ -0.54
SRP54-206ENST00000555317 KIAA0754O94854 1291 aa11.7□□□□□ -0.54
SRP54-206ENST00000555317 C1orf105O95561 183 aa11.7□□□□□ -0.54
SRP54-206ENST00000555317 MT-ND3P03897 115 aa11.7□□□□□ -0.54
SRP54-206ENST00000555317 CCNYL3P0C7X3 344 aa11.7□□□□□ -0.54
SRP54-206ENST00000555317 FGF5P12034 268 aa11.7□□□□□ -0.54
SRP54-206ENST00000555317 ST6GAL1P15907 406 aa11.7□□□□□ -0.54
SRP54-206ENST00000555317 CD9P21926 228 aa11.7□□□□□ -0.54
SRP54-206ENST00000555317 MCM3P25205 808 aa11.7□□□□□ -0.54
SRP54-206ENST00000555317 VAC14Q08AM6 782 aa11.7□□□□□ -0.54
SRP54-206ENST00000555317 PDAP1Q13442 181 aaKnown RBP11.7□□□□□ -0.54
SRP54-206ENST00000555317 FASTKD3Q14CZ7 662 aaKnown RBP11.7□□□□□ -0.54
SRP54-206ENST00000555317 GPR19Q15760 415 aa11.7□□□□□ -0.54
SRP54-206ENST00000555317 SLC5A12Q1EHB4 618 aa11.7□□□□□ -0.54
SRP54-206ENST00000555317 TEDDM1Q5T9Z0 273 aa11.7□□□□□ -0.54
SRP54-206ENST00000555317 ARHGAP40Q5TG30 622 aa11.7□□□□□ -0.54
SRP54-206ENST00000555317 ZNF549Q6P9A3 640 aa11.7□□□□□ -0.54
SRP54-206ENST00000555317 TRMT10BQ6PF06 316 aaKnown RBP11.7□□□□□ -0.54
Retrieved 100 of 20,778 RNA–protein pairs in 25.8 ms