RNA–Protein interactions for RNA: ENST00000555221.3

CKS1BP1-201, Transcript of CDC28 protein kinase regulatory subunit 1B pseudogene 1, humanhuman

BASIC

Gene CKS1BP1, Length 240 nt, Biotype processed pseudogene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CKS1BP1-201ENST00000555221 NUP54Q7Z3B4 507 aa5.05□□□□□ -1.6
CKS1BP1-201ENST00000555221 ARHGAP22Q7Z5H3 698 aa5.05□□□□□ -1.6
CKS1BP1-201ENST00000555221 SPATA19Q7Z5L4 167 aa5.05□□□□□ -1.6
CKS1BP1-201ENST00000555221 ZNF554Q86TJ5 538 aa5.05□□□□□ -1.6
CKS1BP1-201ENST00000555221 RFLNBQ8N5W9 214 aa5.05□□□□□ -1.6
CKS1BP1-201ENST00000555221 NPEPL1Q8NDH3 523 aa5.05□□□□□ -1.6
CKS1BP1-201ENST00000555221 OR2T12Q8NG77 320 aa5.05□□□□□ -1.6
CKS1BP1-201ENST00000555221 STAMBPL1Q96FJ0 436 aa5.05□□□□□ -1.6
CKS1BP1-201ENST00000555221 JAKMIP1Q96N16 626 aaKnown RBP5.05□□□□□ -1.6
CKS1BP1-201ENST00000555221 RTP3Q9BQQ7 232 aa5.05□□□□□ -1.6
CKS1BP1-201ENST00000555221 TRAF4Q9BUZ4 470 aaPredicted RBP5.05□□□□□ -1.6
CKS1BP1-201ENST00000555221 PANK2Q9BZ23 570 aa5.05□□□□□ -1.6
CKS1BP1-201ENST00000555221 FAM118AQ9NWS6 357 aa5.05□□□□□ -1.6
CKS1BP1-201ENST00000555221 CHCHD3Q9NX63 227 aaKnown RBP5.05□□□□□ -1.6
CKS1BP1-201ENST00000555221 PTTG2Q9NZH5 202 aa5.05□□□□□ -1.6
CKS1BP1-201ENST00000555221 MTUS1Q9ULD2 1270 aa5.05□□□□□ -1.6
CKS1BP1-201ENST00000555221 FAF1Q9UNN5 650 aaPredicted RBP5.05□□□□□ -1.6
CKS1BP1-201ENST00000555221 TNFRSF18Q9Y5U5 241 aa5.05□□□□□ -1.6
CKS1BP1-201ENST00000555221 PCDH11YQ9BZA8 1340 aa5.04□□□□□ -1.6
CKS1BP1-201ENST00000555221 TNFSF12-TNFSF13A0A0A6YY99 330 aa5.04□□□□□ -1.6
CKS1BP1-201ENST00000555221 BUB3O43684 328 aa5.04□□□□□ -1.6
CKS1BP1-201ENST00000555221 PRKNO60260 465 aaPredicted RBP5.04□□□□□ -1.6
CKS1BP1-201ENST00000555221 SLU7O95391 586 aaKnown RBP5.04□□□□□ -1.6
CKS1BP1-201ENST00000555221 ACSL3O95573 720 aa5.04□□□□□ -1.6
CKS1BP1-201ENST00000555221 GBAP04062 536 aa5.04□□□□□ -1.6
CKS1BP1-201ENST00000555221 ATP1A1P05023 1023 aaKnown RBP5.04□□□□□ -1.6
CKS1BP1-201ENST00000555221 CSN3P07498 182 aa5.04□□□□□ -1.6
CKS1BP1-201ENST00000555221 PLA2G4BP0C869 781 aa5.04□□□□□ -1.6
CKS1BP1-201ENST00000555221 SMIM18P0DKX4 95 aa5.04□□□□□ -1.6
CKS1BP1-201ENST00000555221 HAPLN1P10915 354 aaPredicted RBP5.04□□□□□ -1.6
CKS1BP1-201ENST00000555221 MYL6BP14649 208 aa5.04□□□□□ -1.6
CKS1BP1-201ENST00000555221 EPCAMP16422 314 aa5.04□□□□□ -1.6
CKS1BP1-201ENST00000555221 ACAT1P24752 427 aaKnown RBP5.04□□□□□ -1.6
CKS1BP1-201ENST00000555221 AZGP1P25311 298 aaKnown RBP5.04□□□□□ -1.6
CKS1BP1-201ENST00000555221 TLX1P31314 330 aaPredicted RBP5.04□□□□□ -1.6
CKS1BP1-201ENST00000555221 PTGER4P35408 488 aa5.04□□□□□ -1.6
CKS1BP1-201ENST00000555221 ALDH3A2P51648 485 aa5.04□□□□□ -1.6
CKS1BP1-201ENST00000555221 ITGA7Q13683 1181 aa5.04□□□□□ -1.6
CKS1BP1-201ENST00000555221 TWISTNBQ3B726 338 aaPredicted RBP5.04□□□□□ -1.6
CKS1BP1-201ENST00000555221 C1QTNF12Q5T7M4 302 aa5.04□□□□□ -1.6
CKS1BP1-201ENST00000555221 FAM91A1Q658Y4 838 aa5.04□□□□□ -1.6
CKS1BP1-201ENST00000555221 ENPP7Q6UWV6 458 aa5.04□□□□□ -1.6
CKS1BP1-201ENST00000555221 C9orf139Q6ZV77 190 aa5.04□□□□□ -1.6
CKS1BP1-201ENST00000555221 RYBPQ8N488 228 aaPredicted RBP5.04□□□□□ -1.6
CKS1BP1-201ENST00000555221 FGFBP3Q8TAT2 258 aa5.04□□□□□ -1.6
CKS1BP1-201ENST00000555221 HES6Q96HZ4 224 aa5.04□□□□□ -1.6
CKS1BP1-201ENST00000555221 ST6GAL2Q96JF0 529 aa5.04□□□□□ -1.6
CKS1BP1-201ENST00000555221 PKP4Q99569 1192 aa5.04□□□□□ -1.6
CKS1BP1-201ENST00000555221 KATNB1Q9BVA0 655 aa5.04□□□□□ -1.6
CKS1BP1-201ENST00000555221 MIS12Q9H081 205 aa5.04□□□□□ -1.6
CKS1BP1-201ENST00000555221 ZNF701Q9NV72 531 aaPredicted RBP5.04□□□□□ -1.6
CKS1BP1-201ENST00000555221 COQ3Q9NZJ6 369 aa5.04□□□□□ -1.6
CKS1BP1-201ENST00000555221 ZDHHC2Q9UIJ5 367 aa5.04□□□□□ -1.6
CKS1BP1-201ENST00000555221 A0A1W2PN81 502 aa5.03□□□□□ -1.6
CKS1BP1-201ENST00000555221 MOCS3O95396 460 aa5.03□□□□□ -1.6
CKS1BP1-201ENST00000555221 F7P08709 466 aaPredicted RBP5.03□□□□□ -1.6
CKS1BP1-201ENST00000555221 HSPA8P11142 646 aaKnown RBP5.03□□□□□ -1.6
CKS1BP1-201ENST00000555221 ADRA2CP18825 462 aa5.03□□□□□ -1.6
CKS1BP1-201ENST00000555221 CASTP20810 708 aaKnown RBP5.03□□□□□ -1.6
CKS1BP1-201ENST00000555221 EPHA2P29317 976 aa5.03□□□□□ -1.6
CKS1BP1-201ENST00000555221 CHRNA7P36544 502 aa5.03□□□□□ -1.6
CKS1BP1-201ENST00000555221 MNDAP41218 407 aa5.03□□□□□ -1.6
CKS1BP1-201ENST00000555221 TNNT3P45378 269 aaPredicted RBP5.03□□□□□ -1.6
CKS1BP1-201ENST00000555221 DLK1P80370 383 aa5.03□□□□□ -1.6
CKS1BP1-201ENST00000555221 DMPKQ09013 629 aa5.03□□□□□ -1.6
CKS1BP1-201ENST00000555221 TUBB2AQ13885 445 aa5.03□□□□□ -1.6
CKS1BP1-201ENST00000555221 CA9Q16790 459 aa5.03□□□□□ -1.6
CKS1BP1-201ENST00000555221 MCMDC2Q4G0Z9 681 aa5.03□□□□□ -1.6
CKS1BP1-201ENST00000555221 SHEQ5VZ18 495 aa5.03□□□□□ -1.6
CKS1BP1-201ENST00000555221 KIAA1161Q6NSJ0 714 aa5.03□□□□□ -1.6
CKS1BP1-201ENST00000555221 GDPD4Q6W3E5 623 aa5.03□□□□□ -1.6
CKS1BP1-201ENST00000555221 THAP8Q8NA92 274 aa5.03□□□□□ -1.6
CKS1BP1-201ENST00000555221 KBTBD3Q8NAB2 608 aa5.03□□□□□ -1.6
CKS1BP1-201ENST00000555221 OR1J1Q8NGS3 322 aa5.03□□□□□ -1.6
CKS1BP1-201ENST00000555221 KCNE4Q8WWG9 221 aa5.03□□□□□ -1.6
CKS1BP1-201ENST00000555221 THOC1Q96FV9 657 aaKnown RBP5.03□□□□□ -1.6
CKS1BP1-201ENST00000555221 VMP1Q96GC9 406 aa5.03□□□□□ -1.6
CKS1BP1-201ENST00000555221 CCDC114Q96M63 670 aa5.03□□□□□ -1.6
CKS1BP1-201ENST00000555221 FNBP1Q96RU3 617 aa5.03□□□□□ -1.6
CKS1BP1-201ENST00000555221 INPP5KQ9BT40 448 aa5.03□□□□□ -1.6
CKS1BP1-201ENST00000555221 TUBB2BQ9BVA1 445 aa5.03□□□□□ -1.6
CKS1BP1-201ENST00000555221 GTPBP2Q9BX10 602 aaKnown RBP5.03□□□□□ -1.6
CKS1BP1-201ENST00000555221 TFB2MQ9H5Q4 396 aaKnown RBP5.03□□□□□ -1.6
CKS1BP1-201ENST00000555221 XAB2Q9HCS7 855 aaKnown RBP5.03□□□□□ -1.6
CKS1BP1-201ENST00000555221 ECHDC1Q9NTX5 307 aa5.03□□□□□ -1.6
CKS1BP1-201ENST00000555221 TXNDC16Q9P2K2 825 aa5.03□□□□□ -1.6
CKS1BP1-201ENST00000555221 TRIM17Q9Y577 477 aa5.03□□□□□ -1.6
CKS1BP1-201ENST00000555221 ENO4A6NNW6 628 aa5.02□□□□□ -1.61
CKS1BP1-201ENST00000555221 PI4K2BG5E9Z4 385 aa5.02□□□□□ -1.61
CKS1BP1-201ENST00000555221 PLOD2O00469 737 aa5.02□□□□□ -1.61
CKS1BP1-201ENST00000555221 PSMD14O00487 310 aa5.02□□□□□ -1.61
CKS1BP1-201ENST00000555221 STX6O43752 255 aa5.02□□□□□ -1.61
CKS1BP1-201ENST00000555221 KRT36O76013 467 aa5.02□□□□□ -1.61
CKS1BP1-201ENST00000555221 LUC7L3O95232 432 aaKnown RBP5.02□□□□□ -1.61
CKS1BP1-201ENST00000555221 PIGNO95427 931 aa5.02□□□□□ -1.61
CKS1BP1-201ENST00000555221 NR3C1P04150 777 aa5.02□□□□□ -1.61
CKS1BP1-201ENST00000555221 VIMP08670 466 aaKnown RBP5.02□□□□□ -1.61
CKS1BP1-201ENST00000555221 IRF2P14316 349 aa5.02□□□□□ -1.61
CKS1BP1-201ENST00000555221 GNAZP19086 355 aa5.02□□□□□ -1.61
CKS1BP1-201ENST00000555221 MUTP22033 750 aa5.02□□□□□ -1.61
Retrieved 100 of 20,778 RNA–protein pairs in 34.1 ms