RNA–Protein interactions for RNA: ENST00000555002.5

SYNE2-216, Transcript of spectrin repeat containing nuclear envelope protein 2, humanhuman

TSL 1 (best) BASIC

Gene SYNE2, Length 11,532 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SYNE2-216ENST00000555002 SIDT2Q8NBJ9 832 aaKnown RBP6.77□□□□□ -1.33
SYNE2-216ENST00000555002 ZNF649Q9BS31 505 aa6.77□□□□□ -1.33
SYNE2-216ENST00000555002 IFT80Q9P2H3 777 aaPredicted RBP6.77□□□□□ -1.33
SYNE2-216ENST00000555002 ARID1AO14497 2285 aa6.77□□□□□ -1.33
SYNE2-216ENST00000555002 YDJCA8MPS7 323 aa6.77□□□□□ -1.33
SYNE2-216ENST00000555002 NDUFS4O43181 175 aa6.77□□□□□ -1.33
SYNE2-216ENST00000555002 PRLP01236 227 aa6.77□□□□□ -1.33
SYNE2-216ENST00000555002 AIMP2Q13155 320 aaKnown RBP6.77□□□□□ -1.33
SYNE2-216ENST00000555002 LAPTM5Q13571 262 aa6.77□□□□□ -1.33
SYNE2-216ENST00000555002 CD99L2Q8TCZ2 262 aa6.77□□□□□ -1.33
SYNE2-216ENST00000555002 HEXDCQ8WVB3 486 aa6.77□□□□□ -1.33
SYNE2-216ENST00000555002 KCNC2Q96PR1 638 aa6.77□□□□□ -1.33
SYNE2-216ENST00000555002 CDH19Q9H159 772 aa6.77□□□□□ -1.33
SYNE2-216ENST00000555002 CRTAC1Q9NQ79 661 aa6.77□□□□□ -1.33
SYNE2-216ENST00000555002 CHST7Q9NS84 486 aa6.77□□□□□ -1.33
SYNE2-216ENST00000555002 TBC1D14Q9P2M4 693 aa6.77□□□□□ -1.33
SYNE2-216ENST00000555002 ABCG2Q9UNQ0 655 aa6.77□□□□□ -1.33
SYNE2-216ENST00000555002 MAN2B2Q9Y2E5 1009 aa6.77□□□□□ -1.33
SYNE2-216ENST00000555002 FCF1Q9Y324 198 aaKnown RBP6.77□□□□□ -1.33
SYNE2-216ENST00000555002 CNTNAP1P78357 1384 aa6.77□□□□□ -1.33
SYNE2-216ENST00000555002 BCAS1O75363 584 aaPredicted RBP6.77□□□□□ -1.33
SYNE2-216ENST00000555002 PITPNAQ00169 270 aa6.77□□□□□ -1.33
SYNE2-216ENST00000555002 SNTA1Q13424 505 aa6.77□□□□□ -1.33
SYNE2-216ENST00000555002 NMUR1Q9HB89 426 aa6.77□□□□□ -1.33
SYNE2-216ENST00000555002 LRRIQ1Q96JM4 1722 aa6.77□□□□□ -1.33
SYNE2-216ENST00000555002 INO80Q9ULG1 1556 aaPredicted RBP6.77□□□□□ -1.33
SYNE2-216ENST00000555002 ANKRD63C9JTQ0 380 aa6.76□□□□□ -1.33
SYNE2-216ENST00000555002 SHBGP04278 402 aa6.76□□□□□ -1.33
SYNE2-216ENST00000555002 NAA20P61599 178 aa6.76□□□□□ -1.33
SYNE2-216ENST00000555002 ADAM17P78536 824 aa6.76□□□□□ -1.33
SYNE2-216ENST00000555002 RHEBQ15382 184 aa6.76□□□□□ -1.33
SYNE2-216ENST00000555002 OR8K3Q8NH51 312 aa6.76□□□□□ -1.33
SYNE2-216ENST00000555002 CAVIN3Q969G5 261 aa6.76□□□□□ -1.33
SYNE2-216ENST00000555002 MKKSQ9NPJ1 570 aaPredicted RBP6.76□□□□□ -1.33
SYNE2-216ENST00000555002 LRRC7Q96NW7 1537 aa6.76□□□□□ -1.33
SYNE2-216ENST00000555002 ILVBLA1L0T0 632 aa6.76□□□□□ -1.33
SYNE2-216ENST00000555002 LGR5O75473 907 aa6.76□□□□□ -1.33
SYNE2-216ENST00000555002 CLDN9O95484 217 aa6.76□□□□□ -1.33
SYNE2-216ENST00000555002 HEXBP07686 556 aa6.76□□□□□ -1.33
SYNE2-216ENST00000555002 OR4Q2P0C623 313 aa6.76□□□□□ -1.33
SYNE2-216ENST00000555002 MAPTP10636 758 aaKnown RBP6.76□□□□□ -1.33
SYNE2-216ENST00000555002 BCKDHAP12694 445 aa6.76□□□□□ -1.33
SYNE2-216ENST00000555002 GANABQ14697 944 aaKnown RBP6.76□□□□□ -1.33
SYNE2-216ENST00000555002 TMEM35AQ53FP2 167 aa6.76□□□□□ -1.33
SYNE2-216ENST00000555002 SLC16A9Q7RTY1 509 aa6.76□□□□□ -1.33
SYNE2-216ENST00000555002 PDPRQ8NCN5 879 aa6.76□□□□□ -1.33
SYNE2-216ENST00000555002 OR8S1Q8NH09 359 aa6.76□□□□□ -1.33
SYNE2-216ENST00000555002 NXNL1Q96CM4 212 aa6.76□□□□□ -1.33
SYNE2-216ENST00000555002 CARS2Q9HA77 564 aaKnown RBP6.76□□□□□ -1.33
SYNE2-216ENST00000555002 TMEM165Q9HC07 324 aa6.76□□□□□ -1.33
SYNE2-216ENST00000555002 RAB26Q9ULW5 256 aa6.76□□□□□ -1.33
SYNE2-216ENST00000555002 REREQ9P2R6 1566 aa6.76□□□□□ -1.33
SYNE2-216ENST00000555002 A0A0J9YYE9 177 aa6.76□□□□□ -1.33
SYNE2-216ENST00000555002 HTR3EA5X5Y0 456 aa6.76□□□□□ -1.33
SYNE2-216ENST00000555002 STK16O75716 305 aa6.76□□□□□ -1.33
SYNE2-216ENST00000555002 APOL3O95236 402 aa6.76□□□□□ -1.33
SYNE2-216ENST00000555002 GP1BBP13224 206 aa6.76□□□□□ -1.33
SYNE2-216ENST00000555002 CYP2C18P33260 490 aa6.76□□□□□ -1.33
SYNE2-216ENST00000555002 GBX2P52951 348 aaPredicted RBP6.76□□□□□ -1.33
SYNE2-216ENST00000555002 CDH15P55291 814 aa6.76□□□□□ -1.33
SYNE2-216ENST00000555002 CTBP2P56545 445 aa6.76□□□□□ -1.33
SYNE2-216ENST00000555002 OLR1P78380 273 aa6.76□□□□□ -1.33
SYNE2-216ENST00000555002 ATXN7L3Q14CW9 347 aaPredicted RBP6.76□□□□□ -1.33
SYNE2-216ENST00000555002 RBM48Q5RL73 367 aaKnown RBP6.76□□□□□ -1.33
SYNE2-216ENST00000555002 SLC38A4Q969I6 547 aa6.76□□□□□ -1.33
SYNE2-216ENST00000555002 ZCCHC11Q5TAX3 1644 aaKnown RBP6.76□□□□□ -1.33
SYNE2-216ENST00000555002 MYCLP1P12525 358 aaPredicted RBP6.76□□□□□ -1.33
SYNE2-216ENST00000555002 IRF2P14316 349 aa6.76□□□□□ -1.33
SYNE2-216ENST00000555002 SLC3A1Q07837 685 aa6.76□□□□□ -1.33
SYNE2-216ENST00000555002 TTMPQ5BVD1 217 aa6.76□□□□□ -1.33
SYNE2-216ENST00000555002 PIGZQ86VD9 579 aa6.76□□□□□ -1.33
SYNE2-216ENST00000555002 CYB5D2Q8WUJ1 264 aa6.76□□□□□ -1.33
SYNE2-216ENST00000555002 SAT2Q96F10 170 aaPredicted RBP6.76□□□□□ -1.33
SYNE2-216ENST00000555002 NECAB3Q96P71 396 aaPredicted RBP6.76□□□□□ -1.33
SYNE2-216ENST00000555002 MTERF1Q99551 399 aaKnown RBP6.76□□□□□ -1.33
SYNE2-216ENST00000555002 ADAP2Q9NPF8 381 aa6.76□□□□□ -1.33
SYNE2-216ENST00000555002 C14orf105Q9NVL8 296 aa6.76□□□□□ -1.33
SYNE2-216ENST00000555002 ZNF521Q96K83 1311 aa6.76□□□□□ -1.33
SYNE2-216ENST00000555002 TTC3P53804 2025 aa6.76□□□□□ -1.33
SYNE2-216ENST00000555002 BORCS7-ASMTA0A0B4J1R7 106 aa6.76□□□□□ -1.33
SYNE2-216ENST00000555002 SLC15A5A6NIM6 579 aa6.76□□□□□ -1.33
SYNE2-216ENST00000555002 HHLA1C9JL84 531 aa6.76□□□□□ -1.33
SYNE2-216ENST00000555002 DHX15O43143 795 aaKnown RBP6.76□□□□□ -1.33
SYNE2-216ENST00000555002 GNB3P16520 340 aa6.76□□□□□ -1.33
SYNE2-216ENST00000555002 BLKP51451 505 aa6.76□□□□□ -1.33
SYNE2-216ENST00000555002 TARDBPQ13148 414 aaKnown RBP eCLIP6.76□□□□□ -1.33
SYNE2-216ENST00000555002 ESPL1Q14674 2120 aa6.76□□□□□ -1.33
SYNE2-216ENST00000555002 KANK2Q63ZY3 851 aa6.76□□□□□ -1.33
SYNE2-216ENST00000555002 OR2T34Q8NGX1 318 aa6.76□□□□□ -1.33
SYNE2-216ENST00000555002 OR2T3Q8NH03 318 aa6.76□□□□□ -1.33
SYNE2-216ENST00000555002 LMX1AQ8TE12 382 aa6.76□□□□□ -1.33
SYNE2-216ENST00000555002 MR1Q95460 341 aa6.76□□□□□ -1.33
SYNE2-216ENST00000555002 BORCS7Q96B45 105 aa6.76□□□□□ -1.33
SYNE2-216ENST00000555002 TREX2Q9BQ50 279 aaPredicted RBP6.76□□□□□ -1.33
SYNE2-216ENST00000555002 DNAJC18Q9H819 358 aa6.76□□□□□ -1.33
SYNE2-216ENST00000555002 NOP16Q9Y3C1 178 aaKnown RBP6.76□□□□□ -1.33
SYNE2-216ENST00000555002 TRAF6Q9Y4K3 522 aa6.76□□□□□ -1.33
SYNE2-216ENST00000555002 MYH7BA7E2Y1 1941 aa6.76□□□□□ -1.33
SYNE2-216ENST00000555002 ZMYM2Q9UBW7 1377 aa6.76□□□□□ -1.33
SYNE2-216ENST00000555002 CNTNAP4Q9C0A0 1308 aa6.76□□□□□ -1.33
Retrieved 100 of 20,778 RNA–protein pairs in 27.2 ms