RNA–Protein interactions for RNA: ENST00000554813.5

APEX1-208, Transcript of apurinic/apyrimidinic endodeoxyribonuclease 1, human

TSL 3

Gene APEX1, Length 654 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
APEX1-208	ENST00000554813	VASH2	Q86V25	355 aa		12.81	□□□□□ -0.36
APEX1-208	ENST00000554813	ESX1	Q8N693	406 aa		12.81	□□□□□ -0.36
APEX1-208	ENST00000554813	C2CD4A	Q8NCU7	369 aa	Predicted RBP	12.81	□□□□□ -0.36
APEX1-208	ENST00000554813	KCNJ9	Q92806	393 aa		12.81	□□□□□ -0.36
APEX1-208	ENST00000554813	INPP5D	Q92835	1189 aa		12.81	□□□□□ -0.36
APEX1-208	ENST00000554813	KIAA1143	Q96AT1	154 aa	Predicted RBP	12.81	□□□□□ -0.36
APEX1-208	ENST00000554813	CERS2	Q96G23	380 aa		12.81	□□□□□ -0.36
APEX1-208	ENST00000554813	CFAP36	Q96G28	342 aa		12.81	□□□□□ -0.36
APEX1-208	ENST00000554813	C16orf45	Q96MC5	204 aa	Predicted RBP	12.81	□□□□□ -0.36
APEX1-208	ENST00000554813	PWWP2A	Q96N64	755 aa		12.81	□□□□□ -0.36
APEX1-208	ENST00000554813	TRAPPC9	Q96Q05	1148 aa		12.81	□□□□□ -0.36
APEX1-208	ENST00000554813	OR2A14	Q96R47	310 aa		12.81	□□□□□ -0.36
APEX1-208	ENST00000554813	EFHD1	Q9BUP0	239 aa		12.81	□□□□□ -0.36
APEX1-208	ENST00000554813	RAB11FIP5	Q9BXF6	653 aa		12.81	□□□□□ -0.36
APEX1-208	ENST00000554813	FANCE	Q9HB96	536 aa		12.81	□□□□□ -0.36
APEX1-208	ENST00000554813	WHRN	Q9P202	907 aa		12.81	□□□□□ -0.36
APEX1-208	ENST00000554813	GALP	Q9UBC7	116 aa		12.81	□□□□□ -0.36
APEX1-208	ENST00000554813	PLAGL1	Q9UM63	463 aa		12.81	□□□□□ -0.36
APEX1-208	ENST00000554813	CHMP2B	Q9UQN3	213 aa		12.81	□□□□□ -0.36
APEX1-208	ENST00000554813	UTP11	Q9Y3A2	253 aa	Known RBP	12.81	□□□□□ -0.36
APEX1-208	ENST00000554813	ZFHX4	Q86UP3	3567 aa		12.81	□□□□□ -0.36
APEX1-208	ENST00000554813	CHD6	Q8TD26	2715 aa		12.8	□□□□□ -0.36
APEX1-208	ENST00000554813	RASGRF2	O14827	1237 aa		12.8	□□□□□ -0.36
APEX1-208	ENST00000554813	TP73	O15350	636 aa		12.8	□□□□□ -0.36
APEX1-208	ENST00000554813	RAD51C	O43502	376 aa		12.8	□□□□□ -0.36
APEX1-208	ENST00000554813	VPS26A	O75436	327 aa		12.8	□□□□□ -0.36
APEX1-208	ENST00000554813	URI1	O94763	535 aa	Predicted RBP	12.8	□□□□□ -0.36
APEX1-208	ENST00000554813	KIAA0754	O94854	1291 aa		12.8	□□□□□ -0.36
APEX1-208	ENST00000554813	DLGAP3	O95886	979 aa		12.8	□□□□□ -0.36
APEX1-208	ENST00000554813	MT-ND3	P03897	115 aa		12.8	□□□□□ -0.36
APEX1-208	ENST00000554813	MSL3P1	P0C860	447 aa		12.8	□□□□□ -0.36
APEX1-208	ENST00000554813	PKLR	P30613	574 aa		12.8	□□□□□ -0.36
APEX1-208	ENST00000554813	SKIV2L2	P42285	1042 aa	Known RBP	12.8	□□□□□ -0.36
APEX1-208	ENST00000554813	CARS	P49589	748 aa	Known RBP	12.8	□□□□□ -0.36
APEX1-208	ENST00000554813	CLCN7	P51798	805 aa		12.8	□□□□□ -0.36
APEX1-208	ENST00000554813	MRPS25	P82663	173 aa	Known RBP	12.8	□□□□□ -0.36
APEX1-208	ENST00000554813	MPP1	Q00013	466 aa		12.8	□□□□□ -0.36
APEX1-208	ENST00000554813	RHD	Q02161	417 aa		12.8	□□□□□ -0.36
APEX1-208	ENST00000554813	ABHD18	Q0P651	414 aa		12.8	□□□□□ -0.36
APEX1-208	ENST00000554813	PDIA2	Q13087	525 aa	Known RBP	12.8	□□□□□ -0.36
APEX1-208	ENST00000554813	GPR19	Q15760	415 aa		12.8	□□□□□ -0.36
APEX1-208	ENST00000554813	KLHL38	Q2WGJ6	581 aa		12.8	□□□□□ -0.36
APEX1-208	ENST00000554813	ACSBG2	Q5FVE4	666 aa		12.8	□□□□□ -0.36
APEX1-208	ENST00000554813	UGT3A1	Q6NUS8	523 aa		12.8	□□□□□ -0.36
APEX1-208	ENST00000554813	ZNF549	Q6P9A3	640 aa		12.8	□□□□□ -0.36
APEX1-208	ENST00000554813	CNST	Q6PJW8	725 aa		12.8	□□□□□ -0.36
APEX1-208	ENST00000554813	NEK10	Q6ZWH5	1172 aa		12.8	□□□□□ -0.36
APEX1-208	ENST00000554813	TIPARP	Q7Z3E1	657 aa	Known RBP	12.8	□□□□□ -0.36
APEX1-208	ENST00000554813	ZNF572	Q7Z3I7	529 aa	Predicted RBP	12.8	□□□□□ -0.36
APEX1-208	ENST00000554813	CNTN4	Q8IWV2	1026 aa		12.8	□□□□□ -0.36
APEX1-208	ENST00000554813	OR2L8	Q8NGY9	312 aa		12.8	□□□□□ -0.36
APEX1-208	ENST00000554813	TCTN2	Q96GX1	697 aa		12.8	□□□□□ -0.36
APEX1-208	ENST00000554813	UBL7	Q96S82	380 aa	Predicted RBP	12.8	□□□□□ -0.36
APEX1-208	ENST00000554813	RAB17	Q9H0T7	212 aa		12.8	□□□□□ -0.36
APEX1-208	ENST00000554813	SPHK1	Q9NYA1	384 aa		12.8	□□□□□ -0.36
APEX1-208	ENST00000554813	LNPEP	Q9UIQ6	1025 aa		12.8	□□□□□ -0.36
APEX1-208	ENST00000554813	SERTAD3	Q9UJW9	196 aa		12.8	□□□□□ -0.36
APEX1-208	ENST00000554813	CDC23	Q9UJX2	597 aa		12.8	□□□□□ -0.36
APEX1-208	ENST00000554813	DHRS7	Q9Y394	339 aa		12.8	□□□□□ -0.36
APEX1-208	ENST00000554813	NFS1	Q9Y697	457 aa		12.8	□□□□□ -0.36
APEX1-208	ENST00000554813	SDK2	Q58EX2	2172 aa		12.8	□□□□□ -0.36
APEX1-208	ENST00000554813	AHCTF1	Q8WYP5	2266 aa		12.79	□□□□□ -0.36
APEX1-208	ENST00000554813		A0A0J9YY10	115 aa		12.79	□□□□□ -0.36
APEX1-208	ENST00000554813	AHSG	P02765	367 aa		12.79	□□□□□ -0.36
APEX1-208	ENST00000554813	CAT	P04040	527 aa	Known RBP	12.79	□□□□□ -0.36
APEX1-208	ENST00000554813	CBSL	P0DN79	551 aa		12.79	□□□□□ -0.36
APEX1-208	ENST00000554813	ENO3	P13929	434 aa	Predicted RBP	12.79	□□□□□ -0.36
APEX1-208	ENST00000554813	ST6GAL1	P15907	406 aa		12.79	□□□□□ -0.36
APEX1-208	ENST00000554813	ZNF28	P17035	718 aa		12.79	□□□□□ -0.36
APEX1-208	ENST00000554813	CBS	P35520	551 aa		12.79	□□□□□ -0.36
APEX1-208	ENST00000554813	CAV1	Q03135	178 aa		12.79	□□□□□ -0.36
APEX1-208	ENST00000554813	CBLB	Q13191	982 aa		12.79	□□□□□ -0.36
APEX1-208	ENST00000554813	SRSF6	Q13247	344 aa	Known RBP	12.79	□□□□□ -0.36
APEX1-208	ENST00000554813	FRG1	Q14331	258 aa	Known RBP	12.79	□□□□□ -0.36
APEX1-208	ENST00000554813	GRB7	Q14451	532 aa		12.79	□□□□□ -0.36
APEX1-208	ENST00000554813	SLC5A12	Q1EHB4	618 aa		12.79	□□□□□ -0.36
APEX1-208	ENST00000554813	TEDDM1	Q5T9Z0	273 aa		12.79	□□□□□ -0.36
APEX1-208	ENST00000554813	STEAP4	Q687X5	459 aa		12.79	□□□□□ -0.36
APEX1-208	ENST00000554813	DUPD1	Q68J44	220 aa		12.79	□□□□□ -0.36
APEX1-208	ENST00000554813	PWWP2B	Q6NUJ5	590 aa		12.79	□□□□□ -0.36
APEX1-208	ENST00000554813	GALNT7	Q86SF2	657 aa		12.79	□□□□□ -0.36
APEX1-208	ENST00000554813	TMEM126B	Q8IUX1	230 aa		12.79	□□□□□ -0.36
APEX1-208	ENST00000554813	ANKMY2	Q8IV38	441 aa		12.79	□□□□□ -0.36
APEX1-208	ENST00000554813	GALNT6	Q8NCL4	622 aa		12.79	□□□□□ -0.36
APEX1-208	ENST00000554813	ZNF592	Q92610	1267 aa		12.79	□□□□□ -0.36
APEX1-208	ENST00000554813	N4BP2L2	Q92802	583 aa	Predicted RBP	12.79	□□□□□ -0.36
APEX1-208	ENST00000554813	ZNF501	Q96CX3	271 aa	Predicted RBP	12.79	□□□□□ -0.36
APEX1-208	ENST00000554813	TRIM44	Q96DX7	344 aa	Predicted RBP	12.79	□□□□□ -0.36
APEX1-208	ENST00000554813	GPR21	Q99679	349 aa		12.79	□□□□□ -0.36
APEX1-208	ENST00000554813	AARSD1	Q9BTE6	412 aa	Known RBP	12.79	□□□□□ -0.36
APEX1-208	ENST00000554813	MENT	Q9BUN1	341 aa		12.79	□□□□□ -0.36
APEX1-208	ENST00000554813	TWSG1	Q9GZX9	223 aa		12.79	□□□□□ -0.36
APEX1-208	ENST00000554813	KLHL25	Q9H0H3	589 aa		12.79	□□□□□ -0.36
APEX1-208	ENST00000554813	DPH5	Q9H2P9	285 aa		12.79	□□□□□ -0.36
APEX1-208	ENST00000554813	GPN2	Q9H9Y4	310 aa	Predicted RBP	12.79	□□□□□ -0.36
APEX1-208	ENST00000554813	FAM114A2	Q9NRY5	505 aa		12.79	□□□□□ -0.36
APEX1-208	ENST00000554813	TAS2R13	Q9NYV9	303 aa		12.79	□□□□□ -0.36
APEX1-208	ENST00000554813	CIDEB	Q9UHD4	219 aa		12.79	□□□□□ -0.36
APEX1-208	ENST00000554813	TSR3	Q9UJK0	312 aa	Known RBP	12.79	□□□□□ -0.36
APEX1-208	ENST00000554813	RALY	Q9UKM9	306 aa	Known RBP	12.79	□□□□□ -0.36

Retrieved 100 of 20,778 RNA–protein pairs in 31.3 ms