RNA–Protein interactions for RNA: ENST00000554508.5

ACTN1-213, Transcript of actinin alpha 1, humanhuman

TSL 4

Gene ACTN1, Length 585 nt, Biotype processed transcript, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ACTN1-213ENST00000554508 SAMD15Q9P1V8 674 aa8.44□□□□□ -1.06
ACTN1-213ENST00000554508 MARCH4Q9P2E8 410 aaPredicted RBP8.44□□□□□ -1.06
ACTN1-213ENST00000554508 CDYLQ9Y232 598 aa8.44□□□□□ -1.06
ACTN1-213ENST00000554508 POLHQ9Y253 713 aa8.44□□□□□ -1.06
ACTN1-213ENST00000554508 FARSAQ9Y285 508 aaKnown RBP8.44□□□□□ -1.06
ACTN1-213ENST00000554508 VPS9D1Q9Y2B5 631 aa8.44□□□□□ -1.06
ACTN1-213ENST00000554508 HEMK1Q9Y5R4 338 aaPredicted RBP8.44□□□□□ -1.06
ACTN1-213ENST00000554508 MRPS18BQ9Y676 258 aaKnown RBP8.44□□□□□ -1.06
ACTN1-213ENST00000554508 MDC1Q14676 2089 aaKnown RBP8.43□□□□□ -1.06
ACTN1-213ENST00000554508 A0A0J9YY10 115 aa8.43□□□□□ -1.06
ACTN1-213ENST00000554508 FAM237BA0A1B0GVD1 139 aa8.43□□□□□ -1.06
ACTN1-213ENST00000554508 SDR42E2A6NKP2 422 aa8.43□□□□□ -1.06
ACTN1-213ENST00000554508 IQCF5A8MTL0 148 aa8.43□□□□□ -1.06
ACTN1-213ENST00000554508 ISM1B1AKI9 464 aa8.43□□□□□ -1.06
ACTN1-213ENST00000554508 TMEM150CB9EJG8 249 aa8.43□□□□□ -1.06
ACTN1-213ENST00000554508 E7EQ34 232 aa8.43□□□□□ -1.06
ACTN1-213ENST00000554508 CCDC188H7C350 402 aa8.43□□□□□ -1.06
ACTN1-213ENST00000554508 J3QKU1 62 aa8.43□□□□□ -1.06
ACTN1-213ENST00000554508 MEN1O00255 615 aa8.43□□□□□ -1.06
ACTN1-213ENST00000554508 AVILO75366 819 aa8.43□□□□□ -1.06
ACTN1-213ENST00000554508 RAB40ALP0C0E4 278 aa8.43□□□□□ -1.06
ACTN1-213ENST00000554508 TPBGLP0DKB5 382 aa8.43□□□□□ -1.06
ACTN1-213ENST00000554508 UGT2B7P16662 529 aa8.43□□□□□ -1.06
ACTN1-213ENST00000554508 OGNP20774 298 aaKnown RBP8.43□□□□□ -1.06
ACTN1-213ENST00000554508 CYP2A7P20853 494 aa8.43□□□□□ -1.06
ACTN1-213ENST00000554508 ARNTP27540 789 aa8.43□□□□□ -1.06
ACTN1-213ENST00000554508 PTPN4P29074 926 aa8.43□□□□□ -1.06
ACTN1-213ENST00000554508 PKLRP30613 574 aa8.43□□□□□ -1.06
ACTN1-213ENST00000554508 FNTAP49354 379 aa8.43□□□□□ -1.06
ACTN1-213ENST00000554508 VPS41P49754 854 aa8.43□□□□□ -1.06
ACTN1-213ENST00000554508 RAB28P51157 221 aa8.43□□□□□ -1.06
ACTN1-213ENST00000554508 EIF3BP55884 814 aaKnown RBP8.43□□□□□ -1.06
ACTN1-213ENST00000554508 CKAP4Q07065 602 aaKnown RBP8.43□□□□□ -1.06
ACTN1-213ENST00000554508 NFATC3Q12968 1075 aa8.43□□□□□ -1.06
ACTN1-213ENST00000554508 ABRQ12979 859 aa8.43□□□□□ -1.06
ACTN1-213ENST00000554508 GPS2Q13227 327 aa8.43□□□□□ -1.06
ACTN1-213ENST00000554508 ERV3-1Q14264 604 aa8.43□□□□□ -1.06
ACTN1-213ENST00000554508 PPP1R7Q15435 360 aa8.43□□□□□ -1.06
ACTN1-213ENST00000554508 TYSND1Q2T9J0 566 aa8.43□□□□□ -1.06
ACTN1-213ENST00000554508 IZUMO3Q5VZ72 239 aa8.43□□□□□ -1.06
ACTN1-213ENST00000554508 CASC4Q6P4E1 433 aa8.43□□□□□ -1.06
ACTN1-213ENST00000554508 FAM199XQ6PEV8 388 aaPredicted RBP8.43□□□□□ -1.06
ACTN1-213ENST00000554508 CES3Q6UWW8 571 aa8.43□□□□□ -1.06
ACTN1-213ENST00000554508 OTOAQ7RTW8 1153 aa8.43□□□□□ -1.06
ACTN1-213ENST00000554508 SYVN1Q86TM6 617 aa8.43□□□□□ -1.06
ACTN1-213ENST00000554508 CAND1Q86VP6 1230 aaKnown RBP8.43□□□□□ -1.06
ACTN1-213ENST00000554508 VRK3Q8IV63 474 aa8.43□□□□□ -1.06
ACTN1-213ENST00000554508 DCUN1D3Q8IWE4 304 aa8.43□□□□□ -1.06
ACTN1-213ENST00000554508 GPR135Q8IZ08 494 aa8.43□□□□□ -1.06
ACTN1-213ENST00000554508 DSELQ8IZU8 1212 aa8.43□□□□□ -1.06
ACTN1-213ENST00000554508 KRT222Q8N1A0 295 aa8.43□□□□□ -1.06
ACTN1-213ENST00000554508 C19orf47Q8N9M1 422 aaKnown RBP8.43□□□□□ -1.06
ACTN1-213ENST00000554508 OR1L3Q8NH93 324 aa8.43□□□□□ -1.06
ACTN1-213ENST00000554508 CFAP61Q8NHU2 1237 aa8.43□□□□□ -1.06
ACTN1-213ENST00000554508 FLVCR1-AS1Q8TAF5 88 aa8.43□□□□□ -1.06
ACTN1-213ENST00000554508 LKAAEAR1Q8TD35 194 aa8.43□□□□□ -1.06
ACTN1-213ENST00000554508 MAGEC3Q8TD91 643 aa8.43□□□□□ -1.06
ACTN1-213ENST00000554508 N4BP2L2Q92802 583 aaPredicted RBP8.43□□□□□ -1.06
ACTN1-213ENST00000554508 SLC22A18Q96BI1 424 aa8.43□□□□□ -1.06
ACTN1-213ENST00000554508 CLIP3Q96DZ5 547 aa8.43□□□□□ -1.06
ACTN1-213ENST00000554508 RNF31Q96EP0 1072 aa8.43□□□□□ -1.06
ACTN1-213ENST00000554508 FOPNLQ96NB1 174 aa8.43□□□□□ -1.06
ACTN1-213ENST00000554508 NRTNQ99748 197 aa8.43□□□□□ -1.06
ACTN1-213ENST00000554508 DPH2Q9BQC3 489 aaPredicted RBP8.43□□□□□ -1.06
ACTN1-213ENST00000554508 SLC7A5P2Q9GIP4 190 aa8.43□□□□□ -1.06
ACTN1-213ENST00000554508 ACTR5Q9H9F9 607 aaPredicted RBP8.43□□□□□ -1.06
ACTN1-213ENST00000554508 CDC23Q9UJX2 597 aa8.43□□□□□ -1.06
ACTN1-213ENST00000554508 NEU2Q9Y3R4 380 aa8.43□□□□□ -1.06
ACTN1-213ENST00000554508 AP1M2Q9Y6Q5 423 aa8.43□□□□□ -1.06
ACTN1-213ENST00000554508 GCN1Q92616 2671 aaKnown RBP8.43□□□□□ -1.06
ACTN1-213ENST00000554508 CDC14CA4D256 554 aa8.42□□□□□ -1.06
ACTN1-213ENST00000554508 ESPNB1AK53 854 aa8.42□□□□□ -1.06
ACTN1-213ENST00000554508 SLC28A2O43868 658 aa8.42□□□□□ -1.06
ACTN1-213ENST00000554508 FKBP9O95302 570 aa8.42□□□□□ -1.06
ACTN1-213ENST00000554508 S1PR4O95977 384 aa8.42□□□□□ -1.06
ACTN1-213ENST00000554508 ESR1P03372 595 aa8.42□□□□□ -1.06
ACTN1-213ENST00000554508 PVRP15151 417 aa8.42□□□□□ -1.06
ACTN1-213ENST00000554508 CD9P21926 228 aa8.42□□□□□ -1.06
ACTN1-213ENST00000554508 FMO4P31512 558 aa8.42□□□□□ -1.06
ACTN1-213ENST00000554508 RORAP35398 523 aa8.42□□□□□ -1.06
ACTN1-213ENST00000554508 CCNFP41002 786 aa8.42□□□□□ -1.06
ACTN1-213ENST00000554508 TERF1P54274 439 aa8.42□□□□□ -1.06
ACTN1-213ENST00000554508 DR1Q01658 176 aa8.42□□□□□ -1.06
ACTN1-213ENST00000554508 C2orf54Q08AI8 447 aa8.42□□□□□ -1.06
ACTN1-213ENST00000554508 THOC5Q13769 683 aaKnown RBP8.42□□□□□ -1.06
ACTN1-213ENST00000554508 DHX34Q14147 1143 aaKnown RBP8.42□□□□□ -1.06
ACTN1-213ENST00000554508 WHAMMP3Q1A5X7 153 aa8.42□□□□□ -1.06
ACTN1-213ENST00000554508 ANKRD20A4Q4UJ75 823 aa8.42□□□□□ -1.06
ACTN1-213ENST00000554508 ZNF789Q5FWF6 425 aa8.42□□□□□ -1.06
ACTN1-213ENST00000554508 CTSL3PQ5NE16 218 aa8.42□□□□□ -1.06
ACTN1-213ENST00000554508 ANKRD22Q5VYY1 191 aa8.42□□□□□ -1.06
ACTN1-213ENST00000554508 NEPROQ6NW34 567 aa8.42□□□□□ -1.06
ACTN1-213ENST00000554508 CDHR3Q6ZTQ4 885 aa8.42□□□□□ -1.06
ACTN1-213ENST00000554508 TMEM135Q86UB9 458 aa8.42□□□□□ -1.06
ACTN1-213ENST00000554508 LMNTD2Q8IXW0 634 aa8.42□□□□□ -1.06
ACTN1-213ENST00000554508 PPIL6Q8IXY8 311 aa8.42□□□□□ -1.06
ACTN1-213ENST00000554508 RAB42Q8N4Z0 105 aa8.42□□□□□ -1.06
ACTN1-213ENST00000554508 SLC38A9Q8NBW4 561 aa8.42□□□□□ -1.06
ACTN1-213ENST00000554508 SPATA4Q8NEY3 305 aa8.42□□□□□ -1.06
ACTN1-213ENST00000554508 OR2L8Q8NGY9 312 aa8.42□□□□□ -1.06
Retrieved 100 of 20,778 RNA–protein pairs in 33.7 ms