RNA–Protein interactions for RNA: ENST00000554365.1

SPTLC2-202, Transcript of serine palmitoyltransferase long chain base subunit 2, humanhuman

TSL 2

Gene SPTLC2, Length 604 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SPTLC2-202ENST00000554365 TCTN3Q6NUS6 607 aa13.66□□□□□ -0.22
SPTLC2-202ENST00000554365 TMEM26Q6ZUK4 368 aa13.66□□□□□ -0.22
SPTLC2-202ENST00000554365 LDB1Q86U70 411 aaPredicted RBP13.66□□□□□ -0.22
SPTLC2-202ENST00000554365 TRAM1L1Q8N609 369 aa13.66□□□□□ -0.22
SPTLC2-202ENST00000554365 C2CD4AQ8NCU7 369 aaPredicted RBP13.66□□□□□ -0.22
SPTLC2-202ENST00000554365 SLC44A1Q8WWI5 657 aa13.66□□□□□ -0.22
SPTLC2-202ENST00000554365 PSMG3-AS1Q96PY0 264 aa13.66□□□□□ -0.22
SPTLC2-202ENST00000554365 CYTH2Q99418 400 aa13.66□□□□□ -0.22
SPTLC2-202ENST00000554365 FAM167BQ9BTA0 163 aa13.66□□□□□ -0.22
SPTLC2-202ENST00000554365 TMEM109Q9BVC6 243 aa13.66□□□□□ -0.22
SPTLC2-202ENST00000554365 TWSG1Q9GZX9 223 aa13.66□□□□□ -0.22
SPTLC2-202ENST00000554365 ZNF768Q9H5H4 540 aaKnown RBP13.66□□□□□ -0.22
SPTLC2-202ENST00000554365 FAM96AQ9H5X1 160 aa13.66□□□□□ -0.22
SPTLC2-202ENST00000554365 UCK1Q9HA47 277 aa13.66□□□□□ -0.22
SPTLC2-202ENST00000554365 TRIM39Q9HCM9 518 aa13.66□□□□□ -0.22
SPTLC2-202ENST00000554365 RAD18Q9NS91 495 aa13.66□□□□□ -0.22
SPTLC2-202ENST00000554365 CATSPERZQ9NTU4 200 aa13.66□□□□□ -0.22
SPTLC2-202ENST00000554365 EURLQ9NYK6 297 aa13.66□□□□□ -0.22
SPTLC2-202ENST00000554365 ZNF624Q9P2J8 865 aaPredicted RBP13.66□□□□□ -0.22
SPTLC2-202ENST00000554365 SLC23A2Q9UGH3 650 aa13.66□□□□□ -0.22
SPTLC2-202ENST00000554365 KCND3Q9UK17 655 aa13.66□□□□□ -0.22
SPTLC2-202ENST00000554365 DNAJC16Q9Y2G8 782 aa13.66□□□□□ -0.22
SPTLC2-202ENST00000554365 PIPSLA2A3N6 862 aa13.65□□□□□ -0.22
SPTLC2-202ENST00000554365 AGPSO00116 658 aa13.65□□□□□ -0.22
SPTLC2-202ENST00000554365 TOX3O15405 576 aaPredicted RBP13.65□□□□□ -0.22
SPTLC2-202ENST00000554365 KIF1CO43896 1103 aaKnown RBP13.65□□□□□ -0.22
SPTLC2-202ENST00000554365 RFPL1O75677 317 aa13.65□□□□□ -0.22
SPTLC2-202ENST00000554365 FAM155BO75949 473 aa13.65□□□□□ -0.22
SPTLC2-202ENST00000554365 S1PR4O95977 384 aa13.65□□□□□ -0.22
SPTLC2-202ENST00000554365 CCNYL3P0C7X3 344 aa13.65□□□□□ -0.22
SPTLC2-202ENST00000554365 OGNP20774 298 aaKnown RBP13.65□□□□□ -0.22
SPTLC2-202ENST00000554365 CLCNKAP51800 687 aa13.65□□□□□ -0.22
SPTLC2-202ENST00000554365 MPP1Q00013 466 aa13.65□□□□□ -0.22
SPTLC2-202ENST00000554365 CACNG1Q06432 222 aa13.65□□□□□ -0.22
SPTLC2-202ENST00000554365 ZNF844Q08AG5 666 aa13.65□□□□□ -0.22
SPTLC2-202ENST00000554365 CTBP1Q13363 440 aa13.65□□□□□ -0.22
SPTLC2-202ENST00000554365 NAB1Q13506 487 aa13.65□□□□□ -0.22
SPTLC2-202ENST00000554365 THOC5Q13769 683 aaKnown RBP13.65□□□□□ -0.22
SPTLC2-202ENST00000554365 KLHL38Q2WGJ6 581 aa13.65□□□□□ -0.22
SPTLC2-202ENST00000554365 C4orf17Q53FE4 359 aa13.65□□□□□ -0.22
SPTLC2-202ENST00000554365 ZRANB3Q5FWF4 1079 aa13.65□□□□□ -0.22
SPTLC2-202ENST00000554365 ZNF789Q5FWF6 425 aa13.65□□□□□ -0.22
SPTLC2-202ENST00000554365 CACHD1Q5VU97 1274 aa13.65□□□□□ -0.22
SPTLC2-202ENST00000554365 ZNF470Q6ECI4 717 aa13.65□□□□□ -0.22
SPTLC2-202ENST00000554365 LRIG3Q6UXM1 1119 aa13.65□□□□□ -0.22
SPTLC2-202ENST00000554365 FAM92BQ6ZTR7 304 aa13.65□□□□□ -0.22
SPTLC2-202ENST00000554365 HDXQ7Z353 690 aa13.65□□□□□ -0.22
SPTLC2-202ENST00000554365 SNX20Q7Z614 316 aa13.65□□□□□ -0.22
SPTLC2-202ENST00000554365 ADGRG6Q86SQ4 1221 aa13.65□□□□□ -0.22
SPTLC2-202ENST00000554365 LRRTM4Q86VH4 590 aa13.65□□□□□ -0.22
SPTLC2-202ENST00000554365 CILP2Q8IUL8 1156 aa13.65□□□□□ -0.22
SPTLC2-202ENST00000554365 PPM1NQ8N819 430 aa13.65□□□□□ -0.22
SPTLC2-202ENST00000554365 ZNF398Q8TD17 642 aa13.65□□□□□ -0.22
SPTLC2-202ENST00000554365 EPS8L3Q8TE67 593 aaKnown RBP13.65□□□□□ -0.22
SPTLC2-202ENST00000554365 DCAKDQ8WVC6 231 aa13.65□□□□□ -0.22
SPTLC2-202ENST00000554365 RSC1A1Q92681 617 aa13.65□□□□□ -0.22
SPTLC2-202ENST00000554365 PAFAH2Q99487 392 aa13.65□□□□□ -0.22
SPTLC2-202ENST00000554365 PPANQ9NQ55 473 aaKnown RBP13.65□□□□□ -0.22
SPTLC2-202ENST00000554365 SMOXQ9NWM0 555 aa13.65□□□□□ -0.22
SPTLC2-202ENST00000554365 FETUBQ9UGM5 382 aa13.65□□□□□ -0.22
SPTLC2-202ENST00000554365 TLK1Q9UKI8 766 aa13.65□□□□□ -0.22
SPTLC2-202ENST00000554365 FBXO5Q9UKT4 447 aa13.65□□□□□ -0.22
SPTLC2-202ENST00000554365 LRRK2Q5S007 2527 aa13.65□□□□□ -0.22
SPTLC2-202ENST00000554365 EXOC1LA0A1B0GW35 172 aa13.64□□□□□ -0.23
SPTLC2-202ENST00000554365 KMOO15229 486 aa13.64□□□□□ -0.23
SPTLC2-202ENST00000554365 MTX2O75431 263 aa13.64□□□□□ -0.23
SPTLC2-202ENST00000554365 ZNF7P17097 686 aaPredicted RBP13.64□□□□□ -0.23
SPTLC2-202ENST00000554365 ITGALP20701 1170 aa13.64□□□□□ -0.23
SPTLC2-202ENST00000554365 RPL10P27635 214 aaKnown RBP13.64□□□□□ -0.23
SPTLC2-202ENST00000554365 CD97P48960 835 aa13.64□□□□□ -0.23
SPTLC2-202ENST00000554365 DNASE1L3Q13609 305 aa13.64□□□□□ -0.23
SPTLC2-202ENST00000554365 DBN1Q16643 649 aa13.64□□□□□ -0.23
SPTLC2-202ENST00000554365 FASTKD1Q53R41 847 aaKnown RBP13.64□□□□□ -0.23
SPTLC2-202ENST00000554365 IRGCQ6NXR0 463 aa13.64□□□□□ -0.23
SPTLC2-202ENST00000554365 PACS1Q6VY07 963 aa13.64□□□□□ -0.23
SPTLC2-202ENST00000554365 GALNT7Q86SF2 657 aa13.64□□□□□ -0.23
SPTLC2-202ENST00000554365 SLC26A11Q86WA9 606 aa13.64□□□□□ -0.23
SPTLC2-202ENST00000554365 LRRC6Q86X45 466 aa13.64□□□□□ -0.23
SPTLC2-202ENST00000554365 PPP1R3BQ86XI6 285 aa13.64□□□□□ -0.23
SPTLC2-202ENST00000554365 CTAGE3PQ8IX95 158 aa13.64□□□□□ -0.23
SPTLC2-202ENST00000554365 LMNTD2Q8IXW0 634 aa13.64□□□□□ -0.23
SPTLC2-202ENST00000554365 CALML6Q8TD86 181 aa13.64□□□□□ -0.23
SPTLC2-202ENST00000554365 GLYATL1Q969I3 302 aa13.64□□□□□ -0.23
SPTLC2-202ENST00000554365 ZDHHC12Q96GR4 267 aa13.64□□□□□ -0.23
SPTLC2-202ENST00000554365 ZSCAN5AQ9BUG6 496 aa13.64□□□□□ -0.23
SPTLC2-202ENST00000554365 ASB8Q9H765 288 aa13.64□□□□□ -0.23
SPTLC2-202ENST00000554365 VIPAS39Q9H9C1 493 aa13.64□□□□□ -0.23
SPTLC2-202ENST00000554365 POT1Q9NUX5 634 aa13.64□□□□□ -0.23
SPTLC2-202ENST00000554365 ZFATQ9P243 1243 aa13.64□□□□□ -0.23
SPTLC2-202ENST00000554365 PADI1Q9ULC6 663 aa13.64□□□□□ -0.23
SPTLC2-202ENST00000554365 NBASA2RRP1 2371 aa13.63□□□□□ -0.23
SPTLC2-202ENST00000554365 IGLV3-16A0A075B6K0 115 aa13.63□□□□□ -0.23
SPTLC2-202ENST00000554365 HMX2A2RU54 273 aa13.63□□□□□ -0.23
SPTLC2-202ENST00000554365 OR52A4PA6NMU1 304 aa13.63□□□□□ -0.23
SPTLC2-202ENST00000554365 GPR89AB7ZAQ6 455 aa13.63□□□□□ -0.23
SPTLC2-202ENST00000554365 POC1B-GALNT4F8VUJ3 575 aa13.63□□□□□ -0.23
SPTLC2-202ENST00000554365 CHUKO15111 745 aa13.63□□□□□ -0.23
SPTLC2-202ENST00000554365 VPS4BO75351 444 aa13.63□□□□□ -0.23
SPTLC2-202ENST00000554365 CREG1O75629 220 aa13.63□□□□□ -0.23
SPTLC2-202ENST00000554365 DNAJB5O75953 348 aa13.63□□□□□ -0.23
Retrieved 100 of 20,778 RNA–protein pairs in 243.8 ms