RNA–Protein interactions for RNA: ENST00000554074.1

SLIRP-203, Transcript of SRA stem-loop interacting RNA binding protein, humanhuman

TSL 3

Gene SLIRP, Length 445 nt, Biotype retained intron, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SLIRP-203ENST00000554074 PDGFAP04085 211 aa6.38□□□□□ -1.39
SLIRP-203ENST00000554074 RPN2P04844 631 aa6.38□□□□□ -1.39
SLIRP-203ENST00000554074 TPBGLP0DKB5 382 aa6.38□□□□□ -1.39
SLIRP-203ENST00000554074 PVRP15151 417 aa6.38□□□□□ -1.39
SLIRP-203ENST00000554074 UGT2B7P16662 529 aa6.38□□□□□ -1.39
SLIRP-203ENST00000554074 NR1D1P20393 614 aa6.38□□□□□ -1.39
SLIRP-203ENST00000554074 VARSP26640 1264 aaKnown RBP6.38□□□□□ -1.39
SLIRP-203ENST00000554074 PTGIRP43119 386 aa6.38□□□□□ -1.39
SLIRP-203ENST00000554074 LMAN1P49257 510 aa6.38□□□□□ -1.39
SLIRP-203ENST00000554074 RAB28P51157 221 aa6.38□□□□□ -1.39
SLIRP-203ENST00000554074 SRSF1Q07955 248 aaKnown RBP eCLIP6.38□□□□□ -1.39
SLIRP-203ENST00000554074 PRKG2Q13237 762 aa6.38□□□□□ -1.39
SLIRP-203ENST00000554074 IGFBP7Q16270 282 aa6.38□□□□□ -1.39
SLIRP-203ENST00000554074 CCNG2Q16589 344 aa6.38□□□□□ -1.39
SLIRP-203ENST00000554074 SYTL3Q4VX76 610 aa6.38□□□□□ -1.39
SLIRP-203ENST00000554074 AARS2Q5JTZ9 985 aaKnown RBP6.38□□□□□ -1.39
SLIRP-203ENST00000554074 PRAMEF17Q5VTA0 474 aa6.38□□□□□ -1.39
SLIRP-203ENST00000554074 CPZQ66K79 652 aa6.38□□□□□ -1.39
SLIRP-203ENST00000554074 LCN10Q6JVE6 187 aa6.38□□□□□ -1.39
SLIRP-203ENST00000554074 TLDC1Q6P9B6 456 aa6.38□□□□□ -1.39
SLIRP-203ENST00000554074 UNC5DQ6UXZ4 953 aa6.38□□□□□ -1.39
SLIRP-203ENST00000554074 C4orf22Q6V702 233 aa6.38□□□□□ -1.39
SLIRP-203ENST00000554074 PPP1R21Q6ZMI0 780 aa6.38□□□□□ -1.39
SLIRP-203ENST00000554074 HOOK3Q86VS8 718 aa6.38□□□□□ -1.39
SLIRP-203ENST00000554074 RAB43Q86YS6 212 aa6.38□□□□□ -1.39
SLIRP-203ENST00000554074 SLC13A5Q86YT5 568 aaPredicted RBP6.38□□□□□ -1.39
SLIRP-203ENST00000554074 REXO1L1PQ8IX06 675 aa6.38□□□□□ -1.39
SLIRP-203ENST00000554074 MPP5Q8N3R9 675 aa6.38□□□□□ -1.39
SLIRP-203ENST00000554074 FAM26EQ8N5C1 309 aa6.38□□□□□ -1.39
SLIRP-203ENST00000554074 GALNT11Q8NCW6 608 aa6.38□□□□□ -1.39
SLIRP-203ENST00000554074 OR4L1Q8NH43 312 aa6.38□□□□□ -1.39
SLIRP-203ENST00000554074 DENND1AQ8TEH3 1009 aa6.38□□□□□ -1.39
SLIRP-203ENST00000554074 ASZ1Q8WWH4 475 aa6.38□□□□□ -1.39
SLIRP-203ENST00000554074 ATG4AQ8WYN0 398 aa6.38□□□□□ -1.39
SLIRP-203ENST00000554074 HDAC10Q969S8 669 aa6.38□□□□□ -1.39
SLIRP-203ENST00000554074 NACC2Q96BF6 587 aa6.38□□□□□ -1.39
SLIRP-203ENST00000554074 SLC22A18Q96BI1 424 aa6.38□□□□□ -1.39
SLIRP-203ENST00000554074 MENTQ9BUN1 341 aa6.38□□□□□ -1.39
SLIRP-203ENST00000554074 CARD6Q9BX69 1037 aa6.38□□□□□ -1.39
SLIRP-203ENST00000554074 AP1M1Q9BXS5 423 aa6.38□□□□□ -1.39
SLIRP-203ENST00000554074 SLC7A5P2Q9GIP4 190 aa6.38□□□□□ -1.39
SLIRP-203ENST00000554074 XKR8Q9H6D3 395 aa6.38□□□□□ -1.39
SLIRP-203ENST00000554074 FAM60AQ9NP50 221 aa6.38□□□□□ -1.39
SLIRP-203ENST00000554074 LZTFL1Q9NQ48 299 aa6.38□□□□□ -1.39
SLIRP-203ENST00000554074 PIH1D1Q9NWS0 290 aaKnown RBP6.38□□□□□ -1.39
SLIRP-203ENST00000554074 PAK5Q9P286 719 aa6.38□□□□□ -1.39
SLIRP-203ENST00000554074 C5AR2Q9P296 337 aa6.38□□□□□ -1.39
SLIRP-203ENST00000554074 ANKMY1Q9P2S6 941 aa6.38□□□□□ -1.39
SLIRP-203ENST00000554074 G3BP2Q9UN86 482 aaKnown RBP6.38□□□□□ -1.39
SLIRP-203ENST00000554074 ZNF148Q9UQR1 794 aa6.38□□□□□ -1.39
SLIRP-203ENST00000554074 DRG1Q9Y295 367 aaKnown RBP6.38□□□□□ -1.39
SLIRP-203ENST00000554074 ZKSCAN5Q9Y2L8 839 aa6.38□□□□□ -1.39
SLIRP-203ENST00000554074 TCAF1Q9Y4C2 921 aa6.38□□□□□ -1.39
SLIRP-203ENST00000554074 CPAMD8Q8IZJ3 1885 aa6.38□□□□□ -1.39
SLIRP-203ENST00000554074 DIDO1Q9BTC0 2240 aaKnown RBP6.38□□□□□ -1.39
SLIRP-203ENST00000554074 POLEQ07864 2286 aa6.38□□□□□ -1.39
SLIRP-203ENST00000554074 UNC79Q9P2D8 2635 aa6.37□□□□□ -1.39
SLIRP-203ENST00000554074 A0A0U1RQJ8 604 aa6.37□□□□□ -1.39
SLIRP-203ENST00000554074 CES2O00748 559 aa6.37□□□□□ -1.39
SLIRP-203ENST00000554074 PRMT5O14744 637 aaPredicted RBP6.37□□□□□ -1.39
SLIRP-203ENST00000554074 KPNA5O15131 536 aa6.37□□□□□ -1.39
SLIRP-203ENST00000554074 ZSCAN9O15535 394 aaPredicted RBP6.37□□□□□ -1.39
SLIRP-203ENST00000554074 OR1I1O60431 355 aa6.37□□□□□ -1.39
SLIRP-203ENST00000554074 DPM1O60762 260 aa6.37□□□□□ -1.39
SLIRP-203ENST00000554074 SLCO2B1O94956 709 aa6.37□□□□□ -1.39
SLIRP-203ENST00000554074 ONECUT2O95948 504 aa6.37□□□□□ -1.39
SLIRP-203ENST00000554074 S1PR4O95977 384 aa6.37□□□□□ -1.39
SLIRP-203ENST00000554074 IFNB1P01574 187 aa6.37□□□□□ -1.39
SLIRP-203ENST00000554074 APOA4P06727 396 aa6.37□□□□□ -1.39
SLIRP-203ENST00000554074 APRTP07741 180 aa6.37□□□□□ -1.39
SLIRP-203ENST00000554074 RPS3P23396 243 aaKnown RBP eCLIP6.37□□□□□ -1.395e-12■■■■■ 32.2
SLIRP-203ENST00000554074 PEBP1P30086 187 aaKnown RBP6.37□□□□□ -1.39
SLIRP-203ENST00000554074 PKLRP30613 574 aa6.37□□□□□ -1.39
SLIRP-203ENST00000554074 CCR7P32248 378 aa6.37□□□□□ -1.39
SLIRP-203ENST00000554074 GCGRP47871 477 aa6.37□□□□□ -1.39
SLIRP-203ENST00000554074 TTPAP49638 278 aa6.37□□□□□ -1.39
SLIRP-203ENST00000554074 CCL11P51671 97 aa6.37□□□□□ -1.39
SLIRP-203ENST00000554074 SOX8P57073 446 aa6.37□□□□□ -1.39
SLIRP-203ENST00000554074 PRAMEP78395 509 aa6.37□□□□□ -1.39
SLIRP-203ENST00000554074 SSPNQ14714 243 aa6.37□□□□□ -1.39
SLIRP-203ENST00000554074 RPS6KA1Q15418 735 aa6.37□□□□□ -1.39
SLIRP-203ENST00000554074 ZIC1Q15915 447 aa6.37□□□□□ -1.39
SLIRP-203ENST00000554074 KYNUQ16719 465 aa6.37□□□□□ -1.39
SLIRP-203ENST00000554074 PTCHD3Q3KNS1 767 aa6.37□□□□□ -1.39
SLIRP-203ENST00000554074 CCDC38Q502W7 563 aa6.37□□□□□ -1.39
SLIRP-203ENST00000554074 FASTKD1Q53R41 847 aaKnown RBP6.37□□□□□ -1.39
SLIRP-203ENST00000554074 PCID2Q5JVF3 399 aa6.37□□□□□ -1.39
SLIRP-203ENST00000554074 MEI1Q5TIA1 1274 aa6.37□□□□□ -1.39
SLIRP-203ENST00000554074 YOD1Q5VVQ6 348 aaPredicted RBP6.37□□□□□ -1.39
SLIRP-203ENST00000554074 MICALCLQ6ZW33 695 aa6.37□□□□□ -1.39
SLIRP-203ENST00000554074 ZNF534Q76KX8 674 aa6.37□□□□□ -1.39
SLIRP-203ENST00000554074 MRGPREQ86SM8 312 aa6.37□□□□□ -1.39
SLIRP-203ENST00000554074 LRRC6Q86X45 466 aa6.37□□□□□ -1.39
SLIRP-203ENST00000554074 DCUN1D3Q8IWE4 304 aa6.37□□□□□ -1.39
SLIRP-203ENST00000554074 DNAJC22Q8N4W6 341 aa6.37□□□□□ -1.39
SLIRP-203ENST00000554074 ZBTB2Q8N680 514 aa6.37□□□□□ -1.39
SLIRP-203ENST00000554074 CCDC89Q8N998 374 aa6.37□□□□□ -1.39
SLIRP-203ENST00000554074 PPHLN1Q8NEY8 458 aaKnown RBP6.37□□□□□ -1.39
SLIRP-203ENST00000554074 OR2Y1Q8NGV0 311 aa6.37□□□□□ -1.39
SLIRP-203ENST00000554074 OR6P1Q8NGX9 317 aa6.37□□□□□ -1.39
Retrieved 100 of 20,778 RNA–protein pairs in 23.7 ms