RNA–Protein interactions for RNA: ENST00000553868.1

SHMT2-208, Transcript of serine hydroxymethyltransferase 2, humanhuman

TSL 2

Gene SHMT2, Length 941 nt, Biotype retained intron, Subcellular localisation Cytosol .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SHMT2-208ENST00000553868 SLC22A9Q8IVM8 553 aa14.14□□□□□ -0.15
SHMT2-208ENST00000553868 SPATA6LQ8N4H0 392 aa14.14□□□□□ -0.15
SHMT2-208ENST00000553868 GIMAP7Q8NHV1 300 aa14.14□□□□□ -0.15
SHMT2-208ENST00000553868 ELMO1Q92556 727 aa14.14□□□□□ -0.15
SHMT2-208ENST00000553868 CCDC97Q96F63 343 aaPredicted RBP14.14□□□□□ -0.15
SHMT2-208ENST00000553868 CHMP6Q96FZ7 201 aa14.14□□□□□ -0.15
SHMT2-208ENST00000553868 ARHGAP9Q9BRR9 750 aa14.14□□□□□ -0.15
SHMT2-208ENST00000553868 ALG9Q9H6U8 611 aa14.14□□□□□ -0.15
SHMT2-208ENST00000553868 MANSC1Q9H8J5 431 aa14.14□□□□□ -0.15
SHMT2-208ENST00000553868 RMI1Q9H9A7 625 aa14.14□□□□□ -0.15
SHMT2-208ENST00000553868 MBNL1Q9NR56 388 aaKnown RBP14.14□□□□□ -0.15
SHMT2-208ENST00000553868 SIRPGQ9P1W8 387 aa14.14□□□□□ -0.15
SHMT2-208ENST00000553868 ATXN10Q9UBB4 475 aa14.14□□□□□ -0.15
SHMT2-208ENST00000553868 RNF112Q9ULX5 631 aa14.14□□□□□ -0.15
SHMT2-208ENST00000553868 DNMT3AQ9Y6K1 912 aaPredicted RBP14.14□□□□□ -0.15
SHMT2-208ENST00000553868 SPENQ96T58 3664 aaKnown RBP14.13□□□□□ -0.15
SHMT2-208ENST00000553868 CSMD1Q96PZ7 3565 aa14.13□□□□□ -0.15
SHMT2-208ENST00000553868 PABPN1LA6NDY0 278 aaKnown RBP14.13□□□□□ -0.15
SHMT2-208ENST00000553868 OR2AG2A6NM03 316 aa14.13□□□□□ -0.15
SHMT2-208ENST00000553868 BTN3A1O00481 513 aa14.13□□□□□ -0.15
SHMT2-208ENST00000553868 TRIM38O00635 465 aa14.13□□□□□ -0.15
SHMT2-208ENST00000553868 KLF11O14901 512 aa14.13□□□□□ -0.15
SHMT2-208ENST00000553868 LATO43561 262 aa14.13□□□□□ -0.15
SHMT2-208ENST00000553868 ZBTB14O43829 449 aa14.13□□□□□ -0.15
SHMT2-208ENST00000553868 KERAO60938 352 aa14.13□□□□□ -0.15
SHMT2-208ENST00000553868 SDC3O75056 442 aa14.13□□□□□ -0.15
SHMT2-208ENST00000553868 TPBGLP0DKB5 382 aa14.13□□□□□ -0.15
SHMT2-208ENST00000553868 ATP5F1P24539 256 aaPredicted RBP14.13□□□□□ -0.15
SHMT2-208ENST00000553868 GRK2P25098 689 aa14.13□□□□□ -0.15
SHMT2-208ENST00000553868 ALDH3A1P30838 453 aa14.13□□□□□ -0.15
SHMT2-208ENST00000553868 IGFALSP35858 605 aa14.13□□□□□ -0.15
SHMT2-208ENST00000553868 GMPRP36959 345 aa14.13□□□□□ -0.15
SHMT2-208ENST00000553868 CLN3Q13286 438 aa14.13□□□□□ -0.15
SHMT2-208ENST00000553868 PCLAFQ15004 111 aa14.13□□□□□ -0.15
SHMT2-208ENST00000553868 C3orf38Q5JPI3 329 aa14.13□□□□□ -0.15
SHMT2-208ENST00000553868 ZNF648Q5T619 568 aaPredicted RBP14.13□□□□□ -0.15
SHMT2-208ENST00000553868 CDCP2Q5VXM1 449 aa14.13□□□□□ -0.15
SHMT2-208ENST00000553868 NEK10Q6ZWH5 1172 aa14.13□□□□□ -0.15
SHMT2-208ENST00000553868 ISCA2Q86U28 154 aa14.13□□□□□ -0.15
SHMT2-208ENST00000553868 TRIM74Q86UV6 250 aa14.13□□□□□ -0.15
SHMT2-208ENST00000553868 PELI3Q8N2H9 469 aa14.13□□□□□ -0.15
SHMT2-208ENST00000553868 FAM174AQ8TBP5 190 aa14.13□□□□□ -0.15
SHMT2-208ENST00000553868 LKAAEAR1Q8TD35 194 aa14.13□□□□□ -0.15
SHMT2-208ENST00000553868 EEF1AKMT1Q8WVE0 214 aa14.13□□□□□ -0.15
SHMT2-208ENST00000553868 ZNF75CPQ92670 426 aaPredicted RBP14.13□□□□□ -0.15
SHMT2-208ENST00000553868 TMEM159Q96B96 161 aa14.13□□□□□ -0.15
SHMT2-208ENST00000553868 LINC00615Q96LM1 132 aaPredicted RBP14.13□□□□□ -0.15
SHMT2-208ENST00000553868 SLC30A3Q99726 388 aa14.13□□□□□ -0.15
SHMT2-208ENST00000553868 EPN3Q9H201 632 aa14.13□□□□□ -0.15
SHMT2-208ENST00000553868 AASDHPPTQ9NRN7 309 aa14.13□□□□□ -0.15
SHMT2-208ENST00000553868 CPSF2Q9P2I0 782 aaKnown RBP14.13□□□□□ -0.15
SHMT2-208ENST00000553868 GALPQ9UBC7 116 aa14.13□□□□□ -0.15
SHMT2-208ENST00000553868 SATB2Q9UPW6 733 aa14.13□□□□□ -0.15
SHMT2-208ENST00000553868 C17orf113A0A1B0GUU1 675 aa14.12□□□□□ -0.15
SHMT2-208ENST00000553868 A0A1W2PPC4 97 aa14.12□□□□□ -0.15
SHMT2-208ENST00000553868 TCP11X1B4DZS4 312 aa14.12□□□□□ -0.15
SHMT2-208ENST00000553868 TARM1B6A8C7 271 aa14.12□□□□□ -0.15
SHMT2-208ENST00000553868 G3V2L1 256 aa14.12□□□□□ -0.15
SHMT2-208ENST00000553868 PRAMEF26H0Y7S4 382 aa14.12□□□□□ -0.15
SHMT2-208ENST00000553868 LIN7AO14910 233 aaPredicted RBP14.12□□□□□ -0.15
SHMT2-208ENST00000553868 KMOO15229 486 aa14.12□□□□□ -0.15
SHMT2-208ENST00000553868 RAD51BO15315 384 aa14.12□□□□□ -0.15
SHMT2-208ENST00000553868 SIGLEC6O43699 453 aa14.12□□□□□ -0.15
SHMT2-208ENST00000553868 SGTAO43765 313 aa14.12□□□□□ -0.15
SHMT2-208ENST00000553868 NUAK1O60285 661 aa14.12□□□□□ -0.15
SHMT2-208ENST00000553868 TRIM13O60858 407 aa14.12□□□□□ -0.15
SHMT2-208ENST00000553868 TSPAN12O95859 305 aa14.12□□□□□ -0.15
SHMT2-208ENST00000553868 S100BP04271 92 aaPredicted RBP14.12□□□□□ -0.15
SHMT2-208ENST00000553868 SERPINE1P05121 402 aa14.12□□□□□ -0.15
SHMT2-208ENST00000553868 MPC1LP0DKB6 136 aa14.12□□□□□ -0.15
SHMT2-208ENST00000553868 ZNF8P17098 575 aaPredicted RBP14.12□□□□□ -0.15
SHMT2-208ENST00000553868 CCR7P32248 378 aa14.12□□□□□ -0.15
SHMT2-208ENST00000553868 CTSCP53634 463 aa14.12□□□□□ -0.15
SHMT2-208ENST00000553868 KIAA1024LP59773 190 aa14.12□□□□□ -0.15
SHMT2-208ENST00000553868 E2F1Q01094 437 aa14.12□□□□□ -0.15
SHMT2-208ENST00000553868 HSPA14Q0VDF9 509 aa14.12□□□□□ -0.15
SHMT2-208ENST00000553868 SRSF6Q13247 344 aaKnown RBP14.12□□□□□ -0.15
SHMT2-208ENST00000553868 BOP1Q14137 746 aaKnown RBP14.12□□□□□ -0.15
SHMT2-208ENST00000553868 CHI3L2Q15782 390 aa14.12□□□□□ -0.15
SHMT2-208ENST00000553868 ACSBG2Q5FVE4 666 aa14.12□□□□□ -0.15
SHMT2-208ENST00000553868 LIPMQ5VYY2 423 aa14.12□□□□□ -0.15
SHMT2-208ENST00000553868 LRRTM4Q86VH4 590 aa14.12□□□□□ -0.15
SHMT2-208ENST00000553868 GLMNQ92990 594 aa14.12□□□□□ -0.15
SHMT2-208ENST00000553868 APOOQ9BUR5 198 aa14.12□□□□□ -0.15
SHMT2-208ENST00000553868 HS3ST3A1Q9Y663 406 aa14.12□□□□□ -0.15
SHMT2-208ENST00000553868 KIF26BQ2KJY2 2108 aa14.12□□□□□ -0.15
SHMT2-208ENST00000553868 A0A1W2PR77 199 aa14.11□□□□□ -0.15
SHMT2-208ENST00000553868 CHUKO15111 745 aa14.11□□□□□ -0.15
SHMT2-208ENST00000553868 SNUPNO95149 360 aaKnown RBP14.11□□□□□ -0.15
SHMT2-208ENST00000553868 C8GP07360 202 aa14.11□□□□□ -0.15
SHMT2-208ENST00000553868 VCLP18206 1134 aa14.11□□□□□ -0.15
SHMT2-208ENST00000553868 BGNP21810 368 aa14.11□□□□□ -0.15
SHMT2-208ENST00000553868 HTR1BP28222 390 aa14.11□□□□□ -0.15
SHMT2-208ENST00000553868 ARRB1P49407 418 aaPredicted RBP14.11□□□□□ -0.15
SHMT2-208ENST00000553868 DNAJB13P59910 316 aa14.11□□□□□ -0.15
SHMT2-208ENST00000553868 NAA20P61599 178 aa14.11□□□□□ -0.15
SHMT2-208ENST00000553868 YPEL5P62699 121 aa14.11□□□□□ -0.15
SHMT2-208ENST00000553868 STX3Q13277 289 aa14.11□□□□□ -0.15
SHMT2-208ENST00000553868 SP140Q13342 867 aa14.11□□□□□ -0.15
SHMT2-208ENST00000553868 GBX1Q14549 363 aa14.11□□□□□ -0.15
Retrieved 100 of 20,778 RNA–protein pairs in 34.3 ms