RNA–Protein interactions for RNA: ENST00000553704.2

LINC-ROR-201, Transcript of long intergenic non-protein coding RNA, regulator of reprogramming, humanhuman

TSL 1 (best) BASIC

Gene LINC-ROR, Length 2,603 nt, Biotype lincRNA, Subcellular localisation Cytoplasm .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LINC-ROR-201ENST00000553704 ISL1P61371 349 aa6.77□□□□□ -1.33
LINC-ROR-201ENST00000553704 RAPSNQ13702 412 aa6.77□□□□□ -1.33
LINC-ROR-201ENST00000553704 SKIV2LQ15477 1246 aaKnown RBP6.77□□□□□ -1.33
LINC-ROR-201ENST00000553704 CHRNA6Q15825 494 aa6.77□□□□□ -1.33
LINC-ROR-201ENST00000553704 CPSF6Q16630 551 aaKnown RBP eCLIP6.77□□□□□ -1.33
LINC-ROR-201ENST00000553704 CDKN3Q16667 212 aa6.77□□□□□ -1.33
LINC-ROR-201ENST00000553704 GPRC6AQ5T6X5 926 aa6.77□□□□□ -1.33
LINC-ROR-201ENST00000553704 ARMC12Q5T9G4 340 aa6.77□□□□□ -1.33
LINC-ROR-201ENST00000553704 CES5AQ6NT32 575 aa6.77□□□□□ -1.33
LINC-ROR-201ENST00000553704 RFLNAQ6ZTI6 216 aa6.77□□□□□ -1.33
LINC-ROR-201ENST00000553704 CEP68Q76N32 757 aa6.77□□□□□ -1.33
LINC-ROR-201ENST00000553704 DET1Q7L5Y6 550 aa6.77□□□□□ -1.33
LINC-ROR-201ENST00000553704 SAPCD2Q86UD0 394 aa6.77□□□□□ -1.33
LINC-ROR-201ENST00000553704 CALHM3Q86XJ0 350 aa6.77□□□□□ -1.33
LINC-ROR-201ENST00000553704 APCDD1Q8J025 514 aa6.77□□□□□ -1.33
LINC-ROR-201ENST00000553704 UBTD2Q8WUN7 234 aa6.77□□□□□ -1.33
LINC-ROR-201ENST00000553704 USP7Q93009 1102 aa6.77□□□□□ -1.33
LINC-ROR-201ENST00000553704 SDCCAG3Q96C92 435 aa6.77□□□□□ -1.33
LINC-ROR-201ENST00000553704 TSSK3Q96PN8 268 aa6.77□□□□□ -1.33
LINC-ROR-201ENST00000553704 OR52E6Q96RD3 313 aa6.77□□□□□ -1.33
LINC-ROR-201ENST00000553704 MYOCQ99972 504 aa6.77□□□□□ -1.33
LINC-ROR-201ENST00000553704 BEGAINQ9BUH8 593 aa6.77□□□□□ -1.33
LINC-ROR-201ENST00000553704 KLF16Q9BXK1 252 aaPredicted RBP6.77□□□□□ -1.33
LINC-ROR-201ENST00000553704 DCAF13Q9NV06 445 aaKnown RBP6.77□□□□□ -1.33
LINC-ROR-201ENST00000553704 GPRC5BQ9NZH0 403 aa6.77□□□□□ -1.33
LINC-ROR-201ENST00000553704 GNPTGQ9UJJ9 305 aa6.77□□□□□ -1.33
LINC-ROR-201ENST00000553704 ABCG2Q9UNQ0 655 aa6.77□□□□□ -1.33
LINC-ROR-201ENST00000553704 FAM220BPB1ANY3 271 aa6.77□□□□□ -1.33
LINC-ROR-201ENST00000553704 IFRD1O00458 451 aaPredicted RBP6.77□□□□□ -1.33
LINC-ROR-201ENST00000553704 GNGT2O14610 69 aa6.77□□□□□ -1.33
LINC-ROR-201ENST00000553704 BCAS1O75363 584 aaPredicted RBP6.77□□□□□ -1.33
LINC-ROR-201ENST00000553704 ULK1O75385 1050 aa6.77□□□□□ -1.33
LINC-ROR-201ENST00000553704 GMNNO75496 209 aa6.77□□□□□ -1.33
LINC-ROR-201ENST00000553704 CLPXO76031 633 aa6.77□□□□□ -1.33
LINC-ROR-201ENST00000553704 DIRAS1O95057 198 aa6.77□□□□□ -1.33
LINC-ROR-201ENST00000553704 ALDH2P05091 517 aa6.77□□□□□ -1.33
LINC-ROR-201ENST00000553704 ZNF7P17097 686 aaPredicted RBP6.77□□□□□ -1.33
LINC-ROR-201ENST00000553704 ALDH4A1P30038 563 aa6.77□□□□□ -1.33
LINC-ROR-201ENST00000553704 HNF1BP35680 557 aa6.77□□□□□ -1.33
LINC-ROR-201ENST00000553704 GNPDA1P46926 289 aa6.77□□□□□ -1.33
LINC-ROR-201ENST00000553704 NR1D2Q14995 579 aa6.77□□□□□ -1.33
LINC-ROR-201ENST00000553704 MOGQ16653 247 aa6.77□□□□□ -1.33
LINC-ROR-201ENST00000553704 CARD16Q5EG05 197 aa6.77□□□□□ -1.33
LINC-ROR-201ENST00000553704 ZNF691Q5VV52 312 aa6.77□□□□□ -1.33
LINC-ROR-201ENST00000553704 TTC23Q5W5X9 447 aa6.77□□□□□ -1.33
LINC-ROR-201ENST00000553704 C16orf87Q6PH81 154 aa6.77□□□□□ -1.33
LINC-ROR-201ENST00000553704 ANKS3Q6ZW76 656 aa6.77□□□□□ -1.33
LINC-ROR-201ENST00000553704 LRRC8DQ7L1W4 858 aa6.77□□□□□ -1.33
LINC-ROR-201ENST00000553704 TRIM46Q7Z4K8 759 aa6.77□□□□□ -1.33
LINC-ROR-201ENST00000553704 IGFN1Q86VF2 1251 aa6.77□□□□□ -1.33
LINC-ROR-201ENST00000553704 SNX29P2Q8IUI4 249 aa6.77□□□□□ -1.33
LINC-ROR-201ENST00000553704 RBFAQ8N0V3 343 aa6.77□□□□□ -1.33
LINC-ROR-201ENST00000553704 PARP8Q8N3A8 854 aa6.77□□□□□ -1.33
LINC-ROR-201ENST00000553704 ZCCHC7Q8N3Z6 543 aaKnown RBP6.77□□□□□ -1.33
LINC-ROR-201ENST00000553704 PCSK9Q8NBP7 692 aaKnown RBP6.77□□□□□ -1.33
LINC-ROR-201ENST00000553704 ZNF555Q8NEP9 628 aa6.77□□□□□ -1.33
LINC-ROR-201ENST00000553704 ADAMTS19Q8TE59 1207 aa6.77□□□□□ -1.33
LINC-ROR-201ENST00000553704 RAB2BQ8WUD1 216 aa6.77□□□□□ -1.33
LINC-ROR-201ENST00000553704 VOPP1Q96AW1 172 aa6.77□□□□□ -1.33
LINC-ROR-201ENST00000553704 ALG14Q96F25 216 aa6.77□□□□□ -1.33
LINC-ROR-201ENST00000553704 EGLN2Q96KS0 407 aa6.77□□□□□ -1.33
LINC-ROR-201ENST00000553704 RBM4BQ9BQ04 359 aaKnown RBP6.77□□□□□ -1.33
LINC-ROR-201ENST00000553704 RBM4Q9BWF3 364 aaKnown RBP6.77□□□□□ -1.33
LINC-ROR-201ENST00000553704 GPN2Q9H9Y4 310 aaPredicted RBP6.77□□□□□ -1.33
LINC-ROR-201ENST00000553704 MAGEE1Q9HCI5 957 aa6.77□□□□□ -1.33
LINC-ROR-201ENST00000553704 LATS2Q9NRM7 1088 aa6.77□□□□□ -1.33
LINC-ROR-201ENST00000553704 RNF186Q9NXI6 227 aa6.77□□□□□ -1.33
LINC-ROR-201ENST00000553704 WARS2Q9UGM6 360 aaKnown RBP6.77□□□□□ -1.33
LINC-ROR-201ENST00000553704 TRPS1Q9UHF7 1281 aa6.77□□□□□ -1.33
LINC-ROR-201ENST00000553704 PSME2Q9UL46 239 aa6.77□□□□□ -1.33
LINC-ROR-201ENST00000553704 CLEC4EQ9ULY5 219 aa6.77□□□□□ -1.33
LINC-ROR-201ENST00000553704 TRBV5-4A0A0C4DH59 114 aa6.76□□□□□ -1.33
LINC-ROR-201ENST00000553704 LOC100130705A0A1B0GUX0 176 aa6.76□□□□□ -1.33
LINC-ROR-201ENST00000553704 TBKBP1A7MCY6 615 aa6.76□□□□□ -1.33
LINC-ROR-201ENST00000553704 UPK3BL1B0FP48 263 aa6.76□□□□□ -1.33
LINC-ROR-201ENST00000553704 UPK3BL2E5RIL1 263 aa6.76□□□□□ -1.33
LINC-ROR-201ENST00000553704 PTGES3LE9PB15 166 aa6.76□□□□□ -1.33
LINC-ROR-201ENST00000553704 SLC28A1O00337 649 aa6.76□□□□□ -1.33
LINC-ROR-201ENST00000553704 TOR1BO14657 336 aa6.76□□□□□ -1.33
LINC-ROR-201ENST00000553704 GREM1O60565 184 aa6.76□□□□□ -1.33
LINC-ROR-201ENST00000553704 PRAMEF4O60810 478 aa6.76□□□□□ -1.33
LINC-ROR-201ENST00000553704 E2F6O75461 281 aa6.76□□□□□ -1.33
LINC-ROR-201ENST00000553704 SCELO95171 688 aa6.76□□□□□ -1.33
LINC-ROR-201ENST00000553704 TRBC1P01850 177 aa6.76□□□□□ -1.33
LINC-ROR-201ENST00000553704 MSH3P20585 1137 aa6.76□□□□□ -1.33
LINC-ROR-201ENST00000553704 FMO3P31513 532 aa6.76□□□□□ -1.33
LINC-ROR-201ENST00000553704 MAP2K4P45985 399 aa6.76□□□□□ -1.33
LINC-ROR-201ENST00000553704 RGS4P49798 205 aa6.76□□□□□ -1.33
LINC-ROR-201ENST00000553704 GABARAPL2P60520 117 aa6.76□□□□□ -1.33
LINC-ROR-201ENST00000553704 RPS14P62263 151 aaKnown RBP6.76□□□□□ -1.33
LINC-ROR-201ENST00000553704 VAC14Q08AM6 782 aa6.76□□□□□ -1.33
LINC-ROR-201ENST00000553704 MTA1Q13330 715 aa6.76□□□□□ -1.33
LINC-ROR-201ENST00000553704 ARHGEF7Q14155 803 aa6.76□□□□□ -1.33
LINC-ROR-201ENST00000553704 SPIDRQ14159 915 aa6.76□□□□□ -1.33
LINC-ROR-201ENST00000553704 CTF1Q16619 201 aa6.76□□□□□ -1.33
LINC-ROR-201ENST00000553704 CACHD1Q5VU97 1274 aa6.76□□□□□ -1.33
LINC-ROR-201ENST00000553704 PRAMEF9Q5VWM5 478 aa6.76□□□□□ -1.33
LINC-ROR-201ENST00000553704 CERS6Q6ZMG9 384 aa6.76□□□□□ -1.33
LINC-ROR-201ENST00000553704 SNX20Q7Z614 316 aa6.76□□□□□ -1.33
LINC-ROR-201ENST00000553704 TMEM150AQ86TG1 271 aa6.76□□□□□ -1.33
Retrieved 100 of 20,778 RNA–protein pairs in 33.6 ms