RNA–Protein interactions for RNA: ENST00000553406.1

DDHD1-204, Transcript of DDHD domain containing 1, human

TSL 3

Gene DDHD1, Length 558 nt, Biotype retained intron, Subcellular localisation Ribosome .

RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
DDHD1-204	ENST00000553406	EPOP	A6NHQ4	379 aa		4.24	□□□□□ -1.73
DDHD1-204	ENST00000553406	EBAG9	O00559	213 aa		4.24	□□□□□ -1.73
DDHD1-204	ENST00000553406	GRID2	O43424	1007 aa		4.24	□□□□□ -1.73
DDHD1-204	ENST00000553406	MTRF1	O75570	445 aa	Known RBP	4.24	□□□□□ -1.73
DDHD1-204	ENST00000553406	PLG	P00747	810 aa	Predicted RBP	4.24	□□□□□ -1.73
DDHD1-204	ENST00000553406	IGHV4-30-4	P0DP06	118 aa		4.24	□□□□□ -1.73
DDHD1-204	ENST00000553406	TROVE2	P10155	538 aa	Known RBP eCLIP	4.24	□□□□□ -1.73
DDHD1-204	ENST00000553406	FOSL2	P15408	326 aa		4.24	□□□□□ -1.73
DDHD1-204	ENST00000553406	H2AFX	P16104	143 aa	Predicted RBP	4.24	□□□□□ -1.73
DDHD1-204	ENST00000553406	FER	P16591	822 aa		4.24	□□□□□ -1.73
DDHD1-204	ENST00000553406	AXL	P30530	894 aa		4.24	□□□□□ -1.73
DDHD1-204	ENST00000553406	STIP1	P31948	543 aa	Known RBP	4.24	□□□□□ -1.73
DDHD1-204	ENST00000553406	TTK	P33981	857 aa		4.24	□□□□□ -1.73
DDHD1-204	ENST00000553406	EFNA5	P52803	228 aa		4.24	□□□□□ -1.73
DDHD1-204	ENST00000553406	POU5F1	Q01860	360 aa	Known RBP	4.24	□□□□□ -1.73
DDHD1-204	ENST00000553406	DLG1	Q12959	904 aa		4.24	□□□□□ -1.73
DDHD1-204	ENST00000553406	PTPN14	Q15678	1187 aa		4.24	□□□□□ -1.73
DDHD1-204	ENST00000553406	EPC2	Q52LR7	807 aa		4.24	□□□□□ -1.73
DDHD1-204	ENST00000553406	CLLU1OS	Q5K130	101 aa		4.24	□□□□□ -1.73
DDHD1-204	ENST00000553406	MFSD4B	Q5TF39	518 aa		4.24	□□□□□ -1.73
DDHD1-204	ENST00000553406	RETSAT	Q6NUM9	610 aa		4.24	□□□□□ -1.73
DDHD1-204	ENST00000553406	C1orf186	Q6ZWK4	172 aa		4.24	□□□□□ -1.73
DDHD1-204	ENST00000553406	TMCO2	Q7Z6W1	182 aa	Predicted RBP	4.24	□□□□□ -1.73
DDHD1-204	ENST00000553406	EXOC3L1	Q86VI1	746 aa		4.24	□□□□□ -1.73
DDHD1-204	ENST00000553406	ECHDC2	Q86YB7	292 aa		4.24	□□□□□ -1.73
DDHD1-204	ENST00000553406	SFTPA2	Q8IWL1	248 aa		4.24	□□□□□ -1.73
DDHD1-204	ENST00000553406	PEX5L	Q8IYB4	626 aa		4.24	□□□□□ -1.73
DDHD1-204	ENST00000553406	MUC20	Q8N307	709 aa	Predicted RBP	4.24	□□□□□ -1.73
DDHD1-204	ENST00000553406	SYT2	Q8N9I0	419 aa	Predicted RBP	4.24	□□□□□ -1.73
DDHD1-204	ENST00000553406	RNF149	Q8NC42	400 aa		4.24	□□□□□ -1.73
DDHD1-204	ENST00000553406	LINC00301	Q8NCQ3	95 aa		4.24	□□□□□ -1.73
DDHD1-204	ENST00000553406	VPS37A	Q8NEZ2	397 aa		4.24	□□□□□ -1.73
DDHD1-204	ENST00000553406	NEK11	Q8NG66	645 aa		4.24	□□□□□ -1.73
DDHD1-204	ENST00000553406	RASSF8	Q8NHQ8	419 aa		4.24	□□□□□ -1.73
DDHD1-204	ENST00000553406	KCNG4	Q8TDN1	519 aa		4.24	□□□□□ -1.73
DDHD1-204	ENST00000553406	LRRC15	Q8TF66	581 aa		4.24	□□□□□ -1.73
DDHD1-204	ENST00000553406	ZFAND2B	Q8WV99	257 aa		4.24	□□□□□ -1.73
DDHD1-204	ENST00000553406	DYDC1	Q8WWB3	177 aa		4.24	□□□□□ -1.73
DDHD1-204	ENST00000553406	CCDC47	Q96A33	483 aa	Known RBP	4.24	□□□□□ -1.73
DDHD1-204	ENST00000553406	TMEM143	Q96AN5	459 aa		4.24	□□□□□ -1.73
DDHD1-204	ENST00000553406	OTULIN	Q96BN8	352 aa		4.24	□□□□□ -1.73
DDHD1-204	ENST00000553406	FAM81B	Q96LP2	452 aa		4.24	□□□□□ -1.73
DDHD1-204	ENST00000553406	LRFN5	Q96NI6	719 aa		4.24	□□□□□ -1.73
DDHD1-204	ENST00000553406	IL17F	Q96PD4	163 aa		4.24	□□□□□ -1.73
DDHD1-204	ENST00000553406	ZNF385A	Q96PM9	386 aa	Known RBP	4.24	□□□□□ -1.73
DDHD1-204	ENST00000553406	USP28	Q96RU2	1077 aa		4.24	□□□□□ -1.73
DDHD1-204	ENST00000553406	SH3GL1	Q99961	368 aa		4.24	□□□□□ -1.73
DDHD1-204	ENST00000553406	MRPL9	Q9BYD2	267 aa	Known RBP	4.24	□□□□□ -1.73
DDHD1-204	ENST00000553406	TRIM4	Q9C037	500 aa		4.24	□□□□□ -1.73
DDHD1-204	ENST00000553406	TMEM117	Q9H0C3	514 aa		4.24	□□□□□ -1.73
DDHD1-204	ENST00000553406	LMAN2L	Q9H0V9	348 aa		4.24	□□□□□ -1.73
DDHD1-204	ENST00000553406	RSPH9	Q9H1X1	276 aa	Predicted RBP	4.24	□□□□□ -1.73
DDHD1-204	ENST00000553406	FZD8	Q9H461	694 aa		4.24	□□□□□ -1.73
DDHD1-204	ENST00000553406	TLR8	Q9NR97	1041 aa	Known RBP	4.24	□□□□□ -1.73
DDHD1-204	ENST00000553406	BLOC1S4	Q9NUP1	217 aa		4.24	□□□□□ -1.73
DDHD1-204	ENST00000553406	BARX2	Q9UMQ3	279 aa	Predicted RBP	4.24	□□□□□ -1.73
DDHD1-204	ENST00000553406	PIN4	Q9Y237	131 aa	Known RBP	4.24	□□□□□ -1.73
DDHD1-204	ENST00000553406	CLIC4	Q9Y696	253 aa		4.24	□□□□□ -1.73
DDHD1-204	ENST00000553406	VPS13A	Q96RL7	3174 aa		4.23	□□□□□ -1.73
DDHD1-204	ENST00000553406	SAA2-SAA4	A0A096LPE2	208 aa		4.23	□□□□□ -1.73
DDHD1-204	ENST00000553406	FRMD3	A2A2Y4	597 aa		4.23	□□□□□ -1.73
DDHD1-204	ENST00000553406		F8VZ95	297 aa		4.23	□□□□□ -1.73
DDHD1-204	ENST00000553406	BMPR1B	O00238	502 aa		4.23	□□□□□ -1.73
DDHD1-204	ENST00000553406	WNT9B	O14905	357 aa		4.23	□□□□□ -1.73
DDHD1-204	ENST00000553406	TIMM44	O43615	452 aa		4.23	□□□□□ -1.73
DDHD1-204	ENST00000553406	PIGR	P01833	764 aa		4.23	□□□□□ -1.73
DDHD1-204	ENST00000553406	EDN1	P05305	212 aa		4.23	□□□□□ -1.73
DDHD1-204	ENST00000553406	RB1	P06400	928 aa		4.23	□□□□□ -1.73
DDHD1-204	ENST00000553406	CHRM4	P08173	479 aa		4.23	□□□□□ -1.73
DDHD1-204	ENST00000553406	IDO1	P14902	403 aa		4.23	□□□□□ -1.73
DDHD1-204	ENST00000553406	ARF4	P18085	180 aa	Predicted RBP	4.23	□□□□□ -1.73
DDHD1-204	ENST00000553406	UBA7	P41226	1012 aa		4.23	□□□□□ -1.73
DDHD1-204	ENST00000553406	UBE3A	Q05086	875 aa		4.23	□□□□□ -1.73
DDHD1-204	ENST00000553406	ZBTB17	Q13105	803 aa		4.23	□□□□□ -1.73
DDHD1-204	ENST00000553406	DMP1	Q13316	513 aa	Predicted RBP	4.23	□□□□□ -1.73
DDHD1-204	ENST00000553406	CUL3	Q13618	768 aa		4.23	□□□□□ -1.73
DDHD1-204	ENST00000553406	TUBB2A	Q13885	445 aa		4.23	□□□□□ -1.73
DDHD1-204	ENST00000553406	TRIM14	Q14142	442 aa		4.23	□□□□□ -1.73
DDHD1-204	ENST00000553406	INA	Q16352	499 aa		4.23	□□□□□ -1.73
DDHD1-204	ENST00000553406	SLC18A3	Q16572	532 aa		4.23	□□□□□ -1.73
DDHD1-204	ENST00000553406	MAPK6	Q16659	721 aa		4.23	□□□□□ -1.73
DDHD1-204	ENST00000553406	TPD52L1	Q16890	204 aa	Predicted RBP	4.23	□□□□□ -1.73
DDHD1-204	ENST00000553406	KRTAP27-1	Q3LI81	207 aa		4.23	□□□□□ -1.73
DDHD1-204	ENST00000553406	KRTAP24-1	Q3LI83	254 aa		4.23	□□□□□ -1.73
DDHD1-204	ENST00000553406	DCAF4L1	Q3SXM0	396 aa		4.23	□□□□□ -1.73
DDHD1-204	ENST00000553406	FAM69B	Q5VUD6	431 aa		4.23	□□□□□ -1.73
DDHD1-204	ENST00000553406	NOTUM	Q6P988	496 aa		4.23	□□□□□ -1.73
DDHD1-204	ENST00000553406	SLC27A1	Q6PCB7	646 aa		4.23	□□□□□ -1.73
DDHD1-204	ENST00000553406	CATSPER4	Q7RTX7	472 aa		4.23	□□□□□ -1.73
DDHD1-204	ENST00000553406	TRMT1L	Q7Z2T5	733 aa	Known RBP	4.23	□□□□□ -1.73
DDHD1-204	ENST00000553406	MON1A	Q86VX9	555 aa		4.23	□□□□□ -1.73
DDHD1-204	ENST00000553406	CCDC105	Q8IYK2	499 aa		4.23	□□□□□ -1.73
DDHD1-204	ENST00000553406	NAGS	Q8N159	534 aa		4.23	□□□□□ -1.73
DDHD1-204	ENST00000553406	MAB21L3	Q8N8X9	362 aa		4.23	□□□□□ -1.73
DDHD1-204	ENST00000553406	CNNM3	Q8NE01	707 aa		4.23	□□□□□ -1.73
DDHD1-204	ENST00000553406	DNAAF1	Q8NEP3	725 aa		4.23	□□□□□ -1.73
DDHD1-204	ENST00000553406	SPPL3	Q8TCT6	385 aa		4.23	□□□□□ -1.73
DDHD1-204	ENST00000553406	GDPD5	Q8WTR4	605 aa		4.23	□□□□□ -1.73
DDHD1-204	ENST00000553406	TEKT4	Q8WW24	435 aa		4.23	□□□□□ -1.73
DDHD1-204	ENST00000553406	HSPH1	Q92598	858 aa		4.23	□□□□□ -1.73

Retrieved 100 of 20,778 RNA–protein pairs in 35.6 ms