RNA–Protein interactions for RNA: ENST00000553370.5

ACTN1-208, Transcript of actinin alpha 1, humanhuman

TSL 3

Gene ACTN1, Length 605 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ACTN1-208ENST00000553370 PCMTD2Q9NV79 361 aa9.6□□□□□ -0.87
ACTN1-208ENST00000553370 ZDHHC3Q9NYG2 299 aa9.6□□□□□ -0.87
ACTN1-208ENST00000553370 ACTR10Q9NZ32 417 aa9.6□□□□□ -0.87
ACTN1-208ENST00000553370 SMARCAL1Q9NZC9 954 aa9.6□□□□□ -0.87
ACTN1-208ENST00000553370 IFT80Q9P2H3 777 aaPredicted RBP9.6□□□□□ -0.87
ACTN1-208ENST00000553370 FEZ2Q9UHY8 353 aaPredicted RBP9.6□□□□□ -0.87
ACTN1-208ENST00000553370 ASF1AQ9Y294 204 aa9.6□□□□□ -0.87
ACTN1-208ENST00000553370 PTRH2Q9Y3E5 179 aaKnown RBP9.6□□□□□ -0.87
ACTN1-208ENST00000553370 AP1M2Q9Y6Q5 423 aa9.6□□□□□ -0.87
ACTN1-208ENST00000553370 LRBAP50851 2863 aa9.6□□□□□ -0.87
ACTN1-208ENST00000553370 POLEQ07864 2286 aa9.59□□□□□ -0.87
ACTN1-208ENST00000553370 PCNX1Q96RV3 2341 aa9.59□□□□□ -0.87
ACTN1-208ENST00000553370 C17orf113A0A1B0GUU1 675 aa9.59□□□□□ -0.87
ACTN1-208ENST00000553370 F8W8V4 182 aa9.59□□□□□ -0.87
ACTN1-208ENST00000553370 BTN3A3O00478 584 aa9.59□□□□□ -0.87
ACTN1-208ENST00000553370 PJA2O43164 708 aa9.59□□□□□ -0.87
ACTN1-208ENST00000553370 SORBS2O94875 1100 aaKnown RBP9.59□□□□□ -0.87
ACTN1-208ENST00000553370 TJP3O95049 919 aa9.59□□□□□ -0.87
ACTN1-208ENST00000553370 DDAH2O95865 285 aa9.59□□□□□ -0.87
ACTN1-208ENST00000553370 FTH1P02794 183 aa9.59□□□□□ -0.87
ACTN1-208ENST00000553370 UQCRHP07919 91 aa9.59□□□□□ -0.87
ACTN1-208ENST00000553370 CD63P08962 238 aa9.59□□□□□ -0.87
ACTN1-208ENST00000553370 ACRV1P26436 265 aa9.59□□□□□ -0.87
ACTN1-208ENST00000553370 EIF1AXP47813 144 aaKnown RBP9.59□□□□□ -0.87
ACTN1-208ENST00000553370 CD151P48509 253 aa9.59□□□□□ -0.87
ACTN1-208ENST00000553370 ZNF140P52738 457 aaPredicted RBP9.59□□□□□ -0.87
ACTN1-208ENST00000553370 RPA4Q13156 261 aa9.59□□□□□ -0.87
ACTN1-208ENST00000553370 MRPL49Q13405 166 aaKnown RBP9.59□□□□□ -0.87
ACTN1-208ENST00000553370 SPARCL1Q14515 664 aa9.59□□□□□ -0.87
ACTN1-208ENST00000553370 EIF2S3LQ2VIR3 472 aaKnown RBP9.59□□□□□ -0.87
ACTN1-208ENST00000553370 COX20Q5RI15 118 aa9.59□□□□□ -0.87
ACTN1-208ENST00000553370 LCN10Q6JVE6 187 aa9.59□□□□□ -0.87
ACTN1-208ENST00000553370 SERPINA9Q86WD7 417 aa9.59□□□□□ -0.87
ACTN1-208ENST00000553370 TMTC1Q8IUR5 882 aa9.59□□□□□ -0.87
ACTN1-208ENST00000553370 TFGQ92734 400 aaPredicted RBP9.59□□□□□ -0.87
ACTN1-208ENST00000553370 KRT35Q92764 455 aa9.59□□□□□ -0.87
ACTN1-208ENST00000553370 TCTN2Q96GX1 697 aa9.59□□□□□ -0.87
ACTN1-208ENST00000553370 DNAJC1Q96KC8 554 aaKnown RBP9.59□□□□□ -0.87
ACTN1-208ENST00000553370 SPATA13Q96N96 652 aa9.59□□□□□ -0.87
ACTN1-208ENST00000553370 TRAPPC9Q96Q05 1148 aa9.59□□□□□ -0.87
ACTN1-208ENST00000553370 TTC1Q99614 292 aa9.59□□□□□ -0.87
ACTN1-208ENST00000553370 NDC1Q9BTX1 674 aa9.59□□□□□ -0.87
ACTN1-208ENST00000553370 NUDT9Q9BW91 350 aa9.59□□□□□ -0.87
ACTN1-208ENST00000553370 OSBPL8Q9BZF1 889 aa9.59□□□□□ -0.87
ACTN1-208ENST00000553370 CUEDC1Q9NWM3 386 aaPredicted RBP9.59□□□□□ -0.87
ACTN1-208ENST00000553370 SRPK3Q9UPE1 567 aa9.59□□□□□ -0.87
ACTN1-208ENST00000553370 ABCA12Q86UK0 2595 aa9.58□□□□□ -0.88
ACTN1-208ENST00000553370 A0A0J9YY10 115 aa9.58□□□□□ -0.88
ACTN1-208ENST00000553370 ISM1B1AKI9 464 aa9.58□□□□□ -0.88
ACTN1-208ENST00000553370 QSOX1O00391 747 aa9.58□□□□□ -0.88
ACTN1-208ENST00000553370 LIN7AO14910 233 aaPredicted RBP9.58□□□□□ -0.88
ACTN1-208ENST00000553370 ZSCAN9O15535 394 aaPredicted RBP9.58□□□□□ -0.88
ACTN1-208ENST00000553370 SIAH2O43255 324 aa9.58□□□□□ -0.88
ACTN1-208ENST00000553370 SEMA7AO75326 666 aa9.58□□□□□ -0.88
ACTN1-208ENST00000553370 IPO13O94829 963 aaKnown RBP9.58□□□□□ -0.88
ACTN1-208ENST00000553370 AP2A2O94973 939 aa9.58□□□□□ -0.88
ACTN1-208ENST00000553370 GSTM1P09488 218 aa9.58□□□□□ -0.88
ACTN1-208ENST00000553370 UGT2B7P16662 529 aa9.58□□□□□ -0.88
ACTN1-208ENST00000553370 ITGA3P26006 1051 aa9.58□□□□□ -0.88
ACTN1-208ENST00000553370 RORAP35398 523 aa9.58□□□□□ -0.88
ACTN1-208ENST00000553370 CSE1LP55060 971 aaKnown RBP9.58□□□□□ -0.88
ACTN1-208ENST00000553370 HADHBP55084 474 aaKnown RBP9.58□□□□□ -0.88
ACTN1-208ENST00000553370 GSTM4Q03013 218 aa9.58□□□□□ -0.88
ACTN1-208ENST00000553370 CACNG1Q06432 222 aa9.58□□□□□ -0.88
ACTN1-208ENST00000553370 POU6F1Q14863 301 aa9.58□□□□□ -0.88
ACTN1-208ENST00000553370 TCEAL1Q15170 157 aa9.58□□□□□ -0.88
ACTN1-208ENST00000553370 P3H1Q32P28 736 aa9.58□□□□□ -0.88
ACTN1-208ENST00000553370 PAPD7Q5XG87 772 aaKnown RBP9.58□□□□□ -0.88
ACTN1-208ENST00000553370 CDHR3Q6ZTQ4 885 aa9.58□□□□□ -0.88
ACTN1-208ENST00000553370 LURAP1LQ8IV03 231 aa9.58□□□□□ -0.88
ACTN1-208ENST00000553370 ZADH2Q8N4Q0 377 aa9.58□□□□□ -0.88
ACTN1-208ENST00000553370 ZBTB2Q8N680 514 aa9.58□□□□□ -0.88
ACTN1-208ENST00000553370 ZNF655Q8N720 491 aaPredicted RBP9.58□□□□□ -0.88
ACTN1-208ENST00000553370 OR5AR1Q8NGP9 310 aa9.58□□□□□ -0.88
ACTN1-208ENST00000553370 GSDMBQ8TAX9 411 aa9.58□□□□□ -0.88
ACTN1-208ENST00000553370 ADAMTS17Q8TE56 1095 aa9.58□□□□□ -0.88
ACTN1-208ENST00000553370 C5orf34Q96MH7 638 aa9.58□□□□□ -0.88
ACTN1-208ENST00000553370 TSSK1BQ9BXA7 367 aa9.58□□□□□ -0.88
ACTN1-208ENST00000553370 AP1M1Q9BXS5 423 aa9.58□□□□□ -0.88
ACTN1-208ENST00000553370 PITPNM3Q9BZ71 974 aa9.58□□□□□ -0.88
ACTN1-208ENST00000553370 TRIM5Q9C035 493 aa9.58□□□□□ -0.88
ACTN1-208ENST00000553370 OR52A5Q9H2C5 316 aa9.58□□□□□ -0.88
ACTN1-208ENST00000553370 TFB2MQ9H5Q4 396 aaKnown RBP9.58□□□□□ -0.88
ACTN1-208ENST00000553370 LRRC40Q9H9A6 602 aa9.58□□□□□ -0.88
ACTN1-208ENST00000553370 MLXIPLQ9NP71 852 aa9.58□□□□□ -0.88
ACTN1-208ENST00000553370 POLG2Q9UHN1 485 aa9.58□□□□□ -0.88
ACTN1-208ENST00000553370 B3GNT3Q9Y2A9 372 aa9.58□□□□□ -0.88
ACTN1-208ENST00000553370 PCDHA13Q9Y5I0 950 aa9.58□□□□□ -0.88
ACTN1-208ENST00000553370 TCP11X1B4DZS4 312 aa9.57□□□□□ -0.88
ACTN1-208ENST00000553370 KRT86O43790 486 aa9.57□□□□□ -0.88
ACTN1-208ENST00000553370 CEACAM4O75871 244 aa9.57□□□□□ -0.88
ACTN1-208ENST00000553370 RPN2P04844 631 aa9.57□□□□□ -0.88
ACTN1-208ENST00000553370 CHRM5P08912 532 aaPredicted RBP9.57□□□□□ -0.88
ACTN1-208ENST00000553370 OR56A5P0C7T3 313 aa9.57□□□□□ -0.88
ACTN1-208ENST00000553370 MSL3P1P0C860 447 aa9.57□□□□□ -0.88
ACTN1-208ENST00000553370 TPH1P17752 444 aa9.57□□□□□ -0.88
ACTN1-208ENST00000553370 ALAS2P22557 587 aa9.57□□□□□ -0.88
ACTN1-208ENST00000553370 PDHA2P29803 388 aa9.57□□□□□ -0.88
ACTN1-208ENST00000553370 CTNNA1P35221 906 aaKnown RBP9.57□□□□□ -0.88
ACTN1-208ENST00000553370 ADRA1AP35348 466 aa9.57□□□□□ -0.88
Retrieved 100 of 20,778 RNA–protein pairs in 35.3 ms