RNA–Protein interactions for RNA: ENST00000553308.1

SYNE2-209, Transcript of spectrin repeat containing nuclear envelope protein 2, humanhuman

TSL 4

Gene SYNE2, Length 557 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SYNE2-209ENST00000553308 LUZP1Q86V48 1076 aa8.73□□□□□ -1.01
SYNE2-209ENST00000553308 ZGRF1Q86YA3 2104 aa8.73□□□□□ -1.01
SYNE2-209ENST00000553308 CLDN19Q8N6F1 224 aa8.73□□□□□ -1.01
SYNE2-209ENST00000553308 COG1Q8WTW3 980 aa8.73□□□□□ -1.01
SYNE2-209ENST00000553308 ITLN2Q8WWU7 325 aaPredicted RBP8.73□□□□□ -1.01
SYNE2-209ENST00000553308 FKBP10Q96AY3 582 aa8.73□□□□□ -1.01
SYNE2-209ENST00000553308 IQCDQ96DY2 449 aa8.73□□□□□ -1.01
SYNE2-209ENST00000553308 THOC3Q96J01 351 aaKnown RBP8.73□□□□□ -1.01
SYNE2-209ENST00000553308 DNAJC1Q96KC8 554 aaKnown RBP8.73□□□□□ -1.01
SYNE2-209ENST00000553308 SPSB2Q99619 263 aa8.73□□□□□ -1.01
SYNE2-209ENST00000553308 MESP1Q9BRJ9 268 aa8.73□□□□□ -1.01
SYNE2-209ENST00000553308 CHRNA10Q9GZZ6 450 aa8.73□□□□□ -1.01
SYNE2-209ENST00000553308 LHPPQ9H008 270 aa8.73□□□□□ -1.01
SYNE2-209ENST00000553308 SOX17Q9H6I2 414 aaPredicted RBP8.73□□□□□ -1.01
SYNE2-209ENST00000553308 EPS8L2Q9H6S3 715 aa8.73□□□□□ -1.01
SYNE2-209ENST00000553308 VPS37BQ9H9H4 285 aa8.73□□□□□ -1.01
SYNE2-209ENST00000553308 OLAHQ9NV23 265 aa8.73□□□□□ -1.01
SYNE2-209ENST00000553308 ZDHHC3Q9NYG2 299 aa8.73□□□□□ -1.01
SYNE2-209ENST00000553308 CTSFQ9UBX1 484 aa8.73□□□□□ -1.01
SYNE2-209ENST00000553308 PLCL2Q9UPR0 1127 aa8.73□□□□□ -1.01
SYNE2-209ENST00000553308 ASF1AQ9Y294 204 aa8.73□□□□□ -1.01
SYNE2-209ENST00000553308 KLHL20Q9Y2M5 609 aa8.73□□□□□ -1.01
SYNE2-209ENST00000553308 TDRKHQ9Y2W6 561 aaKnown RBP8.73□□□□□ -1.01
SYNE2-209ENST00000553308 ANKRD12Q6UB98 2062 aa8.73□□□□□ -1.01
SYNE2-209ENST00000553308 hCG_1818297A0A087WSY0 165 aa8.72□□□□□ -1.01
SYNE2-209ENST00000553308 TRBV5-4A0A0C4DH59 114 aa8.72□□□□□ -1.01
SYNE2-209ENST00000553308 A0A1B0GX78 115 aa8.72□□□□□ -1.01
SYNE2-209ENST00000553308 ISM1B1AKI9 464 aa8.72□□□□□ -1.01
SYNE2-209ENST00000553308 SPOPO43791 374 aa8.72□□□□□ -1.01
SYNE2-209ENST00000553308 ANXA9O76027 345 aa8.72□□□□□ -1.01
SYNE2-209ENST00000553308 KLHL18O94889 574 aa8.72□□□□□ -1.01
SYNE2-209ENST00000553308 CRTAMO95727 393 aa8.72□□□□□ -1.01
SYNE2-209ENST00000553308 MAGP20916 626 aa8.72□□□□□ -1.01
SYNE2-209ENST00000553308 ACRV1P26436 265 aa8.72□□□□□ -1.01
SYNE2-209ENST00000553308 PSMB4P28070 264 aa8.72□□□□□ -1.01
SYNE2-209ENST00000553308 ACADLP28330 430 aa8.72□□□□□ -1.01
SYNE2-209ENST00000553308 RBL1P28749 1068 aa8.72□□□□□ -1.01
SYNE2-209ENST00000553308 TDGF1P3P51864 188 aa8.72□□□□□ -1.01
SYNE2-209ENST00000553308 MFAP5Q13361 173 aa8.72□□□□□ -1.01
SYNE2-209ENST00000553308 ART3Q13508 389 aa8.72□□□□□ -1.01
SYNE2-209ENST00000553308 BRD3Q15059 726 aa8.72□□□□□ -1.01
SYNE2-209ENST00000553308 SLC5A12Q1EHB4 618 aa8.72□□□□□ -1.01
SYNE2-209ENST00000553308 ZNF324BQ6AW86 544 aaPredicted RBP8.72□□□□□ -1.01
SYNE2-209ENST00000553308 ZNF449Q6P9G9 518 aa8.72□□□□□ -1.01
SYNE2-209ENST00000553308 ISLR2Q6UXK2 745 aa8.72□□□□□ -1.01
SYNE2-209ENST00000553308 NAPRTQ6XQN6 538 aa8.72□□□□□ -1.01
SYNE2-209ENST00000553308 OVCH1Q7RTY7 1134 aa8.72□□□□□ -1.01
SYNE2-209ENST00000553308 GDF7Q7Z4P5 450 aa8.72□□□□□ -1.01
SYNE2-209ENST00000553308 SERPINA9Q86WD7 417 aa8.72□□□□□ -1.01
SYNE2-209ENST00000553308 RHOT2Q8IXI1 618 aa8.72□□□□□ -1.01
SYNE2-209ENST00000553308 DTWD1Q8N5C7 304 aa8.72□□□□□ -1.01
SYNE2-209ENST00000553308 METTL27Q8N6F8 245 aaPredicted RBP8.72□□□□□ -1.01
SYNE2-209ENST00000553308 BCORP1Q8N888 145 aa8.72□□□□□ -1.01
SYNE2-209ENST00000553308 OR11G2Q8NGC1 345 aa8.72□□□□□ -1.01
SYNE2-209ENST00000553308 HEXDCQ8WVB3 486 aa8.72□□□□□ -1.01
SYNE2-209ENST00000553308 DLG3Q92796 817 aa8.72□□□□□ -1.01
SYNE2-209ENST00000553308 RELTQ969Z4 430 aa8.72□□□□□ -1.01
SYNE2-209ENST00000553308 NACC2Q96BF6 587 aa8.72□□□□□ -1.01
SYNE2-209ENST00000553308 LURAP1Q96LR2 239 aa8.72□□□□□ -1.01
SYNE2-209ENST00000553308 MAGEB10Q96LZ2 347 aaPredicted RBP8.72□□□□□ -1.01
SYNE2-209ENST00000553308 GOLPH3Q9H4A6 298 aa8.72□□□□□ -1.01
SYNE2-209ENST00000553308 RUBCNLQ9H714 662 aa8.72□□□□□ -1.01
SYNE2-209ENST00000553308 WDR54Q9H977 334 aa8.72□□□□□ -1.01
SYNE2-209ENST00000553308 SPTLC3Q9NUV7 552 aa8.72□□□□□ -1.01
SYNE2-209ENST00000553308 EURLQ9NYK6 297 aa8.72□□□□□ -1.01
SYNE2-209ENST00000553308 OR6C2Q9NZP2 312 aa8.72□□□□□ -1.01
SYNE2-209ENST00000553308 TRHDEQ9UKU6 1024 aa8.72□□□□□ -1.01
SYNE2-209ENST00000553308 PRSS21Q9Y6M0 314 aa8.72□□□□□ -1.01
SYNE2-209ENST00000553308 FBN2P35556 2912 aa8.72□□□□□ -1.01
SYNE2-209ENST00000553308 F8P00451 2351 aa8.71□□□□□ -1.01
SYNE2-209ENST00000553308 C2CD3Q4AC94 2353 aa8.71□□□□□ -1.01
SYNE2-209ENST00000553308 SVILO95425 2214 aa8.71□□□□□ -1.02
SYNE2-209ENST00000553308 HACD1B0YJ81 288 aa8.71□□□□□ -1.02
SYNE2-209ENST00000553308 GOLGA6L22H0YM25 854 aa8.71□□□□□ -1.02
SYNE2-209ENST00000553308 H7C0C1 242 aa8.71□□□□□ -1.02
SYNE2-209ENST00000553308 LIN7AO14910 233 aaPredicted RBP8.71□□□□□ -1.02
SYNE2-209ENST00000553308 PCDH17O14917 1159 aa8.71□□□□□ -1.02
SYNE2-209ENST00000553308 DSCR3O14972 297 aa8.71□□□□□ -1.02
SYNE2-209ENST00000553308 AKR1B10O60218 316 aa8.71□□□□□ -1.02
SYNE2-209ENST00000553308 ALBP02768 609 aa8.71□□□□□ -1.02
SYNE2-209ENST00000553308 MCM3P25205 808 aa8.71□□□□□ -1.02
SYNE2-209ENST00000553308 SLC1A1P43005 524 aa8.71□□□□□ -1.02
SYNE2-209ENST00000553308 ATP5OP48047 213 aa8.71□□□□□ -1.02
SYNE2-209ENST00000553308 MARCKSL1P49006 195 aa8.71□□□□□ -1.02
SYNE2-209ENST00000553308 SRSF11Q05519 484 aaKnown RBP8.71□□□□□ -1.02
SYNE2-209ENST00000553308 SPARCL1Q14515 664 aa8.71□□□□□ -1.02
SYNE2-209ENST00000553308 RBBP7Q16576 425 aa8.71□□□□□ -1.02
SYNE2-209ENST00000553308 DBN1Q16643 649 aa8.71□□□□□ -1.02
SYNE2-209ENST00000553308 GPR33Q49SQ1 333 aa8.71□□□□□ -1.02
SYNE2-209ENST00000553308 TFDP3Q5H9I0 405 aa8.71□□□□□ -1.02
SYNE2-209ENST00000553308 FCRL6Q6DN72 434 aa8.71□□□□□ -1.02
SYNE2-209ENST00000553308 ITPRIPL1Q6GPH6 555 aa8.71□□□□□ -1.02
SYNE2-209ENST00000553308 DENND5AQ6IQ26 1287 aa8.71□□□□□ -1.02
SYNE2-209ENST00000553308 RPUSD3Q6P087 351 aaKnown RBP8.71□□□□□ -1.02
SYNE2-209ENST00000553308 TAS2R42Q7RTR8 314 aa8.71□□□□□ -1.02
SYNE2-209ENST00000553308 CCDC50Q8IVM0 306 aa8.71□□□□□ -1.02
SYNE2-209ENST00000553308 MCATQ8IVS2 390 aaKnown RBP8.71□□□□□ -1.02
SYNE2-209ENST00000553308 PIANPQ8IYJ0 282 aa8.71□□□□□ -1.02
SYNE2-209ENST00000553308 TBC1D21Q8IYX1 336 aa8.71□□□□□ -1.02
SYNE2-209ENST00000553308 LMNTD1Q8N9Z9 388 aa8.71□□□□□ -1.02
Retrieved 100 of 20,778 RNA–protein pairs in 22.8 ms