RNA–Protein interactions for RNA: ENST00000552480.1

CACNB3-223, Transcript of calcium voltage-gated channel auxiliary subunit beta 3, human

TSL 3

Gene CACNB3, Length 927 nt, Biotype retained intron, Subcellular localisation Ribosome .

RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
CACNB3-223	ENST00000552480	LBP	P18428	481 aa		12.35	□□□□□ -0.43
CACNB3-223	ENST00000552480	EPOR	P19235	508 aa		12.35	□□□□□ -0.43
CACNB3-223	ENST00000552480	PIK3R1	P27986	724 aa		12.35	□□□□□ -0.43
CACNB3-223	ENST00000552480	NUDT1	P36639	197 aa		12.35	□□□□□ -0.43
CACNB3-223	ENST00000552480	CLDN2	P57739	230 aa		12.35	□□□□□ -0.43
CACNB3-223	ENST00000552480	YPEL5	P62699	121 aa		12.35	□□□□□ -0.43
CACNB3-223	ENST00000552480	NFATC4	Q14934	902 aa		12.35	□□□□□ -0.43
CACNB3-223	ENST00000552480	HERC3	Q15034	1050 aa		12.35	□□□□□ -0.43
CACNB3-223	ENST00000552480	PYCR3	Q53H96	274 aa		12.35	□□□□□ -0.43
CACNB3-223	ENST00000552480	GCNT7	Q6ZNI0	430 aa		12.35	□□□□□ -0.43
CACNB3-223	ENST00000552480	CHST15	Q7LFX5	561 aa	Predicted RBP	12.35	□□□□□ -0.43
CACNB3-223	ENST00000552480	THOC6	Q86W42	341 aa	Known RBP	12.35	□□□□□ -0.43
CACNB3-223	ENST00000552480	UBALD2	Q8IYN6	164 aa		12.35	□□□□□ -0.43
CACNB3-223	ENST00000552480	DCBLD1	Q8N8Z6	715 aa		12.35	□□□□□ -0.43
CACNB3-223	ENST00000552480	L3MBTL4	Q8NA19	623 aa		12.35	□□□□□ -0.43
CACNB3-223	ENST00000552480	OR9A1P	Q8NGU1	263 aa		12.35	□□□□□ -0.43
CACNB3-223	ENST00000552480	OR56A3	Q8NH54	315 aa		12.35	□□□□□ -0.43
CACNB3-223	ENST00000552480	TOE1	Q96GM8	510 aa	Known RBP	12.35	□□□□□ -0.43
CACNB3-223	ENST00000552480	MARK4	Q96L34	752 aa		12.35	□□□□□ -0.43
CACNB3-223	ENST00000552480	WDR92	Q96MX6	357 aa		12.35	□□□□□ -0.43
CACNB3-223	ENST00000552480	HHIP	Q96QV1	700 aa		12.35	□□□□□ -0.43
CACNB3-223	ENST00000552480	FOXQ1	Q9C009	403 aa		12.35	□□□□□ -0.43
CACNB3-223	ENST00000552480	ATG10	Q9H0Y0	220 aa		12.35	□□□□□ -0.43
CACNB3-223	ENST00000552480	C6orf106	Q9H6K1	298 aa	Predicted RBP	12.35	□□□□□ -0.43
CACNB3-223	ENST00000552480	ACTR8	Q9H981	624 aa		12.35	□□□□□ -0.43
CACNB3-223	ENST00000552480	C2orf42	Q9NWW7	574 aa		12.35	□□□□□ -0.43
CACNB3-223	ENST00000552480	WSB2	Q9NYS7	404 aa	Predicted RBP	12.35	□□□□□ -0.43
CACNB3-223	ENST00000552480	SUFU	Q9UMX1	484 aa		12.35	□□□□□ -0.43
CACNB3-223	ENST00000552480	G3BP2	Q9UN86	482 aa	Known RBP	12.35	□□□□□ -0.43
CACNB3-223	ENST00000552480	HS3ST3A1	Q9Y663	406 aa		12.35	□□□□□ -0.43
CACNB3-223	ENST00000552480	SZT2	Q5T011	3432 aa		12.34	□□□□□ -0.43
CACNB3-223	ENST00000552480	ZFC3H1	O60293	1989 aa	Known RBP	12.34	□□□□□ -0.43
CACNB3-223	ENST00000552480	ATP6AP2	A0A1C7CYW4	349 aa		12.34	□□□□□ -0.43
CACNB3-223	ENST00000552480	PRSS38	A1L453	326 aa		12.34	□□□□□ -0.43
CACNB3-223	ENST00000552480	PRR19	A6NJB7	356 aa		12.34	□□□□□ -0.43
CACNB3-223	ENST00000552480	ZNF217	O75362	1048 aa		12.34	□□□□□ -0.43
CACNB3-223	ENST00000552480	ATP6AP2	O75787	350 aa		12.34	□□□□□ -0.43
CACNB3-223	ENST00000552480	SLC16A8	O95907	504 aa		12.34	□□□□□ -0.43
CACNB3-223	ENST00000552480	IGHV4-34	P06331	123 aa		12.34	□□□□□ -0.43
CACNB3-223	ENST00000552480	SLC35G4	P0C7Q5	338 aa		12.34	□□□□□ -0.43
CACNB3-223	ENST00000552480	PRR35	P0CG20	571 aa		12.34	□□□□□ -0.43
CACNB3-223	ENST00000552480	COX4I1	P13073	169 aa		12.34	□□□□□ -0.43
CACNB3-223	ENST00000552480	ACP5	P13686	325 aa		12.34	□□□□□ -0.43
CACNB3-223	ENST00000552480	ITPKA	P23677	461 aa		12.34	□□□□□ -0.43
CACNB3-223	ENST00000552480	HTR1B	P28222	390 aa		12.34	□□□□□ -0.43
CACNB3-223	ENST00000552480	CD6	P30203	668 aa		12.34	□□□□□ -0.43
CACNB3-223	ENST00000552480	GNPDA1	P46926	289 aa		12.34	□□□□□ -0.43
CACNB3-223	ENST00000552480	HTR6	P50406	440 aa		12.34	□□□□□ -0.43
CACNB3-223	ENST00000552480	MNAT1	P51948	309 aa		12.34	□□□□□ -0.43
CACNB3-223	ENST00000552480	PCDH1	Q08174	1060 aa		12.34	□□□□□ -0.43
CACNB3-223	ENST00000552480	NAE1	Q13564	534 aa		12.34	□□□□□ -0.43
CACNB3-223	ENST00000552480	TCHHL1	Q5QJ38	904 aa	Predicted RBP	12.34	□□□□□ -0.43
CACNB3-223	ENST00000552480	CAPRIN2	Q6IMN6	1127 aa	Known RBP	12.34	□□□□□ -0.43
CACNB3-223	ENST00000552480	OGFOD2	Q6N063	350 aa		12.34	□□□□□ -0.43
CACNB3-223	ENST00000552480	IL27RA	Q6UWB1	636 aa		12.34	□□□□□ -0.43
CACNB3-223	ENST00000552480	RINL	Q6ZS11	566 aa		12.34	□□□□□ -0.43
CACNB3-223	ENST00000552480	SPATA19	Q7Z5L4	167 aa		12.34	□□□□□ -0.43
CACNB3-223	ENST00000552480	DCUN1D3	Q8IWE4	304 aa		12.34	□□□□□ -0.43
CACNB3-223	ENST00000552480	KIF2B	Q8N4N8	673 aa		12.34	□□□□□ -0.43
CACNB3-223	ENST00000552480	TFG	Q92734	400 aa	Predicted RBP	12.34	□□□□□ -0.43
CACNB3-223	ENST00000552480	PYCR2	Q96C36	320 aa		12.34	□□□□□ -0.43
CACNB3-223	ENST00000552480	TUBGCP3	Q96CW5	907 aa		12.34	□□□□□ -0.43
CACNB3-223	ENST00000552480	BMF	Q96LC9	184 aa		12.34	□□□□□ -0.43
CACNB3-223	ENST00000552480	OR2M4	Q96R27	311 aa		12.34	□□□□□ -0.43
CACNB3-223	ENST00000552480	BTBD10	Q9BSF8	475 aa		12.34	□□□□□ -0.43
CACNB3-223	ENST00000552480	TBC1D17	Q9HA65	648 aa		12.34	□□□□□ -0.43
CACNB3-223	ENST00000552480	FGF22	Q9HCT0	170 aa		12.34	□□□□□ -0.43
CACNB3-223	ENST00000552480	MOSPD1	Q9UJG1	213 aa		12.34	□□□□□ -0.43
CACNB3-223	ENST00000552480	DMTF1	Q9Y222	760 aa		12.34	□□□□□ -0.43
CACNB3-223	ENST00000552480	SLC22A14	Q9Y267	594 aa		12.34	□□□□□ -0.43
CACNB3-223	ENST00000552480	ASF1A	Q9Y294	204 aa		12.34	□□□□□ -0.43
CACNB3-223	ENST00000552480	CA5B	Q9Y2D0	317 aa		12.34	□□□□□ -0.43
CACNB3-223	ENST00000552480	RNF11	Q9Y3C5	154 aa		12.34	□□□□□ -0.43
CACNB3-223	ENST00000552480	GPSM3	Q9Y4H4	160 aa		12.34	□□□□□ -0.43
CACNB3-223	ENST00000552480	SPTBN5	Q9NRC6	3674 aa	Known RBP	12.33	□□□□□ -0.44
CACNB3-223	ENST00000552480	KCNE1B	A0A087WTH5	132 aa		12.33	□□□□□ -0.44
CACNB3-223	ENST00000552480	PRAMEF26	H0Y7S4	382 aa		12.33	□□□□□ -0.44
CACNB3-223	ENST00000552480		H0Y8X5	98 aa		12.33	□□□□□ -0.44
CACNB3-223	ENST00000552480	MANBA	O00462	879 aa		12.33	□□□□□ -0.44
CACNB3-223	ENST00000552480	TNFRSF10C	O14798	259 aa		12.33	□□□□□ -0.44
CACNB3-223	ENST00000552480	CLGN	O14967	610 aa		12.33	□□□□□ -0.44
CACNB3-223	ENST00000552480	UGDH	O60701	494 aa		12.33	□□□□□ -0.44
CACNB3-223	ENST00000552480	KRT6A	P02538	564 aa		12.33	□□□□□ -0.44
CACNB3-223	ENST00000552480	KRT6B	P04259	564 aa		12.33	□□□□□ -0.44
CACNB3-223	ENST00000552480	THRA	P10827	490 aa		12.33	□□□□□ -0.44
CACNB3-223	ENST00000552480	CPA2	P48052	419 aa		12.33	□□□□□ -0.44
CACNB3-223	ENST00000552480	KRT6C	P48668	564 aa		12.33	□□□□□ -0.44
CACNB3-223	ENST00000552480	MRPL19	P49406	292 aa	Known RBP	12.33	□□□□□ -0.44
CACNB3-223	ENST00000552480	STX1B	P61266	288 aa		12.33	□□□□□ -0.44
CACNB3-223	ENST00000552480	KCNJ2	P63252	427 aa		12.33	□□□□□ -0.44
CACNB3-223	ENST00000552480	GRB7	Q14451	532 aa		12.33	□□□□□ -0.44
CACNB3-223	ENST00000552480	GSTA3	Q16772	222 aa		12.33	□□□□□ -0.44
CACNB3-223	ENST00000552480	CAPN13	Q6MZZ7	669 aa	Predicted RBP	12.33	□□□□□ -0.44
CACNB3-223	ENST00000552480	ENPP7	Q6UWV6	458 aa		12.33	□□□□□ -0.44
CACNB3-223	ENST00000552480	SPEM1	Q8N4L4	309 aa		12.33	□□□□□ -0.44
CACNB3-223	ENST00000552480	POU5F2	Q8N7G0	328 aa		12.33	□□□□□ -0.44
CACNB3-223	ENST00000552480	TMEM145	Q8NBT3	493 aa		12.33	□□□□□ -0.44
CACNB3-223	ENST00000552480	SPDYE1	Q8NFV5	336 aa	Predicted RBP	12.33	□□□□□ -0.44
CACNB3-223	ENST00000552480	OR5AR1	Q8NGP9	310 aa		12.33	□□□□□ -0.44
CACNB3-223	ENST00000552480	OR5K2	Q8NHB8	316 aa		12.33	□□□□□ -0.44

Retrieved 100 of 20,778 RNA–protein pairs in 67.1 ms