RNA–Protein interactions for RNA: ENST00000552000.2

HOXB3-213, Transcript of homeobox B3, humanhuman

TSL 3

Gene HOXB3, Length 466 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HOXB3-213ENST00000552000 MCCC2Q9HCC0 563 aa5.19□□□□□ -1.58
HOXB3-213ENST00000552000 SLC6A20Q9NP91 592 aa5.19□□□□□ -1.58
HOXB3-213ENST00000552000 NLRC4Q9NPP4 1024 aa5.19□□□□□ -1.58
HOXB3-213ENST00000552000 NDOR1Q9UHB4 597 aa5.19□□□□□ -1.58
HOXB3-213ENST00000552000 SERTAD3Q9UJW9 196 aa5.19□□□□□ -1.58
HOXB3-213ENST00000552000 POMT2Q9UKY4 750 aa5.19□□□□□ -1.58
HOXB3-213ENST00000552000 TMPRSS11EQ9UL52 423 aa5.19□□□□□ -1.58
HOXB3-213ENST00000552000 SHOC2Q9UQ13 582 aa5.19□□□□□ -1.58
HOXB3-213ENST00000552000 CDYLQ9Y232 598 aa5.19□□□□□ -1.58
HOXB3-213ENST00000552000 PCDHGB6Q9Y5F9 930 aa5.19□□□□□ -1.58
HOXB3-213ENST00000552000 ABCA1O95477 2261 aa5.18□□□□□ -1.58
HOXB3-213ENST00000552000 GSAPA4D1B5 854 aa5.18□□□□□ -1.58
HOXB3-213ENST00000552000 KRTAP9-7A8MTY7 169 aa5.18□□□□□ -1.58
HOXB3-213ENST00000552000 AGPSO00116 658 aa5.18□□□□□ -1.58
HOXB3-213ENST00000552000 EPHB6O15197 1021 aa5.18□□□□□ -1.58
HOXB3-213ENST00000552000 POP7O75817 140 aaKnown RBP5.18□□□□□ -1.58
HOXB3-213ENST00000552000 FAM155BO75949 473 aa5.18□□□□□ -1.58
HOXB3-213ENST00000552000 CLDN14O95500 239 aa5.18□□□□□ -1.58
HOXB3-213ENST00000552000 HBQ1P09105 142 aa5.18□□□□□ -1.58
HOXB3-213ENST00000552000 ESRRAP11474 423 aaPredicted RBP5.18□□□□□ -1.58
HOXB3-213ENST00000552000 MTHFD1P11586 935 aaKnown RBP5.18□□□□□ -1.58
HOXB3-213ENST00000552000 PVRP15151 417 aa5.18□□□□□ -1.58
HOXB3-213ENST00000552000 HLA-DPA1P20036 260 aa5.18□□□□□ -1.58
HOXB3-213ENST00000552000 CA4P22748 312 aa5.18□□□□□ -1.58
HOXB3-213ENST00000552000 PBLDP30039 288 aaPredicted RBP5.18□□□□□ -1.58
HOXB3-213ENST00000552000 KLK7P49862 253 aa5.18□□□□□ -1.58
HOXB3-213ENST00000552000 ZNF135P52742 658 aaPredicted RBP5.18□□□□□ -1.58
HOXB3-213ENST00000552000 SMSP52788 366 aa5.18□□□□□ -1.58
HOXB3-213ENST00000552000 CTSCP53634 463 aa5.18□□□□□ -1.58
HOXB3-213ENST00000552000 JAM2P57087 298 aa5.18□□□□□ -1.58
HOXB3-213ENST00000552000 DCDC1P59894 354 aa5.18□□□□□ -1.58
HOXB3-213ENST00000552000 RPL26P61254 145 aaKnown RBP5.18□□□□□ -1.58
HOXB3-213ENST00000552000 PRKAA1Q13131 559 aa5.18□□□□□ -1.58
HOXB3-213ENST00000552000 XRCC4Q13426 336 aa5.18□□□□□ -1.58
HOXB3-213ENST00000552000 MAMLD1Q13495 774 aa5.18□□□□□ -1.58
HOXB3-213ENST00000552000 GTF2H3Q13889 308 aa5.18□□□□□ -1.58
HOXB3-213ENST00000552000 NFE2L1Q14494 772 aa5.18□□□□□ -1.58
HOXB3-213ENST00000552000 SYCP1Q15431 976 aa5.18□□□□□ -1.58
HOXB3-213ENST00000552000 PDPK2PQ6A1A2 396 aa5.18□□□□□ -1.58
HOXB3-213ENST00000552000 FAAH2Q6GMR7 532 aa5.18□□□□□ -1.58
HOXB3-213ENST00000552000 ALG1LQ6GMV1 187 aa5.18□□□□□ -1.58
HOXB3-213ENST00000552000 MEX3BQ6ZN04 569 aaKnown RBP5.18□□□□□ -1.58
HOXB3-213ENST00000552000 POLNQ7Z5Q5 900 aa5.18□□□□□ -1.58
HOXB3-213ENST00000552000 PSTKQ8IV42 348 aaKnown RBP5.18□□□□□ -1.58
HOXB3-213ENST00000552000 GPR135Q8IZ08 494 aa5.18□□□□□ -1.58
HOXB3-213ENST00000552000 MCOLN2Q8IZK6 566 aa5.18□□□□□ -1.58
HOXB3-213ENST00000552000 CARFQ8N187 725 aa5.18□□□□□ -1.58
HOXB3-213ENST00000552000 TEX26Q8N6G2 289 aa5.18□□□□□ -1.58
HOXB3-213ENST00000552000 OR4E2Q8NGC2 313 aa5.18□□□□□ -1.58
HOXB3-213ENST00000552000 ARRDC2Q8TBH0 407 aa5.18□□□□□ -1.58
HOXB3-213ENST00000552000 HSPH1Q92598 858 aa5.18□□□□□ -1.58
HOXB3-213ENST00000552000 N4BP2L2Q92802 583 aaPredicted RBP5.18□□□□□ -1.58
HOXB3-213ENST00000552000 C12orf66Q96MD2 445 aa5.18□□□□□ -1.58
HOXB3-213ENST00000552000 CSPG4P5Q96PW8 444 aa5.18□□□□□ -1.58
HOXB3-213ENST00000552000 NRTNQ99748 197 aa5.18□□□□□ -1.58
HOXB3-213ENST00000552000 C17orf62Q9BQA9 187 aa5.18□□□□□ -1.58
HOXB3-213ENST00000552000 NDC1Q9BTX1 674 aa5.18□□□□□ -1.58
HOXB3-213ENST00000552000 YIPF2Q9BWQ6 316 aa5.18□□□□□ -1.58
HOXB3-213ENST00000552000 TRIM7Q9C029 511 aa5.18□□□□□ -1.58
HOXB3-213ENST00000552000 LHPPQ9H008 270 aa5.18□□□□□ -1.58
HOXB3-213ENST00000552000 SPRTNQ9H040 489 aaPredicted RBP5.18□□□□□ -1.58
HOXB3-213ENST00000552000 WWP1Q9H0M0 922 aa5.18□□□□□ -1.58
HOXB3-213ENST00000552000 DEF6Q9H4E7 631 aa5.18□□□□□ -1.58
HOXB3-213ENST00000552000 ZWILCHQ9H900 591 aa5.18□□□□□ -1.58
HOXB3-213ENST00000552000 ZFYVE1Q9HBF4 777 aa5.18□□□□□ -1.58
HOXB3-213ENST00000552000 SYTL2Q9HCH5 934 aa5.18□□□□□ -1.58
HOXB3-213ENST00000552000 C1GALT1Q9NS00 363 aa5.18□□□□□ -1.58
HOXB3-213ENST00000552000 RBM22Q9NW64 420 aaKnown RBP eCLIP5.18□□□□□ -1.58
HOXB3-213ENST00000552000 IFT80Q9P2H3 777 aaPredicted RBP5.18□□□□□ -1.58
HOXB3-213ENST00000552000 DHCR7Q9UBM7 475 aaKnown RBP5.18□□□□□ -1.58
HOXB3-213ENST00000552000 FAM8A1Q9UBU6 413 aa5.18□□□□□ -1.58
HOXB3-213ENST00000552000 SLC24A2Q9UI40 661 aa5.18□□□□□ -1.58
HOXB3-213ENST00000552000 RPL26L1Q9UNX3 145 aaKnown RBP5.18□□□□□ -1.58
HOXB3-213ENST00000552000 TRAV17A0A0B4J275 112 aa5.17□□□□□ -1.58
HOXB3-213ENST00000552000 TMCO5BA8MYB1 307 aa5.17□□□□□ -1.58
HOXB3-213ENST00000552000 ANKRD66B4E2M5 251 aa5.17□□□□□ -1.58
HOXB3-213ENST00000552000 SOCS6O14544 535 aa5.17□□□□□ -1.58
HOXB3-213ENST00000552000 KCNJ13O60928 360 aa5.17□□□□□ -1.58
HOXB3-213ENST00000552000 OR2B3O76000 313 aa5.17□□□□□ -1.58
HOXB3-213ENST00000552000 RNF8O76064 485 aa5.17□□□□□ -1.58
HOXB3-213ENST00000552000 KLHL18O94889 574 aa5.17□□□□□ -1.58
HOXB3-213ENST00000552000 HLA-DQB2P05538 268 aa5.17□□□□□ -1.58
HOXB3-213ENST00000552000 CTSBP07858 339 aa5.17□□□□□ -1.58
HOXB3-213ENST00000552000 MMP2P08253 660 aa5.17□□□□□ -1.58
HOXB3-213ENST00000552000 CD63P08962 238 aa5.17□□□□□ -1.58
HOXB3-213ENST00000552000 MSL3P1P0C860 447 aa5.17□□□□□ -1.58
HOXB3-213ENST00000552000 TCF4P15884 667 aa5.17□□□□□ -1.58
HOXB3-213ENST00000552000 CES1P23141 567 aa5.17□□□□□ -1.58
HOXB3-213ENST00000552000 MMP11P24347 488 aa5.17□□□□□ -1.58
HOXB3-213ENST00000552000 MST1P26927 711 aa5.17□□□□□ -1.58
HOXB3-213ENST00000552000 IL1R2P27930 398 aa5.17□□□□□ -1.58
HOXB3-213ENST00000552000 PRDX3P30048 256 aaKnown RBP5.17□□□□□ -1.58
HOXB3-213ENST00000552000 SERPINB6P35237 376 aa5.17□□□□□ -1.58
HOXB3-213ENST00000552000 CD86P42081 329 aa5.17□□□□□ -1.58
HOXB3-213ENST00000552000 CASP6P55212 293 aa5.17□□□□□ -1.58
HOXB3-213ENST00000552000 CSNK1G2P78368 415 aa5.17□□□□□ -1.58
HOXB3-213ENST00000552000 ARG2P78540 354 aa5.17□□□□□ -1.58
HOXB3-213ENST00000552000 DCDP81605 110 aaKnown RBP5.17□□□□□ -1.58
HOXB3-213ENST00000552000 RBPJQ06330 500 aa5.17□□□□□ -1.58
HOXB3-213ENST00000552000 DMPKQ09013 629 aa5.17□□□□□ -1.58
Retrieved 100 of 20,778 RNA–protein pairs in 24.3 ms