RNA–Protein interactions for RNA: ENST00000550592.1

LIMA1-205, Transcript of LIM domain and actin binding 1, humanhuman

TSL 4

Gene LIMA1, Length 567 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LIMA1-205ENST00000550592 ART1P52961 327 aa4.66□□□□□ -1.66
LIMA1-205ENST00000550592 LIMK1P53667 647 aa4.66□□□□□ -1.66
LIMA1-205ENST00000550592 MLLT10P55197 1068 aa4.66□□□□□ -1.66
LIMA1-205ENST00000550592 HNRNPKP61978 463 aaKnown RBP eCLIP4.66□□□□□ -1.66
LIMA1-205ENST00000550592 IRX6P78412 446 aaPredicted RBP4.66□□□□□ -1.66
LIMA1-205ENST00000550592 ZXDBP98169 803 aa4.66□□□□□ -1.66
LIMA1-205ENST00000550592 PNRC1Q12796 327 aaPredicted RBP4.66□□□□□ -1.66
LIMA1-205ENST00000550592 KEAP1Q14145 624 aa4.66□□□□□ -1.66
LIMA1-205ENST00000550592 HYAL4Q2M3T9 481 aa4.66□□□□□ -1.66
LIMA1-205ENST00000550592 VWC2Q2TAL6 325 aa4.66□□□□□ -1.66
LIMA1-205ENST00000550592 KLHL26Q53HC5 615 aa4.66□□□□□ -1.66
LIMA1-205ENST00000550592 GRTP1Q5TC63 336 aa4.66□□□□□ -1.66
LIMA1-205ENST00000550592 PLXDC2Q6UX71 529 aa4.66□□□□□ -1.66
LIMA1-205ENST00000550592 MEPCEQ7L2J0 689 aaKnown RBP4.66□□□□□ -1.66
LIMA1-205ENST00000550592 ZDHHC17Q8IUH5 632 aa4.66□□□□□ -1.66
LIMA1-205ENST00000550592 SAMD14Q8IZD0 417 aaPredicted RBP4.66□□□□□ -1.66
LIMA1-205ENST00000550592 TTC30BQ8N4P2 665 aa4.66□□□□□ -1.66
LIMA1-205ENST00000550592 KIF18AQ8NI77 898 aa4.66□□□□□ -1.66
LIMA1-205ENST00000550592 ZFAND2BQ8WV99 257 aa4.66□□□□□ -1.66
LIMA1-205ENST00000550592 NUDCD2Q8WVJ2 157 aa4.66□□□□□ -1.66
LIMA1-205ENST00000550592 MRPS27Q92552 414 aaKnown RBP4.66□□□□□ -1.66
LIMA1-205ENST00000550592 SEMA4DQ92854 862 aa4.66□□□□□ -1.66
LIMA1-205ENST00000550592 SLAMF9Q96A28 289 aa4.66□□□□□ -1.66
LIMA1-205ENST00000550592 DUX5Q96PT3 197 aa4.66□□□□□ -1.66
LIMA1-205ENST00000550592 RAB3IPQ96QF0 476 aaPredicted RBP4.66□□□□□ -1.66
LIMA1-205ENST00000550592 DPAGT1Q9H3H5 408 aa4.66□□□□□ -1.66
LIMA1-205ENST00000550592 DDX31Q9H8H2 851 aaKnown RBP4.66□□□□□ -1.66
LIMA1-205ENST00000550592 FKRPQ9H9S5 495 aa4.66□□□□□ -1.66
LIMA1-205ENST00000550592 POU2F3Q9UKI9 436 aa4.66□□□□□ -1.66
LIMA1-205ENST00000550592 ATP7BP35670 1465 aa4.66□□□□□ -1.66
LIMA1-205ENST00000550592 CUL9Q8IWT3 2517 aa4.66□□□□□ -1.66
LIMA1-205ENST00000550592 CNTNAP1P78357 1384 aa4.65□□□□□ -1.66
LIMA1-205ENST00000550592 KIAA0232Q92628 1395 aa4.65□□□□□ -1.66
LIMA1-205ENST00000550592 ANKRD30BQ9BXX2 1392 aa4.65□□□□□ -1.66
LIMA1-205ENST00000550592 PLEKHG2Q9H7P9 1386 aa4.65□□□□□ -1.66
LIMA1-205ENST00000550592 PXDNLA1KZ92 1463 aa4.65□□□□□ -1.66
LIMA1-205ENST00000550592 SAA2-SAA4A0A096LPE2 208 aa4.65□□□□□ -1.67
LIMA1-205ENST00000550592 TEX13DA0A0J9YY54 714 aaPredicted RBP4.65□□□□□ -1.67
LIMA1-205ENST00000550592 ASPDHA6ND91 283 aa4.65□□□□□ -1.67
LIMA1-205ENST00000550592 SLC28A2O43868 658 aa4.65□□□□□ -1.67
LIMA1-205ENST00000550592 PAPSS2O95340 614 aaPredicted RBP4.65□□□□□ -1.67
LIMA1-205ENST00000550592 OR2T7P0C7T2 308 aa4.65□□□□□ -1.67
LIMA1-205ENST00000550592 CSF2RAP15509 400 aa4.65□□□□□ -1.67
LIMA1-205ENST00000550592 IFNAR1P17181 557 aa4.65□□□□□ -1.67
LIMA1-205ENST00000550592 AHRP35869 848 aa4.65□□□□□ -1.67
LIMA1-205ENST00000550592 MTHFRP42898 656 aa4.65□□□□□ -1.67
LIMA1-205ENST00000550592 RBPJQ06330 500 aa4.65□□□□□ -1.67
LIMA1-205ENST00000550592 PLA2G7Q13093 441 aa4.65□□□□□ -1.67
LIMA1-205ENST00000550592 TNIP1Q15025 636 aa4.65□□□□□ -1.67
LIMA1-205ENST00000550592 PLA2G4FQ68DD2 849 aa4.65□□□□□ -1.67
LIMA1-205ENST00000550592 NADSYN1Q6IA69 706 aa4.65□□□□□ -1.67
LIMA1-205ENST00000550592 KLC3Q6P597 504 aa4.65□□□□□ -1.67
LIMA1-205ENST00000550592 FAM171BQ6P995 826 aa4.65□□□□□ -1.67
LIMA1-205ENST00000550592 UNQ6126/PRO20091Q6UXV3 157 aa4.65□□□□□ -1.67
LIMA1-205ENST00000550592 TUBA1AQ71U36 451 aa4.65□□□□□ -1.67
LIMA1-205ENST00000550592 ERN2Q76MJ5 926 aaKnown RBP4.65□□□□□ -1.67
LIMA1-205ENST00000550592 PTOV1Q86YD1 416 aa4.65□□□□□ -1.67
LIMA1-205ENST00000550592 MTERF3Q96E29 417 aa4.65□□□□□ -1.67
LIMA1-205ENST00000550592 MARK4Q96L34 752 aa4.65□□□□□ -1.67
LIMA1-205ENST00000550592 MEIS3Q99687 375 aa4.65□□□□□ -1.67
LIMA1-205ENST00000550592 SLX1AQ9BQ83 275 aa4.65□□□□□ -1.67
LIMA1-205ENST00000550592 TUBA1CQ9BQE3 449 aa4.65□□□□□ -1.67
LIMA1-205ENST00000550592 BTBD10Q9BSF8 475 aa4.65□□□□□ -1.67
LIMA1-205ENST00000550592 HIPK2Q9H2X6 1198 aa4.65□□□□□ -1.67
LIMA1-205ENST00000550592 MIOSQ9NXC5 875 aa4.65□□□□□ -1.67
LIMA1-205ENST00000550592 SLC24A2Q9UI40 661 aa4.65□□□□□ -1.67
LIMA1-205ENST00000550592 GRIP1Q9Y3R0 1128 aa4.65□□□□□ -1.67
LIMA1-205ENST00000550592 UCHL5Q9Y5K5 329 aaKnown RBP eCLIP4.65□□□□□ -1.674e-6■■■■□ 22
LIMA1-205ENST00000550592 GPRASP1Q5JY77 1395 aa4.65□□□□□ -1.67
LIMA1-205ENST00000550592 PEAK1Q9H792 1746 aa4.64□□□□□ -1.67
LIMA1-205ENST00000550592 A0A0G2JNG1 304 aa4.64□□□□□ -1.67
LIMA1-205ENST00000550592 A0A1W2PPQ1 181 aa4.64□□□□□ -1.67
LIMA1-205ENST00000550592 PRR32B1ATL7 298 aa4.64□□□□□ -1.67
LIMA1-205ENST00000550592 TRIM77I1YAP6 450 aa4.64□□□□□ -1.67
LIMA1-205ENST00000550592 TULP2O00295 520 aa4.64□□□□□ -1.67
LIMA1-205ENST00000550592 PTGESO14684 152 aa4.64□□□□□ -1.67
LIMA1-205ENST00000550592 DIAPH2O60879 1101 aa4.64□□□□□ -1.67
LIMA1-205ENST00000550592 T-ENOLP0DO92 83 aa4.64□□□□□ -1.67
LIMA1-205ENST00000550592 PLA2G2AP14555 144 aa4.64□□□□□ -1.67
LIMA1-205ENST00000550592 IL15P40933 162 aaPredicted RBP4.64□□□□□ -1.67
LIMA1-205ENST00000550592 CCR10P46092 362 aa4.64□□□□□ -1.67
LIMA1-205ENST00000550592 SLC9A3P48764 834 aa4.64□□□□□ -1.67
LIMA1-205ENST00000550592 MMP15P51511 669 aa4.64□□□□□ -1.67
LIMA1-205ENST00000550592 FUT6P51993 359 aa4.64□□□□□ -1.67
LIMA1-205ENST00000550592 RPL24P83731 157 aaKnown RBP4.64□□□□□ -1.67
LIMA1-205ENST00000550592 PPIGQ13427 754 aaKnown RBP eCLIP4.64□□□□□ -1.67
LIMA1-205ENST00000550592 KIR2DS5Q14953 304 aa4.64□□□□□ -1.67
LIMA1-205ENST00000550592 ALDH1L2Q3SY69 923 aa4.64□□□□□ -1.67
LIMA1-205ENST00000550592 HECTD3Q5T447 861 aa4.64□□□□□ -1.67
LIMA1-205ENST00000550592 LRCH2Q5VUJ6 765 aa4.64□□□□□ -1.67
LIMA1-205ENST00000550592 C9orf57Q5W0N0 161 aa4.64□□□□□ -1.67
LIMA1-205ENST00000550592 LINGO4Q6UY18 593 aa4.64□□□□□ -1.67
LIMA1-205ENST00000550592 PACS1Q6VY07 963 aa4.64□□□□□ -1.67
LIMA1-205ENST00000550592 DGLUCYQ7Z3D6 616 aa4.64□□□□□ -1.67
LIMA1-205ENST00000550592 CEP57L1Q8IYX8 460 aa4.64□□□□□ -1.67
LIMA1-205ENST00000550592 L3MBTL4Q8NA19 623 aa4.64□□□□□ -1.67
LIMA1-205ENST00000550592 CAMKVQ8NCB2 501 aa4.64□□□□□ -1.67
LIMA1-205ENST00000550592 SORCS1Q8WY21 1168 aa4.64□□□□□ -1.67
LIMA1-205ENST00000550592 DAZLQ92904 295 aaKnown RBP4.64□□□□□ -1.67
LIMA1-205ENST00000550592 SPDL1Q96EA4 605 aa4.64□□□□□ -1.67
Retrieved 100 of 20,778 RNA–protein pairs in 22.8 ms