RNA–Protein interactions for RNA: ENST00000549833.1

UBE2N-204, Transcript of ubiquitin conjugating enzyme E2 N, humanhuman

TSL 3 BASIC

Gene UBE2N, Length 960 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
UBE2N-204ENST00000549833 TAS2R38P59533 333 aa6.4□□□□□ -1.38
UBE2N-204ENST00000549833 SLC25A3Q00325 362 aa6.4□□□□□ -1.38
UBE2N-204ENST00000549833 OLIG2Q13516 323 aa6.4□□□□□ -1.38
UBE2N-204ENST00000549833 TRIP13Q15645 432 aaPredicted RBP6.4□□□□□ -1.38
UBE2N-204ENST00000549833 LPAL2Q16609 132 aa6.4□□□□□ -1.38
UBE2N-204ENST00000549833 CYP1B1Q16678 543 aa6.4□□□□□ -1.38
UBE2N-204ENST00000549833 CFAP58Q5T655 872 aa6.4□□□□□ -1.38
UBE2N-204ENST00000549833 LCE5AQ5TCM9 118 aa6.4□□□□□ -1.38
UBE2N-204ENST00000549833 ITPRIPL1Q6GPH6 555 aa6.4□□□□□ -1.38
UBE2N-204ENST00000549833 KDELC1Q6UW63 502 aa6.4□□□□□ -1.38
UBE2N-204ENST00000549833 GSTA5Q7RTV2 222 aa6.4□□□□□ -1.38
UBE2N-204ENST00000549833 TTC7BQ86TV6 843 aa6.4□□□□□ -1.38
UBE2N-204ENST00000549833 KBTBD6Q86V97 674 aa6.4□□□□□ -1.38
UBE2N-204ENST00000549833 SYT12Q8IV01 421 aa6.4□□□□□ -1.38
UBE2N-204ENST00000549833 PAF1Q8N7H5 531 aa6.4□□□□□ -1.38
UBE2N-204ENST00000549833 LPCAT1Q8NF37 534 aa6.4□□□□□ -1.38
UBE2N-204ENST00000549833 ATOH1Q92858 354 aaPredicted RBP6.4□□□□□ -1.38
UBE2N-204ENST00000549833 TADA1Q96BN2 335 aa6.4□□□□□ -1.38
UBE2N-204ENST00000549833 ECHDC3Q96DC8 303 aa6.4□□□□□ -1.38
UBE2N-204ENST00000549833 RTP4Q96DX8 246 aa6.4□□□□□ -1.38
UBE2N-204ENST00000549833 OXNAD1Q96HP4 312 aaPredicted RBP6.4□□□□□ -1.38
UBE2N-204ENST00000549833 PPP1R16AQ96I34 528 aa6.4□□□□□ -1.38
UBE2N-204ENST00000549833 LRIG1Q96JA1 1093 aa6.4□□□□□ -1.38
UBE2N-204ENST00000549833 SGCZQ96LD1 299 aa6.4□□□□□ -1.38
UBE2N-204ENST00000549833 CCDC138Q96M89 665 aa6.4□□□□□ -1.38
UBE2N-204ENST00000549833 ZNF641Q96N77 438 aaPredicted RBP6.4□□□□□ -1.38
UBE2N-204ENST00000549833 PRRX2Q99811 253 aa6.4□□□□□ -1.38
UBE2N-204ENST00000549833 FERMT1Q9BQL6 677 aa6.4□□□□□ -1.38
UBE2N-204ENST00000549833 MLPHQ9BV36 600 aaPredicted RBP6.4□□□□□ -1.38
UBE2N-204ENST00000549833 GPR174Q9BXC1 333 aa6.4□□□□□ -1.38
UBE2N-204ENST00000549833 TDRD1Q9BXT4 1180 aaKnown RBP6.4□□□□□ -1.38
UBE2N-204ENST00000549833 BTBD1Q9H0C5 482 aa6.4□□□□□ -1.38
UBE2N-204ENST00000549833 DDX47Q9H0S4 455 aaKnown RBP6.4□□□□□ -1.38
UBE2N-204ENST00000549833 C11orf54Q9H0W9 315 aaPredicted RBP6.4□□□□□ -1.38
UBE2N-204ENST00000549833 C6orf106Q9H6K1 298 aaPredicted RBP6.4□□□□□ -1.38
UBE2N-204ENST00000549833 HOMER3Q9NSC5 361 aa6.4□□□□□ -1.38
UBE2N-204ENST00000549833 HAUS2Q9NVX0 235 aa6.4□□□□□ -1.38
UBE2N-204ENST00000549833 SCML1Q9UN30 329 aa6.4□□□□□ -1.38
UBE2N-204ENST00000549833 DRG1Q9Y295 367 aaKnown RBP6.4□□□□□ -1.38
UBE2N-204ENST00000549833 PCDHB1Q9Y5F3 818 aa6.4□□□□□ -1.38
UBE2N-204ENST00000549833 FADS3Q9Y5Q0 445 aa6.4□□□□□ -1.38
UBE2N-204ENST00000549833 DMDP11532 3685 aa6.4□□□□□ -1.39
UBE2N-204ENST00000549833 KIF26BQ2KJY2 2108 aa6.4□□□□□ -1.39
UBE2N-204ENST00000549833 USP34Q70CQ2 3546 aa6.39□□□□□ -1.39
UBE2N-204ENST00000549833 MYO15AQ9UKN7 3530 aa6.39□□□□□ -1.39
UBE2N-204ENST00000549833 TBC1D3DA0A087WVF3 549 aa6.39□□□□□ -1.39
UBE2N-204ENST00000549833 TBC1D3IA0A087WXS9 549 aa6.39□□□□□ -1.39
UBE2N-204ENST00000549833 TBC1D3EA0A087X179 549 aa6.39□□□□□ -1.39
UBE2N-204ENST00000549833 TBC1D3KA0A087X1G2 549 aa6.39□□□□□ -1.39
UBE2N-204ENST00000549833 GOLGA6L10A0A0M3HER8 536 aa6.39□□□□□ -1.39
UBE2N-204ENST00000549833 A0A0U1RQS6 177 aa6.39□□□□□ -1.39
UBE2N-204ENST00000549833 CCDC189A1A4V9 331 aa6.39□□□□□ -1.39
UBE2N-204ENST00000549833 TBC1D3FA6NER0 549 aaPredicted RBP6.39□□□□□ -1.39
UBE2N-204ENST00000549833 A8MX80 341 aa6.39□□□□□ -1.39
UBE2N-204ENST00000549833 TBC1D3LB9A6J9 549 aa6.39□□□□□ -1.39
UBE2N-204ENST00000549833 NPIPB8E9PQR5 432 aa6.39□□□□□ -1.39
UBE2N-204ENST00000549833 KIF2AO00139 706 aaPredicted RBP6.39□□□□□ -1.39
UBE2N-204ENST00000549833 SLC16A6O15403 523 aa6.39□□□□□ -1.39
UBE2N-204ENST00000549833 SLC7A4O43246 635 aa6.39□□□□□ -1.39
UBE2N-204ENST00000549833 PLRG1O43660 514 aaKnown RBP6.39□□□□□ -1.39
UBE2N-204ENST00000549833 SOCS5O75159 536 aa6.39□□□□□ -1.39
UBE2N-204ENST00000549833 METTL18O95568 372 aa6.39□□□□□ -1.39
UBE2N-204ENST00000549833 ALPIP09923 528 aa6.39□□□□□ -1.39
UBE2N-204ENST00000549833 TBC1D3HP0C7X1 549 aa6.39□□□□□ -1.39
UBE2N-204ENST00000549833 PIRTP0C851 137 aa6.39□□□□□ -1.39
UBE2N-204ENST00000549833 OXTRP30559 389 aa6.39□□□□□ -1.39
UBE2N-204ENST00000549833 STIP1P31948 543 aaKnown RBP6.39□□□□□ -1.39
UBE2N-204ENST00000549833 RPL22P35268 128 aaKnown RBP6.39□□□□□ -1.39
UBE2N-204ENST00000549833 PAFAH1B1P43034 410 aa6.39□□□□□ -1.39
UBE2N-204ENST00000549833 VPS41P49754 854 aa6.39□□□□□ -1.39
UBE2N-204ENST00000549833 TERF1P54274 439 aa6.39□□□□□ -1.39
UBE2N-204ENST00000549833 GEMP55040 296 aa6.39□□□□□ -1.39
UBE2N-204ENST00000549833 RAB1AP62820 205 aa6.39□□□□□ -1.39
UBE2N-204ENST00000549833 MRPS25P82663 173 aaKnown RBP6.39□□□□□ -1.39
UBE2N-204ENST00000549833 C2orf54Q08AI8 447 aa6.39□□□□□ -1.39
UBE2N-204ENST00000549833 ABHD18Q0P651 414 aa6.39□□□□□ -1.39
UBE2N-204ENST00000549833 SIM2Q14190 667 aaPredicted RBP6.39□□□□□ -1.39
UBE2N-204ENST00000549833 GALNT3Q14435 633 aa6.39□□□□□ -1.39
UBE2N-204ENST00000549833 SPARCL1Q14515 664 aa6.39□□□□□ -1.39
UBE2N-204ENST00000549833 UGP2Q16851 508 aa6.39□□□□□ -1.39
UBE2N-204ENST00000549833 P3H1Q32P28 736 aa6.39□□□□□ -1.39
UBE2N-204ENST00000549833 PLK5Q496M5 336 aa6.39□□□□□ -1.39
UBE2N-204ENST00000549833 ARMC12Q5T9G4 340 aa6.39□□□□□ -1.39
UBE2N-204ENST00000549833 TBC1D3GQ6DHY5 549 aa6.39□□□□□ -1.39
UBE2N-204ENST00000549833 TBC1D3CQ6IPX1 549 aa6.39□□□□□ -1.39
UBE2N-204ENST00000549833 BRAT1Q6PJG6 821 aa6.39□□□□□ -1.39
UBE2N-204ENST00000549833 CCDC137Q6PK04 289 aaKnown RBP6.39□□□□□ -1.39
UBE2N-204ENST00000549833 SLC36A4Q6YBV0 504 aa6.39□□□□□ -1.39
UBE2N-204ENST00000549833 KLHL7Q8IXQ5 586 aa6.39□□□□□ -1.39
UBE2N-204ENST00000549833 TBC1D3Q8IZP1 549 aaPredicted RBP6.39□□□□□ -1.39
UBE2N-204ENST00000549833 CCDC89Q8N998 374 aa6.39□□□□□ -1.39
UBE2N-204ENST00000549833 IPMKQ8NFU5 416 aa6.39□□□□□ -1.39
UBE2N-204ENST00000549833 IFI44Q8TCB0 444 aa6.39□□□□□ -1.39
UBE2N-204ENST00000549833 PIH1D2Q8WWB5 315 aa6.39□□□□□ -1.39
UBE2N-204ENST00000549833 KLK6Q92876 244 aa6.39□□□□□ -1.39
UBE2N-204ENST00000549833 FAM131CQ96AQ9 280 aa6.39□□□□□ -1.39
UBE2N-204ENST00000549833 FCRL5Q96RD9 977 aa6.39□□□□□ -1.39
UBE2N-204ENST00000549833 APOL2Q9BQE5 337 aa6.39□□□□□ -1.39
UBE2N-204ENST00000549833 WRAP53Q9BUR4 548 aaKnown RBP6.39□□□□□ -1.39
UBE2N-204ENST00000549833 FICDQ9BVA6 458 aa6.39□□□□□ -1.39
Retrieved 100 of 20,778 RNA–protein pairs in 41.7 ms