RNA–Protein interactions for RNA: ENST00000549162.5

SCAF11-212, Transcript of SR-related CTD associated factor 11, humanhuman

TSL 1 (best) BASIC

Gene SCAF11, Length 3,934 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCAF11-212ENST00000549162 CCKBRP32239 447 aa4.76□□□□□ -1.65
SCAF11-212ENST00000549162 HNF4AP41235 474 aa4.76□□□□□ -1.65
SCAF11-212ENST00000549162 TSPAN7P41732 249 aa4.76□□□□□ -1.65
SCAF11-212ENST00000549162 ZNF133P52736 654 aaPredicted RBP4.76□□□□□ -1.65
SCAF11-212ENST00000549162 NXPH1P58417 271 aa4.76□□□□□ -1.65
SCAF11-212ENST00000549162 EEF1A2Q05639 463 aaKnown RBP4.76□□□□□ -1.65
SCAF11-212ENST00000549162 MAD2L1Q13257 205 aaPredicted RBP4.76□□□□□ -1.65
SCAF11-212ENST00000549162 ZNF234Q14588 700 aa4.76□□□□□ -1.65
SCAF11-212ENST00000549162 INPP5AQ14642 412 aa4.76□□□□□ -1.65
SCAF11-212ENST00000549162 SLC9A5Q14940 896 aa4.76□□□□□ -1.65
SCAF11-212ENST00000549162 LINC00299Q6ZSB3 139 aa4.76□□□□□ -1.65
SCAF11-212ENST00000549162 PARS2Q7L3T8 475 aaKnown RBP4.76□□□□□ -1.65
SCAF11-212ENST00000549162 C12orf40Q86WS4 652 aa4.76□□□□□ -1.65
SCAF11-212ENST00000549162 ZFAND4Q86XD8 727 aa4.76□□□□□ -1.65
SCAF11-212ENST00000549162 ACSF2Q96CM8 615 aaPredicted RBP4.76□□□□□ -1.65
SCAF11-212ENST00000549162 UIMC1Q96RL1 719 aa4.76□□□□□ -1.65
SCAF11-212ENST00000549162 DHX35Q9H5Z1 703 aaKnown RBP4.76□□□□□ -1.65
SCAF11-212ENST00000549162 IL26Q9NPH9 171 aa4.76□□□□□ -1.65
SCAF11-212ENST00000549162 MRPL40Q9NQ50 206 aaKnown RBP4.76□□□□□ -1.65
SCAF11-212ENST00000549162 CATSPERZQ9NTU4 200 aa4.76□□□□□ -1.65
SCAF11-212ENST00000549162 MBD1Q9UIS9 605 aaPredicted RBP4.76□□□□□ -1.65
SCAF11-212ENST00000549162 POLHQ9Y253 713 aa4.76□□□□□ -1.65
SCAF11-212ENST00000549162 IGHV1OR15-9A0A0B4J2B8 117 aa4.76□□□□□ -1.65
SCAF11-212ENST00000549162 TRBC2A0A5B9 178 aa4.76□□□□□ -1.65
SCAF11-212ENST00000549162 TMX2-CTNND1H3BSU7 103 aa4.76□□□□□ -1.65
SCAF11-212ENST00000549162 J3KR12 359 aa4.76□□□□□ -1.65
SCAF11-212ENST00000549162 TM4SF5O14894 197 aa4.76□□□□□ -1.65
SCAF11-212ENST00000549162 KMOO15229 486 aa4.76□□□□□ -1.65
SCAF11-212ENST00000549162 DLX3O60479 287 aa4.76□□□□□ -1.65
SCAF11-212ENST00000549162 CLEC3AO75596 197 aa4.76□□□□□ -1.65
SCAF11-212ENST00000549162 B3GALT4O96024 378 aa4.76□□□□□ -1.65
SCAF11-212ENST00000549162 CSF2P04141 144 aa4.76□□□□□ -1.65
SCAF11-212ENST00000549162 PCNAP12004 261 aa4.76□□□□□ -1.65
SCAF11-212ENST00000549162 CPB1P15086 417 aa4.76□□□□□ -1.65
SCAF11-212ENST00000549162 HNF1BP35680 557 aa4.76□□□□□ -1.65
SCAF11-212ENST00000549162 CPOXP36551 454 aa4.76□□□□□ -1.65
SCAF11-212ENST00000549162 RGRP47804 291 aa4.76□□□□□ -1.65
SCAF11-212ENST00000549162 ADPRHP54922 357 aa4.76□□□□□ -1.65
SCAF11-212ENST00000549162 EMX2Q04743 252 aa4.76□□□□□ -1.65
SCAF11-212ENST00000549162 GPS1Q13098 491 aa4.76□□□□□ -1.65
SCAF11-212ENST00000549162 TRAF3Q13114 568 aa4.76□□□□□ -1.65
SCAF11-212ENST00000549162 LRRC14Q15048 493 aa4.76□□□□□ -1.65
SCAF11-212ENST00000549162 SHBQ15464 509 aa4.76□□□□□ -1.65
SCAF11-212ENST00000549162 CCSMST1Q4G0I0 132 aa4.76□□□□□ -1.65
SCAF11-212ENST00000549162 SLC25A53Q5H9E4 307 aa4.76□□□□□ -1.65
SCAF11-212ENST00000549162 TOR1AIP1Q5JTV8 583 aa4.76□□□□□ -1.65
SCAF11-212ENST00000549162 TAF3Q5VWG9 929 aa4.76□□□□□ -1.65
SCAF11-212ENST00000549162 PMS2CLQ68D20 193 aa4.76□□□□□ -1.65
SCAF11-212ENST00000549162 SLC2A7Q6PXP3 512 aa4.76□□□□□ -1.65
SCAF11-212ENST00000549162 MAEAQ7L5Y9 396 aa4.76□□□□□ -1.65
SCAF11-212ENST00000549162 PHLDB2Q86SQ0 1253 aa4.76□□□□□ -1.65
SCAF11-212ENST00000549162 FAM26EQ8N5C1 309 aa4.76□□□□□ -1.65
SCAF11-212ENST00000549162 PACRGLQ8N7B6 248 aa4.76□□□□□ -1.65
SCAF11-212ENST00000549162 ITFG1Q8TB96 612 aa4.76□□□□□ -1.65
SCAF11-212ENST00000549162 NSMCE1Q8WV22 266 aa4.76□□□□□ -1.65
SCAF11-212ENST00000549162 GLYATL1Q969I3 302 aa4.76□□□□□ -1.65
SCAF11-212ENST00000549162 MARK4Q96L34 752 aa4.76□□□□□ -1.65
SCAF11-212ENST00000549162 TMEM121Q9BTD3 319 aa4.76□□□□□ -1.65
SCAF11-212ENST00000549162 PINK1Q9BXM7 581 aa4.76□□□□□ -1.65
SCAF11-212ENST00000549162 TMEM38AQ9H6F2 299 aa4.76□□□□□ -1.65
SCAF11-212ENST00000549162 DDX31Q9H8H2 851 aaKnown RBP4.76□□□□□ -1.65
SCAF11-212ENST00000549162 SIDT1Q9NXL6 827 aaKnown RBP4.76□□□□□ -1.65
SCAF11-212ENST00000549162 NLGN3Q9NZ94 848 aa4.76□□□□□ -1.65
SCAF11-212ENST00000549162 SAMD15Q9P1V8 674 aa4.76□□□□□ -1.65
SCAF11-212ENST00000549162 PADI4Q9UM07 663 aa4.76□□□□□ -1.65
SCAF11-212ENST00000549162 SLC22A7Q9Y694 548 aa4.76□□□□□ -1.65
SCAF11-212ENST00000549162 MGAT4DA6NG13 374 aa4.75□□□□□ -1.65
SCAF11-212ENST00000549162 CD3EAPO15446 510 aaKnown RBP4.75□□□□□ -1.65
SCAF11-212ENST00000549162 FOXS1O43638 330 aa4.75□□□□□ -1.65
SCAF11-212ENST00000549162 TBL1XO60907 577 aa4.75□□□□□ -1.65
SCAF11-212ENST00000549162 ZFAND5O76080 213 aa4.75□□□□□ -1.65
SCAF11-212ENST00000549162 AHSGP02765 367 aa4.75□□□□□ -1.65
SCAF11-212ENST00000549162 MYZAPP0CAP1 466 aa4.75□□□□□ -1.65
SCAF11-212ENST00000549162 PKMP14618 531 aaKnown RBP4.75□□□□□ -1.65
SCAF11-212ENST00000549162 ITGB6P18564 788 aa4.75□□□□□ -1.65
SCAF11-212ENST00000549162 KELP23276 732 aa4.75□□□□□ -1.65
SCAF11-212ENST00000549162 ELF1P32519 619 aa4.75□□□□□ -1.65
SCAF11-212ENST00000549162 SLC1A2P43004 574 aa4.75□□□□□ -1.65
SCAF11-212ENST00000549162 TBL3Q12788 808 aaKnown RBP4.75□□□□□ -1.65
SCAF11-212ENST00000549162 PRKAA1Q13131 559 aa4.75□□□□□ -1.65
SCAF11-212ENST00000549162 C10orf120Q5SQS8 335 aa4.75□□□□□ -1.65
SCAF11-212ENST00000549162 FHL5Q5TD97 284 aa4.75□□□□□ -1.65
SCAF11-212ENST00000549162 ZNF697Q5TEC3 545 aa4.75□□□□□ -1.65
SCAF11-212ENST00000549162 ATG16L1Q676U5 607 aa4.75□□□□□ -1.65
SCAF11-212ENST00000549162 HEPHL1Q6MZM0 1159 aa4.75□□□□□ -1.65
SCAF11-212ENST00000549162 UBE2R2Q712K3 238 aaPredicted RBP4.75□□□□□ -1.65
SCAF11-212ENST00000549162 CHDHQ8NE62 594 aaPredicted RBP4.75□□□□□ -1.65
SCAF11-212ENST00000549162 FAM71CQ8NEG0 241 aa4.75□□□□□ -1.65
SCAF11-212ENST00000549162 NCSTNQ92542 709 aa4.75□□□□□ -1.65
SCAF11-212ENST00000549162 NRBF2Q96F24 287 aa4.75□□□□□ -1.65
SCAF11-212ENST00000549162 CMTM7Q96FZ5 175 aa4.75□□□□□ -1.65
SCAF11-212ENST00000549162 PLPPR2Q96GM1 343 aa4.75□□□□□ -1.65
SCAF11-212ENST00000549162 HIC2Q96JB3 615 aa4.75□□□□□ -1.65
SCAF11-212ENST00000549162 FAM84AQ96KN4 292 aa4.75□□□□□ -1.65
SCAF11-212ENST00000549162 ZNF778Q96MU6 729 aa4.75□□□□□ -1.65
SCAF11-212ENST00000549162 ZPBPQ9BS86 351 aa4.75□□□□□ -1.65
SCAF11-212ENST00000549162 TRMT61BQ9BVS5 477 aaKnown RBP4.75□□□□□ -1.65
SCAF11-212ENST00000549162 SEMA4CQ9C0C4 833 aa4.75□□□□□ -1.65
SCAF11-212ENST00000549162 CLEC4MQ9H2X3 399 aaPredicted RBP4.75□□□□□ -1.65
SCAF11-212ENST00000549162 CYP4F11Q9HBI6 524 aa4.75□□□□□ -1.65
Retrieved 100 of 20,778 RNA–protein pairs in 43.7 ms