RNA–Protein interactions for RNA: ENST00000548825.6

PRPF40B-209, Transcript of pre-mRNA processing factor 40 homolog B, humanhuman

APPRIS P2 TSL 5 BASIC

Gene PRPF40B, Length 3,307 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PRPF40B-209ENST00000548825 IRF5Q13568 498 aa13.36□□□□□ -0.27
PRPF40B-209ENST00000548825 ATP6AP1Q15904 470 aa13.36□□□□□ -0.27
PRPF40B-209ENST00000548825 CES5AQ6NT32 575 aa13.36□□□□□ -0.27
PRPF40B-209ENST00000548825 SYT12Q8IV01 421 aa13.36□□□□□ -0.27
PRPF40B-209ENST00000548825 ATG16L2Q8NAA4 619 aa13.36□□□□□ -0.27
PRPF40B-209ENST00000548825 TADA1Q96BN2 335 aa13.36□□□□□ -0.27
PRPF40B-209ENST00000548825 ZNF583Q96ND8 569 aa13.36□□□□□ -0.27
PRPF40B-209ENST00000548825 CDK5RAP1Q96SZ6 601 aaKnown RBP13.36□□□□□ -0.27
PRPF40B-209ENST00000548825 WRAP53Q9BUR4 548 aaKnown RBP13.36□□□□□ -0.27
PRPF40B-209ENST00000548825 NUSAP1Q9BXS6 441 aaKnown RBP13.36□□□□□ -0.27
PRPF40B-209ENST00000548825 CD244Q9BZW8 370 aa13.36□□□□□ -0.27
PRPF40B-209ENST00000548825 POPDC3Q9HBV1 291 aa13.36□□□□□ -0.27
PRPF40B-209ENST00000548825 GPBP1L1Q9HC44 474 aaPredicted RBP13.36□□□□□ -0.27
PRPF40B-209ENST00000548825 EYSQ5T1H1 3165 aa13.36□□□□□ -0.27
PRPF40B-209ENST00000548825 TEX28O15482 410 aa13.35□□□□□ -0.27
PRPF40B-209ENST00000548825 ZDHHC11BP0C7U3 371 aa13.35□□□□□ -0.27
PRPF40B-209ENST00000548825 TNFRSF1BP20333 461 aa13.35□□□□□ -0.27
PRPF40B-209ENST00000548825 MEF2AQ02078 507 aaPredicted RBP13.35□□□□□ -0.27
PRPF40B-209ENST00000548825 FPGSQ05932 587 aa13.35□□□□□ -0.27
PRPF40B-209ENST00000548825 CHIT1Q13231 466 aa13.35□□□□□ -0.27
PRPF40B-209ENST00000548825 KCNAB2Q13303 367 aa13.35□□□□□ -0.27
PRPF40B-209ENST00000548825 XKR7Q5GH72 579 aa13.35□□□□□ -0.27
PRPF40B-209ENST00000548825 XKR6Q5GH73 641 aa13.35□□□□□ -0.27
PRPF40B-209ENST00000548825 FAM26DQ5JW98 314 aa13.35□□□□□ -0.27
PRPF40B-209ENST00000548825 HACD2Q6Y1H2 254 aa13.35□□□□□ -0.27
PRPF40B-209ENST00000548825 TMEM126BQ8IUX1 230 aa13.35□□□□□ -0.27
PRPF40B-209ENST00000548825 C8orf59Q8N0T1 100 aaPredicted RBP13.35□□□□□ -0.27
PRPF40B-209ENST00000548825 FAM81AQ8TBF8 368 aa13.35□□□□□ -0.27
PRPF40B-209ENST00000548825 RNF217Q8TC41 542 aa13.35□□□□□ -0.27
PRPF40B-209ENST00000548825 KLF16Q9BXK1 252 aaPredicted RBP13.35□□□□□ -0.27
PRPF40B-209ENST00000548825 SEZ6LQ9BYH1 1024 aa13.35□□□□□ -0.27
PRPF40B-209ENST00000548825 MTRRQ9UBK8 725 aa13.35□□□□□ -0.27
PRPF40B-209ENST00000548825 MAGEL2Q9UJ55 1249 aa13.35□□□□□ -0.27
PRPF40B-209ENST00000548825 SNX5Q9Y5X3 404 aa13.35□□□□□ -0.27
PRPF40B-209ENST00000548825 MANBAO00462 879 aa13.35□□□□□ -0.27
PRPF40B-209ENST00000548825 SCAMP1O15126 338 aa13.35□□□□□ -0.27
PRPF40B-209ENST00000548825 RFPL2O75678 378 aa13.35□□□□□ -0.27
PRPF40B-209ENST00000548825 CLDN9O95484 217 aa13.35□□□□□ -0.27
PRPF40B-209ENST00000548825 CCR7P32248 378 aa13.35□□□□□ -0.27
PRPF40B-209ENST00000548825 NAA20P61599 178 aa13.35□□□□□ -0.27
PRPF40B-209ENST00000548825 NAE1Q13564 534 aa13.35□□□□□ -0.27
PRPF40B-209ENST00000548825 PWP1Q13610 501 aa13.35□□□□□ -0.27
PRPF40B-209ENST00000548825 MAPK11Q15759 364 aa13.35□□□□□ -0.27
PRPF40B-209ENST00000548825 SLC36A3Q495N2 470 aa13.35□□□□□ -0.27
PRPF40B-209ENST00000548825 SYTL3Q4VX76 610 aa13.35□□□□□ -0.27
PRPF40B-209ENST00000548825 PABPC1LQ4VXU2 614 aaKnown RBP13.35□□□□□ -0.27
PRPF40B-209ENST00000548825 PERM1Q5SV97 790 aa13.35□□□□□ -0.27
PRPF40B-209ENST00000548825 TMEM25Q86YD3 366 aa13.35□□□□□ -0.27
PRPF40B-209ENST00000548825 CLECL1Q8IZS7 167 aa13.35□□□□□ -0.27
PRPF40B-209ENST00000548825 MAL2Q969L2 176 aa13.35□□□□□ -0.27
PRPF40B-209ENST00000548825 IL37Q9NZH6 218 aa13.35□□□□□ -0.27
PRPF40B-209ENST00000548825 ZIM2Q9NZV7 527 aa13.35□□□□□ -0.27
PRPF40B-209ENST00000548825 INSL5Q9Y5Q6 135 aa13.35□□□□□ -0.27
PRPF40B-209ENST00000548825 NRG2O14511 850 aaPredicted RBP13.34□□□□□ -0.27
PRPF40B-209ENST00000548825 PER2O15055 1255 aa13.34□□□□□ -0.27
PRPF40B-209ENST00000548825 CAPN15O75808 1086 aa13.34□□□□□ -0.27
PRPF40B-209ENST00000548825 COX7A2P14406 83 aa13.34□□□□□ -0.27
PRPF40B-209ENST00000548825 PSMB9P28065 219 aa13.34□□□□□ -0.27
PRPF40B-209ENST00000548825 CDK9P50750 372 aaKnown RBP13.34□□□□□ -0.27
PRPF40B-209ENST00000548825 RPS14P62263 151 aaKnown RBP13.34□□□□□ -0.27
PRPF40B-209ENST00000548825 DAG1Q14118 895 aa13.34□□□□□ -0.27
PRPF40B-209ENST00000548825 IER5LQ5T953 404 aa13.34□□□□□ -0.27
PRPF40B-209ENST00000548825 LHX8Q68G74 356 aa13.34□□□□□ -0.27
PRPF40B-209ENST00000548825 CRTC1Q6UUV9 634 aa13.34□□□□□ -0.27
PRPF40B-209ENST00000548825 PIWIL3Q7Z3Z3 882 aaKnown RBP13.34□□□□□ -0.27
PRPF40B-209ENST00000548825 C11orf74Q86VG3 221 aa13.34□□□□□ -0.27
PRPF40B-209ENST00000548825 GAB3Q8WWW8 586 aa13.34□□□□□ -0.27
PRPF40B-209ENST00000548825 RHBDF1Q96CC6 855 aa13.34□□□□□ -0.27
PRPF40B-209ENST00000548825 ACPTQ9BZG2 426 aa13.34□□□□□ -0.27
PRPF40B-209ENST00000548825 ROGDIQ9GZN7 287 aa13.34□□□□□ -0.27
PRPF40B-209ENST00000548825 LINC00597Q9H2U6 94 aa13.34□□□□□ -0.27
PRPF40B-209ENST00000548825 EPS8L2Q9H6S3 715 aa13.34□□□□□ -0.27
PRPF40B-209ENST00000548825 C1orf109Q9NX04 203 aa13.34□□□□□ -0.27
PRPF40B-209ENST00000548825 HSFX1Q9UBD0 423 aa13.34□□□□□ -0.27
PRPF40B-209ENST00000548825 B4GALT6Q9UBX8 382 aa13.34□□□□□ -0.27
PRPF40B-209ENST00000548825 PRKAB1Q9Y478 270 aa13.34□□□□□ -0.27
PRPF40B-209ENST00000548825 PCDHGA8Q9Y5G5 932 aa13.34□□□□□ -0.27
PRPF40B-209ENST00000548825 VWA8A3KMH1 1905 aa13.34□□□□□ -0.27
PRPF40B-209ENST00000548825 RAP2AP10114 183 aa13.34□□□□□ -0.27
PRPF40B-209ENST00000548825 MATN1P21941 496 aa13.34□□□□□ -0.27
PRPF40B-209ENST00000548825 ACRV1P26436 265 aa13.34□□□□□ -0.27
PRPF40B-209ENST00000548825 EEFSECP57772 596 aaKnown RBP13.34□□□□□ -0.27
PRPF40B-209ENST00000548825 ITGADQ13349 1161 aa13.34□□□□□ -0.27
PRPF40B-209ENST00000548825 ADRM1Q16186 407 aa13.34□□□□□ -0.27
PRPF40B-209ENST00000548825 PLEKHG6Q3KR16 790 aa13.34□□□□□ -0.27
PRPF40B-209ENST00000548825 PDCD4Q53EL6 469 aaKnown RBP13.34□□□□□ -0.27
PRPF40B-209ENST00000548825 KLHL35Q6PF15 583 aa13.34□□□□□ -0.27
PRPF40B-209ENST00000548825 PATL1Q86TB9 770 aaKnown RBP13.34□□□□□ -0.27
PRPF40B-209ENST00000548825 GPR180Q86V85 440 aa13.34□□□□□ -0.27
PRPF40B-209ENST00000548825 NXPE1Q8N323 547 aa13.34□□□□□ -0.27
PRPF40B-209ENST00000548825 GTF2H4Q92759 462 aa13.34□□□□□ -0.27
PRPF40B-209ENST00000548825 UBE2FQ969M7 185 aa13.34□□□□□ -0.27
PRPF40B-209ENST00000548825 ZNF558Q96NG5 402 aa13.34□□□□□ -0.27
PRPF40B-209ENST00000548825 BARD1Q99728 777 aaKnown RBP13.34□□□□□ -0.27
PRPF40B-209ENST00000548825 RHNO1Q9BSD3 238 aa13.34□□□□□ -0.27
PRPF40B-209ENST00000548825 NPLQ9BXD5 320 aaPredicted RBP13.34□□□□□ -0.27
PRPF40B-209ENST00000548825 SLC25A37Q9NYZ2 338 aa13.34□□□□□ -0.27
PRPF40B-209ENST00000548825 RAPGEFL1Q9UHV5 662 aa13.34□□□□□ -0.27
PRPF40B-209ENST00000548825 ITM2BQ9Y287 266 aa13.34□□□□□ -0.27
PRPF40B-209ENST00000548825 PCDHB3Q9Y5E6 796 aa13.34□□□□□ -0.27
Retrieved 100 of 20,778 RNA–protein pairs in 58.1 ms