RNA–Protein interactions for RNA: ENST00000548263.5

CALCOCO1-210, Transcript of calcium binding and coiled-coil domain 1, humanhuman

TSL 1 (best) BASIC

Gene CALCOCO1, Length 3,888 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CALCOCO1-210ENST00000548263 PTGER3P43115 390 aa9.3□□□□□ -0.92
CALCOCO1-210ENST00000548263 ELP6Q0PNE2 266 aa9.3□□□□□ -0.92
CALCOCO1-210ENST00000548263 TAF1AQ15573 450 aaPredicted RBP9.3□□□□□ -0.92
CALCOCO1-210ENST00000548263 SPATS1Q496A3 300 aa9.3□□□□□ -0.92
CALCOCO1-210ENST00000548263 EPHX4Q8IUS5 362 aa9.3□□□□□ -0.92
CALCOCO1-210ENST00000548263 RBFAQ8N0V3 343 aa9.3□□□□□ -0.92
CALCOCO1-210ENST00000548263 GLB1L3Q8NCI6 653 aaPredicted RBP9.3□□□□□ -0.92
CALCOCO1-210ENST00000548263 PGAP3Q96FM1 320 aaPredicted RBP9.3□□□□□ -0.92
CALCOCO1-210ENST00000548263 FOPNLQ96NB1 174 aa9.3□□□□□ -0.92
CALCOCO1-210ENST00000548263 EBPLQ9BY08 206 aa9.3□□□□□ -0.92
CALCOCO1-210ENST00000548263 KATNBL1Q9H079 304 aa9.3□□□□□ -0.92
CALCOCO1-210ENST00000548263 CACYBPQ9HB71 228 aaKnown RBP9.3□□□□□ -0.92
CALCOCO1-210ENST00000548263 WBP11Q9Y2W2 641 aaKnown RBP9.3□□□□□ -0.92
CALCOCO1-210ENST00000548263 SAGE2PA6NJ88 616 aa9.3□□□□□ -0.92
CALCOCO1-210ENST00000548263 FPGTO14772 594 aa9.3□□□□□ -0.92
CALCOCO1-210ENST00000548263 MITFO75030 526 aaPredicted RBP9.3□□□□□ -0.92
CALCOCO1-210ENST00000548263 PRAMEF1O95521 474 aa9.3□□□□□ -0.92
CALCOCO1-210ENST00000548263 CTSKP43235 329 aa9.3□□□□□ -0.92
CALCOCO1-210ENST00000548263 SPIBQ01892 262 aa9.3□□□□□ -0.92
CALCOCO1-210ENST00000548263 OTUD1Q5VV17 481 aaPredicted RBP9.3□□□□□ -0.92
CALCOCO1-210ENST00000548263 KIAA0319Q5VV43 1072 aa9.3□□□□□ -0.92
CALCOCO1-210ENST00000548263 OR2T5Q6IEZ7 315 aa9.3□□□□□ -0.92
CALCOCO1-210ENST00000548263 RETSATQ6NUM9 610 aa9.3□□□□□ -0.92
CALCOCO1-210ENST00000548263 KDELC1Q6UW63 502 aa9.3□□□□□ -0.92
CALCOCO1-210ENST00000548263 GOLGA7Q7Z5G4 137 aa9.3□□□□□ -0.92
CALCOCO1-210ENST00000548263 SERPINA9Q86WD7 417 aa9.3□□□□□ -0.92
CALCOCO1-210ENST00000548263 KRTCAP2Q8N6L1 136 aa9.3□□□□□ -0.92
CALCOCO1-210ENST00000548263 SREK1IP1Q8N9Q2 155 aaPredicted RBP9.3□□□□□ -0.92
CALCOCO1-210ENST00000548263 OR2T29Q8NH02 315 aa9.3□□□□□ -0.92
CALCOCO1-210ENST00000548263 ZFP90Q8TF47 636 aa9.3□□□□□ -0.92
CALCOCO1-210ENST00000548263 ZNF296Q8WUU4 475 aaPredicted RBP9.3□□□□□ -0.92
CALCOCO1-210ENST00000548263 LGALS12Q96DT0 336 aa9.3□□□□□ -0.92
CALCOCO1-210ENST00000548263 SH3YL1Q96HL8 342 aaPredicted RBP9.3□□□□□ -0.92
CALCOCO1-210ENST00000548263 DMRTB1Q96MA1 342 aa9.3□□□□□ -0.92
CALCOCO1-210ENST00000548263 GPR62Q9BZJ7 368 aa9.3□□□□□ -0.92
CALCOCO1-210ENST00000548263 ATG10Q9H0Y0 220 aa9.3□□□□□ -0.92
CALCOCO1-210ENST00000548263 DYRK4Q9NR20 520 aa9.3□□□□□ -0.92
CALCOCO1-210ENST00000548263 DNMT3LQ9UJW3 386 aa9.3□□□□□ -0.92
CALCOCO1-210ENST00000548263 OAS3Q9Y6K5 1087 aaKnown RBP9.3□□□□□ -0.92
CALCOCO1-210ENST00000548263 ZFP37Q9Y6Q3 630 aaPredicted RBP9.3□□□□□ -0.92
CALCOCO1-210ENST00000548263 COL11A1P12107 1806 aaPredicted RBP9.29□□□□□ -0.92
CALCOCO1-210ENST00000548263 A0A1W2PQ45 241 aaPredicted RBP9.29□□□□□ -0.92
CALCOCO1-210ENST00000548263 A0A1W2PQY0 241 aa9.29□□□□□ -0.92
CALCOCO1-210ENST00000548263 MBLAC1A4D2B0 266 aaPredicted RBP9.29□□□□□ -0.92
CALCOCO1-210ENST00000548263 HTR3EA5X5Y0 456 aa9.29□□□□□ -0.92
CALCOCO1-210ENST00000548263 TARM1B6A8C7 271 aa9.29□□□□□ -0.92
CALCOCO1-210ENST00000548263 STX16O14662 325 aa9.29□□□□□ -0.92
CALCOCO1-210ENST00000548263 FKTNO75072 461 aa9.29□□□□□ -0.92
CALCOCO1-210ENST00000548263 TSC22D2O75157 780 aa9.29□□□□□ -0.92
CALCOCO1-210ENST00000548263 CLDN9O95484 217 aa9.29□□□□□ -0.92
CALCOCO1-210ENST00000548263 NPPAP01160 153 aa9.29□□□□□ -0.92
CALCOCO1-210ENST00000548263 MT-ND2P03891 347 aa9.29□□□□□ -0.92
CALCOCO1-210ENST00000548263 FAM163BP0C2L3 166 aa9.29□□□□□ -0.92
CALCOCO1-210ENST00000548263 CYBAP13498 195 aa9.29□□□□□ -0.92
CALCOCO1-210ENST00000548263 POLR2IP36954 125 aaKnown RBP9.29□□□□□ -0.92
CALCOCO1-210ENST00000548263 NKX2-5P52952 324 aaPredicted RBP9.29□□□□□ -0.92
CALCOCO1-210ENST00000548263 CASP9P55211 416 aa9.29□□□□□ -0.92
CALCOCO1-210ENST00000548263 TLE2Q04725 743 aa9.29□□□□□ -0.92
CALCOCO1-210ENST00000548263 SEMA3BQ13214 749 aa9.29□□□□□ -0.92
CALCOCO1-210ENST00000548263 RCAN2Q14206 197 aa9.29□□□□□ -0.92
CALCOCO1-210ENST00000548263 SPCS2Q15005 226 aa9.29□□□□□ -0.92
CALCOCO1-210ENST00000548263 PLEKHG6Q3KR16 790 aa9.29□□□□□ -0.92
CALCOCO1-210ENST00000548263 COQ5Q5HYK3 327 aa9.29□□□□□ -0.92
CALCOCO1-210ENST00000548263 PIK3R6Q5UE93 754 aa9.29□□□□□ -0.92
CALCOCO1-210ENST00000548263 TYW3Q6IPR3 259 aaKnown RBP9.29□□□□□ -0.92
CALCOCO1-210ENST00000548263 TBPL2Q6SJ96 375 aa9.29□□□□□ -0.92
CALCOCO1-210ENST00000548263 ZFAND4Q86XD8 727 aa9.29□□□□□ -0.92
CALCOCO1-210ENST00000548263 IGSF8Q969P0 613 aa9.29□□□□□ -0.92
CALCOCO1-210ENST00000548263 PYCR2Q96C36 320 aa9.29□□□□□ -0.92
CALCOCO1-210ENST00000548263 MYOCQ99972 504 aa9.29□□□□□ -0.92
CALCOCO1-210ENST00000548263 CCSER2Q9H7U1 834 aa9.29□□□□□ -0.92
CALCOCO1-210ENST00000548263 AASDHPPTQ9NRN7 309 aa9.29□□□□□ -0.92
CALCOCO1-210ENST00000548263 WDR70Q9NW82 654 aa9.29□□□□□ -0.92
CALCOCO1-210ENST00000548263 ARIH1Q9Y4X5 557 aaPredicted RBP9.29□□□□□ -0.92
CALCOCO1-210ENST00000548263 LAMA2P24043 3122 aaKnown RBP9.29□□□□□ -0.92
CALCOCO1-210ENST00000548263 SCN1AP35498 2009 aa9.29□□□□□ -0.92
CALCOCO1-210ENST00000548263 SHROOM3Q8TF72 1996 aa9.29□□□□□ -0.92
CALCOCO1-210ENST00000548263 A0A0D9SEW6 157 aa9.29□□□□□ -0.92
CALCOCO1-210ENST00000548263 SERPIND1P05546 499 aa9.29□□□□□ -0.92
CALCOCO1-210ENST00000548263 PIM1P11309 404 aaPredicted RBP9.29□□□□□ -0.92
CALCOCO1-210ENST00000548263 PBLDP30039 288 aaPredicted RBP9.29□□□□□ -0.92
CALCOCO1-210ENST00000548263 HOXD12P35452 270 aa9.29□□□□□ -0.92
CALCOCO1-210ENST00000548263 GRK3P35626 688 aa9.29□□□□□ -0.92
CALCOCO1-210ENST00000548263 RPIAP49247 311 aa9.29□□□□□ -0.92
CALCOCO1-210ENST00000548263 KCNQ1P51787 676 aa9.29□□□□□ -0.92
CALCOCO1-210ENST00000548263 GRIK2Q13002 908 aa9.29□□□□□ -0.92
CALCOCO1-210ENST00000548263 TIGD6Q17RP2 521 aa9.29□□□□□ -0.92
CALCOCO1-210ENST00000548263 C18orf21Q32NC0 220 aaPredicted RBP9.29□□□□□ -0.92
CALCOCO1-210ENST00000548263 RFTN2Q52LD8 501 aaPredicted RBP9.29□□□□□ -0.92
CALCOCO1-210ENST00000548263 SPRED1Q7Z699 444 aa9.29□□□□□ -0.92
CALCOCO1-210ENST00000548263 CLIP4Q8N3C7 705 aa9.29□□□□□ -0.92
CALCOCO1-210ENST00000548263 FUBP1Q96AE4 644 aaKnown RBP9.29□□□□□ -0.92
CALCOCO1-210ENST00000548263 SH3KBP1Q96B97 665 aa9.29□□□□□ -0.92
CALCOCO1-210ENST00000548263 PYURFQ96I23 114 aa9.29□□□□□ -0.92
CALCOCO1-210ENST00000548263 TEX37Q96LM6 180 aa9.29□□□□□ -0.92
CALCOCO1-210ENST00000548263 KCNS3Q9BQ31 491 aa9.29□□□□□ -0.92
CALCOCO1-210ENST00000548263 CERS4Q9HA82 394 aa9.29□□□□□ -0.92
CALCOCO1-210ENST00000548263 VPS4AQ9UN37 437 aa9.29□□□□□ -0.92
CALCOCO1-210ENST00000548263 LOC730098B7Z3J9 87 aa9.29□□□□□ -0.92
CALCOCO1-210ENST00000548263 ERN1O75460 977 aaKnown RBP9.29□□□□□ -0.92
Retrieved 100 of 20,778 RNA–protein pairs in 21.8 ms