RNA–Protein interactions for RNA: ENST00000548232.1

NR4A1-209, Transcript of nuclear receptor subfamily 4 group A member 1, humanhuman

TSL 1 (best) BASIC

Gene NR4A1, Length 1,101 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NR4A1-209ENST00000548232 ATP1A4Q13733 1029 aa12.68□□□□□ -0.38
NR4A1-209ENST00000548232 TAF1AQ15573 450 aaPredicted RBP12.68□□□□□ -0.38
NR4A1-209ENST00000548232 ERCC6LQ2NKX8 1250 aa12.68□□□□□ -0.38
NR4A1-209ENST00000548232 BCL7AQ4VC05 210 aa12.68□□□□□ -0.38
NR4A1-209ENST00000548232 MLIPQ5VWP3 458 aa12.68□□□□□ -0.38
NR4A1-209ENST00000548232 ITPRIPL1Q6GPH6 555 aa12.68□□□□□ -0.38
NR4A1-209ENST00000548232 MED25Q71SY5 747 aa12.68□□□□□ -0.38
NR4A1-209ENST00000548232 SYTL1Q8IYJ3 562 aa12.68□□□□□ -0.38
NR4A1-209ENST00000548232 ZBTB2Q8N680 514 aa12.68□□□□□ -0.38
NR4A1-209ENST00000548232 ACVR1CQ8NER5 493 aa12.68□□□□□ -0.38
NR4A1-209ENST00000548232 ADAMTS17Q8TE56 1095 aa12.68□□□□□ -0.38
NR4A1-209ENST00000548232 N4BP2L2Q92802 583 aaPredicted RBP12.68□□□□□ -0.38
NR4A1-209ENST00000548232 C19orf60Q96EN9 201 aa12.68□□□□□ -0.38
NR4A1-209ENST00000548232 SGSM3Q96HU1 749 aa12.68□□□□□ -0.38
NR4A1-209ENST00000548232 XKR8Q9H6D3 395 aa12.68□□□□□ -0.38
NR4A1-209ENST00000548232 PCMTD2Q9NV79 361 aa12.68□□□□□ -0.38
NR4A1-209ENST00000548232 GPR83Q9NYM4 423 aa12.68□□□□□ -0.38
NR4A1-209ENST00000548232 PCDHGB7Q9Y5F8 929 aa12.68□□□□□ -0.38
NR4A1-209ENST00000548232 TNRC6AQ8NDV7 1962 aaKnown RBP12.68□□□□□ -0.38
NR4A1-209ENST00000548232 PRRC2CQ9Y520 2896 aaKnown RBP12.67□□□□□ -0.38
NR4A1-209ENST00000548232 C9J4A7 227 aa12.67□□□□□ -0.38
NR4A1-209ENST00000548232 CFAP99D6REC4 459 aa12.67□□□□□ -0.38
NR4A1-209ENST00000548232 IFRD1O00458 451 aaPredicted RBP12.67□□□□□ -0.38
NR4A1-209ENST00000548232 BTN3A3O00478 584 aa12.67□□□□□ -0.38
NR4A1-209ENST00000548232 CCL22O00626 93 aa12.67□□□□□ -0.38
NR4A1-209ENST00000548232 ZNF749O43361 778 aa12.67□□□□□ -0.38
NR4A1-209ENST00000548232 LDB2O43679 373 aa12.67□□□□□ -0.38
NR4A1-209ENST00000548232 SGTAO43765 313 aa12.67□□□□□ -0.38
NR4A1-209ENST00000548232 ZNF189O75820 626 aaPredicted RBP12.67□□□□□ -0.38
NR4A1-209ENST00000548232 CEACAM4O75871 244 aa12.67□□□□□ -0.38
NR4A1-209ENST00000548232 STK10O94804 968 aaKnown RBP12.67□□□□□ -0.38
NR4A1-209ENST00000548232 SUN1O94901 812 aa12.67□□□□□ -0.38
NR4A1-209ENST00000548232 AP2A1O95782 977 aa12.67□□□□□ -0.38
NR4A1-209ENST00000548232 RNF224P0DH78 156 aa12.67□□□□□ -0.38
NR4A1-209ENST00000548232 TPSB2P20231 275 aa12.67□□□□□ -0.38
NR4A1-209ENST00000548232 RORAP35398 523 aa12.67□□□□□ -0.38
NR4A1-209ENST00000548232 FDFT1P37268 417 aa12.67□□□□□ -0.38
NR4A1-209ENST00000548232 MAGEA3P43357 314 aa12.67□□□□□ -0.38
NR4A1-209ENST00000548232 ITGA8P53708 1063 aa12.67□□□□□ -0.38
NR4A1-209ENST00000548232 RRADP55042 308 aa12.67□□□□□ -0.38
NR4A1-209ENST00000548232 BASP1P80723 227 aaKnown RBP12.67□□□□□ -0.38
NR4A1-209ENST00000548232 GUCY2DQ02846 1103 aa12.67□□□□□ -0.38
NR4A1-209ENST00000548232 PRPSAP1Q14558 356 aa12.67□□□□□ -0.38
NR4A1-209ENST00000548232 TPSAB1Q15661 275 aa12.67□□□□□ -0.38
NR4A1-209ENST00000548232 GLE1Q53GS7 698 aaKnown RBP12.67□□□□□ -0.38
NR4A1-209ENST00000548232 SLC6A19Q695T7 634 aa12.67□□□□□ -0.38
NR4A1-209ENST00000548232 ZNF449Q6P9G9 518 aa12.67□□□□□ -0.38
NR4A1-209ENST00000548232 MICALCLQ6ZW33 695 aa12.67□□□□□ -0.38
NR4A1-209ENST00000548232 MAATS1Q7Z4T9 603 aa12.67□□□□□ -0.38
NR4A1-209ENST00000548232 HOOK3Q86VS8 718 aa12.67□□□□□ -0.38
NR4A1-209ENST00000548232 GSPT2Q8IYD1 628 aaKnown RBP12.67□□□□□ -0.38
NR4A1-209ENST00000548232 RBMXL3Q8N7X1 1067 aaKnown RBP12.67□□□□□ -0.38
NR4A1-209ENST00000548232 TMEM102Q8N9M5 508 aaPredicted RBP12.67□□□□□ -0.38
NR4A1-209ENST00000548232 Q8NA96 180 aa12.67□□□□□ -0.38
NR4A1-209ENST00000548232 OR13C4Q8NGS5 318 aa12.67□□□□□ -0.38
NR4A1-209ENST00000548232 HM13Q8TCT9 377 aa12.67□□□□□ -0.38
NR4A1-209ENST00000548232 LINC00615Q96LM1 132 aaPredicted RBP12.67□□□□□ -0.38
NR4A1-209ENST00000548232 COPS8Q99627 209 aa12.67□□□□□ -0.38
NR4A1-209ENST00000548232 SLC29A3Q9BZD2 475 aa12.67□□□□□ -0.38
NR4A1-209ENST00000548232 EIF2B3Q9NR50 452 aaKnown RBP12.67□□□□□ -0.38
NR4A1-209ENST00000548232 PIH1D1Q9NWS0 290 aaKnown RBP12.67□□□□□ -0.38
NR4A1-209ENST00000548232 E7EQ34 232 aa12.66□□□□□ -0.38
NR4A1-209ENST00000548232 MATN2O00339 956 aa12.66□□□□□ -0.38
NR4A1-209ENST00000548232 BTN3A1O00481 513 aa12.66□□□□□ -0.38
NR4A1-209ENST00000548232 BANF1O75531 89 aa12.66□□□□□ -0.38
NR4A1-209ENST00000548232 CRTAMO95727 393 aa12.66□□□□□ -0.38
NR4A1-209ENST00000548232 CAPN1P07384 714 aa12.66□□□□□ -0.38
NR4A1-209ENST00000548232 APRTP07741 180 aa12.66□□□□□ -0.38
NR4A1-209ENST00000548232 ATP1B2P14415 290 aaPredicted RBP12.66□□□□□ -0.38
NR4A1-209ENST00000548232 ITGALP20701 1170 aa12.66□□□□□ -0.38
NR4A1-209ENST00000548232 COL8A1P27658 744 aa12.66□□□□□ -0.38
NR4A1-209ENST00000548232 CARSP49589 748 aaKnown RBP12.66□□□□□ -0.38
NR4A1-209ENST00000548232 XIAPP98170 497 aa12.66□□□□□ -0.38
NR4A1-209ENST00000548232 NCF4Q15080 339 aa12.66□□□□□ -0.38
NR4A1-209ENST00000548232 PLEKHN1Q494U1 663 aaPredicted RBP12.66□□□□□ -0.38
NR4A1-209ENST00000548232 MSS51Q4VC12 460 aa12.66□□□□□ -0.38
NR4A1-209ENST00000548232 UBAP2Q5T6F2 1119 aaKnown RBP12.66□□□□□ -0.38
NR4A1-209ENST00000548232 C1orf189Q5VU69 101 aa12.66□□□□□ -0.38
NR4A1-209ENST00000548232 FAM198BQ6UWH4 519 aa12.66□□□□□ -0.38
NR4A1-209ENST00000548232 RANBP10Q6VN20 620 aa12.66□□□□□ -0.38
NR4A1-209ENST00000548232 TAS2R42Q7RTR8 314 aa12.66□□□□□ -0.38
NR4A1-209ENST00000548232 CAND1Q86VP6 1230 aaKnown RBP12.66□□□□□ -0.38
NR4A1-209ENST00000548232 AMIGO1Q86WK6 493 aa12.66□□□□□ -0.38
NR4A1-209ENST00000548232 RAB43Q86YS6 212 aa12.66□□□□□ -0.38
NR4A1-209ENST00000548232 GPR135Q8IZ08 494 aa12.66□□□□□ -0.38
NR4A1-209ENST00000548232 NXPE1Q8N323 547 aa12.66□□□□□ -0.38
NR4A1-209ENST00000548232 CISD2Q8N5K1 135 aaKnown RBP12.66□□□□□ -0.38
NR4A1-209ENST00000548232 FBXO25Q8TCJ0 367 aa12.66□□□□□ -0.38
NR4A1-209ENST00000548232 PNPLA2Q96AD5 504 aa12.66□□□□□ -0.38
NR4A1-209ENST00000548232 ULK4Q96C45 1275 aa12.66□□□□□ -0.38
NR4A1-209ENST00000548232 SNF8Q96H20 258 aa12.66□□□□□ -0.38
NR4A1-209ENST00000548232 TRAPPC9Q96Q05 1148 aa12.66□□□□□ -0.38
NR4A1-209ENST00000548232 FERMT1Q9BQL6 677 aa12.66□□□□□ -0.38
NR4A1-209ENST00000548232 SYTL2Q9HCH5 934 aa12.66□□□□□ -0.38
NR4A1-209ENST00000548232 CUEDC1Q9NWM3 386 aaPredicted RBP12.66□□□□□ -0.38
NR4A1-209ENST00000548232 WHRNQ9P202 907 aa12.66□□□□□ -0.38
NR4A1-209ENST00000548232 GPN3Q9UHW5 284 aaPredicted RBP12.66□□□□□ -0.38
NR4A1-209ENST00000548232 FEZ2Q9UHY8 353 aaPredicted RBP12.66□□□□□ -0.38
NR4A1-209ENST00000548232 PADI2Q9Y2J8 665 aa12.66□□□□□ -0.38
NR4A1-209ENST00000548232 AAR2Q9Y312 384 aaKnown RBP12.66□□□□□ -0.38
Retrieved 100 of 20,778 RNA–protein pairs in 77.2 ms