RNA–Protein interactions for RNA: ENST00000547486.1

CPSF6-204, Transcript of cleavage and polyadenylation specific factor 6, humanhuman

TSL 2

Gene CPSF6, Length 872 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CPSF6-204ENST00000547486 GPR135Q8IZ08 494 aa12.87□□□□□ -0.35
CPSF6-204ENST00000547486 CFAP61Q8NHU2 1237 aa12.87□□□□□ -0.35
CPSF6-204ENST00000547486 IL17FQ96PD4 163 aa12.87□□□□□ -0.35
CPSF6-204ENST00000547486 TTC1Q99614 292 aa12.87□□□□□ -0.35
CPSF6-204ENST00000547486 SLC25A23Q9BV35 468 aa12.87□□□□□ -0.35
CPSF6-204ENST00000547486 CARD6Q9BX69 1037 aa12.87□□□□□ -0.35
CPSF6-204ENST00000547486 SLC7A5P2Q9GIP4 190 aa12.87□□□□□ -0.35
CPSF6-204ENST00000547486 CHRNA10Q9GZZ6 450 aa12.87□□□□□ -0.35
CPSF6-204ENST00000547486 TREX1Q9NSU2 369 aa12.87□□□□□ -0.35
CPSF6-204ENST00000547486 DRG1Q9Y295 367 aaKnown RBP12.87□□□□□ -0.35
CPSF6-204ENST00000547486 PCDHGA9Q9Y5G4 932 aaKnown RBP12.87□□□□□ -0.35
CPSF6-204ENST00000547486 HECTD1Q9ULT8 2610 aa12.87□□□□□ -0.35
CPSF6-204ENST00000547486 CLEC18AA5D8T8 446 aa12.86□□□□□ -0.35
CPSF6-204ENST00000547486 A6NL46 340 aa12.86□□□□□ -0.35
CPSF6-204ENST00000547486 ZNF185O15231 689 aa12.86□□□□□ -0.35
CPSF6-204ENST00000547486 CD3EAPO15446 510 aaKnown RBP12.86□□□□□ -0.35
CPSF6-204ENST00000547486 CEACAM4O75871 244 aa12.86□□□□□ -0.35
CPSF6-204ENST00000547486 SLCO2B1O94956 709 aa12.86□□□□□ -0.35
CPSF6-204ENST00000547486 ATXN8OSP0DMR3 200 aa12.86□□□□□ -0.35
CPSF6-204ENST00000547486 AGXTP21549 392 aa12.86□□□□□ -0.35
CPSF6-204ENST00000547486 NMBRP28336 390 aa12.86□□□□□ -0.35
CPSF6-204ENST00000547486 PKLRP30613 574 aa12.86□□□□□ -0.35
CPSF6-204ENST00000547486 KCNJ1P48048 391 aa12.86□□□□□ -0.35
CPSF6-204ENST00000547486 CD97P48960 835 aa12.86□□□□□ -0.35
CPSF6-204ENST00000547486 PGDP52209 483 aa12.86□□□□□ -0.35
CPSF6-204ENST00000547486 SLC5A12Q1EHB4 618 aa12.86□□□□□ -0.35
CPSF6-204ENST00000547486 DNAJC21Q5F1R6 531 aaKnown RBP12.86□□□□□ -0.35
CPSF6-204ENST00000547486 MLIPQ5VWP3 458 aa12.86□□□□□ -0.35
CPSF6-204ENST00000547486 RHBDD2Q6NTF9 364 aa12.86□□□□□ -0.35
CPSF6-204ENST00000547486 DRICH1Q6PGQ1 229 aaPredicted RBP12.86□□□□□ -0.35
CPSF6-204ENST00000547486 CLEC18BQ6UXF7 455 aa12.86□□□□□ -0.35
CPSF6-204ENST00000547486 ZNF655Q8N720 491 aaPredicted RBP12.86□□□□□ -0.35
CPSF6-204ENST00000547486 CLEC18CQ8NCF0 446 aa12.86□□□□□ -0.35
CPSF6-204ENST00000547486 PPHLN1Q8NEY8 458 aaKnown RBP12.86□□□□□ -0.35
CPSF6-204ENST00000547486 FDCSPQ8NFU4 85 aa12.86□□□□□ -0.35
CPSF6-204ENST00000547486 UBE2Q2Q8WVN8 375 aa12.86□□□□□ -0.35
CPSF6-204ENST00000547486 ASZ1Q8WWH4 475 aa12.86□□□□□ -0.35
CPSF6-204ENST00000547486 N4BP2L2Q92802 583 aaPredicted RBP12.86□□□□□ -0.35
CPSF6-204ENST00000547486 PEX13Q92968 403 aa12.86□□□□□ -0.35
CPSF6-204ENST00000547486 GBP5Q96PP8 586 aa12.86□□□□□ -0.35
CPSF6-204ENST00000547486 DPH2Q9BQC3 489 aaPredicted RBP12.86□□□□□ -0.35
CPSF6-204ENST00000547486 P2RY12Q9H244 342 aa12.86□□□□□ -0.35
CPSF6-204ENST00000547486 LZTFL1Q9NQ48 299 aa12.86□□□□□ -0.35
CPSF6-204ENST00000547486 CATSPERZQ9NTU4 200 aa12.86□□□□□ -0.35
CPSF6-204ENST00000547486 DHCR7Q9UBM7 475 aaKnown RBP12.86□□□□□ -0.35
CPSF6-204ENST00000547486 AP1M2Q9Y6Q5 423 aa12.86□□□□□ -0.35
CPSF6-204ENST00000547486 PCSK5Q92824 1860 aa12.86□□□□□ -0.35
CPSF6-204ENST00000547486 TCRBV7S3A2A0A539 114 aa12.85□□□□□ -0.35
CPSF6-204ENST00000547486 PRMT5O14744 637 aaPredicted RBP12.85□□□□□ -0.35
CPSF6-204ENST00000547486 CNOT3O75175 753 aaKnown RBP12.85□□□□□ -0.35
CPSF6-204ENST00000547486 FGGP02679 453 aa12.85□□□□□ -0.35
CPSF6-204ENST00000547486 HBQ1P09105 142 aa12.85□□□□□ -0.35
CPSF6-204ENST00000547486 CD9P21926 228 aa12.85□□□□□ -0.35
CPSF6-204ENST00000547486 RAB28P51157 221 aa12.85□□□□□ -0.35
CPSF6-204ENST00000547486 ATP1A4Q13733 1029 aa12.85□□□□□ -0.35
CPSF6-204ENST00000547486 KIR2DS3Q14952 304 aa12.85□□□□□ -0.35
CPSF6-204ENST00000547486 CES3Q6UWW8 571 aa12.85□□□□□ -0.35
CPSF6-204ENST00000547486 NUDT9Q9BW91 350 aa12.85□□□□□ -0.35
CPSF6-204ENST00000547486 EIF2B3Q9NR50 452 aaKnown RBP12.85□□□□□ -0.35
CPSF6-204ENST00000547486 SLC22A11Q9NSA0 550 aa12.85□□□□□ -0.35
CPSF6-204ENST00000547486 EURLQ9NYK6 297 aa12.85□□□□□ -0.35
CPSF6-204ENST00000547486 KRT87PA6NCN2 255 aa12.84□□□□□ -0.35
CPSF6-204ENST00000547486 TTLL8A6PVC2 850 aa12.84□□□□□ -0.35
CPSF6-204ENST00000547486 C9J4A7 227 aa12.84□□□□□ -0.35
CPSF6-204ENST00000547486 MASP2O00187 686 aa12.84□□□□□ -0.35
CPSF6-204ENST00000547486 ZSCAN9O15535 394 aaPredicted RBP12.84□□□□□ -0.35
CPSF6-204ENST00000547486 APOA4P06727 396 aa12.84□□□□□ -0.35
CPSF6-204ENST00000547486 MAGP20916 626 aa12.84□□□□□ -0.35
CPSF6-204ENST00000547486 MGAT1P26572 445 aa12.84□□□□□ -0.35
CPSF6-204ENST00000547486 ARNTP27540 789 aa12.84□□□□□ -0.35
CPSF6-204ENST00000547486 OTX2P32243 289 aa12.84□□□□□ -0.35
CPSF6-204ENST00000547486 CXCR5P32302 372 aa12.84□□□□□ -0.35
CPSF6-204ENST00000547486 GRIA3P42263 894 aa12.84□□□□□ -0.35
CPSF6-204ENST00000547486 GCGRP47871 477 aa12.84□□□□□ -0.35
CPSF6-204ENST00000547486 NPY2RP49146 381 aa12.84□□□□□ -0.35
CPSF6-204ENST00000547486 TTPAP49638 278 aa12.84□□□□□ -0.35
CPSF6-204ENST00000547486 BASP1P80723 227 aaKnown RBP12.84□□□□□ -0.35
CPSF6-204ENST00000547486 DCDP81605 110 aaKnown RBP12.84□□□□□ -0.35
CPSF6-204ENST00000547486 RAPSNQ13702 412 aa12.84□□□□□ -0.35
CPSF6-204ENST00000547486 SLC9A5Q14940 896 aa12.84□□□□□ -0.35
CPSF6-204ENST00000547486 CCSMST1Q4G0I0 132 aa12.84□□□□□ -0.35
CPSF6-204ENST00000547486 AARS2Q5JTZ9 985 aaKnown RBP12.84□□□□□ -0.35
CPSF6-204ENST00000547486 FCRL6Q6DN72 434 aa12.84□□□□□ -0.35
CPSF6-204ENST00000547486 PTRHD1Q6GMV3 140 aaKnown RBP12.84□□□□□ -0.35
CPSF6-204ENST00000547486 UNC5DQ6UXZ4 953 aa12.84□□□□□ -0.35
CPSF6-204ENST00000547486 ZNF662Q6ZS27 426 aa12.84□□□□□ -0.35
CPSF6-204ENST00000547486 MED25Q71SY5 747 aa12.84□□□□□ -0.35
CPSF6-204ENST00000547486 TAX1BP1Q86VP1 789 aa12.84□□□□□ -0.35
CPSF6-204ENST00000547486 MCATQ8IVS2 390 aaKnown RBP12.84□□□□□ -0.35
CPSF6-204ENST00000547486 MFSD3Q96ES6 412 aa12.84□□□□□ -0.35
CPSF6-204ENST00000547486 DHRS4Q9BTZ2 278 aa12.84□□□□□ -0.35
CPSF6-204ENST00000547486 KIFC1Q9BW19 673 aa12.84□□□□□ -0.35
CPSF6-204ENST00000547486 SYBUQ9NX95 663 aa12.84□□□□□ -0.35
CPSF6-204ENST00000547486 ANKMY1Q9P2S6 941 aa12.84□□□□□ -0.35
CPSF6-204ENST00000547486 ANAPC5Q9UJX4 755 aa12.84□□□□□ -0.35
CPSF6-204ENST00000547486 PLCL2Q9UPR0 1127 aa12.84□□□□□ -0.35
CPSF6-204ENST00000547486 NFS1Q9Y697 457 aa12.84□□□□□ -0.35
CPSF6-204ENST00000547486 FLNCQ14315 2725 aa12.84□□□□□ -0.35
CPSF6-204ENST00000547486 NBASA2RRP1 2371 aa12.83□□□□□ -0.36
CPSF6-204ENST00000547486 GOLGA8KD6RF30 607 aa12.83□□□□□ -0.36
Retrieved 100 of 20,778 RNA–protein pairs in 55.1 ms