RNA–Protein interactions for RNA: ENST00000546942.1

SRSF9-202, Transcript of serine and arginine rich splicing factor 9, humanhuman

TSL 1 (best)

Gene SRSF9, Length 946 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SRSF9-202ENST00000546942 ZNF789Q5FWF6 425 aa25.52■■□□□ 1.68
SRSF9-202ENST00000546942 MRNIPQ6NTE8 343 aa25.52■■□□□ 1.68
SRSF9-202ENST00000546942 ATG14Q6ZNE5 492 aa25.52■■□□□ 1.68
SRSF9-202ENST00000546942 TAX1BP1Q86VP1 789 aa25.52■■□□□ 1.68
SRSF9-202ENST00000546942 FAM20CQ8IXL6 584 aa25.52■■□□□ 1.68
SRSF9-202ENST00000546942 SLC35F6Q8N357 371 aa25.52■■□□□ 1.68
SRSF9-202ENST00000546942 TCTN2Q96GX1 697 aa25.52■■□□□ 1.68
SRSF9-202ENST00000546942 PANX3Q96QZ0 392 aa25.52■■□□□ 1.68
SRSF9-202ENST00000546942 TSR3Q9UJK0 312 aaKnown RBP25.52■■□□□ 1.68
SRSF9-202ENST00000546942 TRBV21OR9-2A0A075B6F4 123 aaPredicted RBP25.51■■□□□ 1.67
SRSF9-202ENST00000546942 ZNF749O43361 778 aa25.51■■□□□ 1.67
SRSF9-202ENST00000546942 SUV39H1O43463 412 aa25.51■■□□□ 1.67
SRSF9-202ENST00000546942 RPN2P04844 631 aa25.51■■□□□ 1.67
SRSF9-202ENST00000546942 MSL3P1P0C860 447 aa25.51■■□□□ 1.67
SRSF9-202ENST00000546942 PEBP1P30086 187 aaKnown RBP25.51■■□□□ 1.67
SRSF9-202ENST00000546942 CCDC137Q6PK04 289 aaKnown RBP25.51■■□□□ 1.67
SRSF9-202ENST00000546942 OTOAQ7RTW8 1153 aa25.51■■□□□ 1.67
SRSF9-202ENST00000546942 REXO1L1PQ8IX06 675 aa25.51■■□□□ 1.67
SRSF9-202ENST00000546942 GPR135Q8IZ08 494 aa25.51■■□□□ 1.67
SRSF9-202ENST00000546942 FLVCR1-AS1Q8TAF5 88 aa25.51■■□□□ 1.67
SRSF9-202ENST00000546942 FAM136AQ96C01 138 aa25.51■■□□□ 1.67
SRSF9-202ENST00000546942 IL17FQ96PD4 163 aa25.51■■□□□ 1.67
SRSF9-202ENST00000546942 TRIM56Q9BRZ2 755 aaKnown RBP25.51■■□□□ 1.67
SRSF9-202ENST00000546942 PCMTD2Q9NV79 361 aa25.51■■□□□ 1.67
SRSF9-202ENST00000546942 SAMD15Q9P1V8 674 aa25.51■■□□□ 1.67
SRSF9-202ENST00000546942 PGRMC1O00264 195 aaKnown RBP25.5■■□□□ 1.67
SRSF9-202ENST00000546942 HCRTR1O43613 425 aa25.5■■□□□ 1.67
SRSF9-202ENST00000546942 SLCO2B1O94956 709 aa25.5■■□□□ 1.67
SRSF9-202ENST00000546942 PKLRP30613 574 aa25.5■■□□□ 1.67
SRSF9-202ENST00000546942 RAB28P51157 221 aa25.5■■□□□ 1.67
SRSF9-202ENST00000546942 KIR2DS3Q14952 304 aa25.5■■□□□ 1.67
SRSF9-202ENST00000546942 KYNUQ16719 465 aa25.5■■□□□ 1.67
SRSF9-202ENST00000546942 PTCHD3Q3KNS1 767 aa25.5■■□□□ 1.67
SRSF9-202ENST00000546942 FAM69BQ5VUD6 431 aa25.5■■□□□ 1.67
SRSF9-202ENST00000546942 UNC5DQ6UXZ4 953 aa25.5■■□□□ 1.67
SRSF9-202ENST00000546942 CAND1Q86VP6 1230 aaKnown RBP25.5■■□□□ 1.67
SRSF9-202ENST00000546942 LRRC6Q86X45 466 aa25.5■■□□□ 1.67
SRSF9-202ENST00000546942 DCUN1D3Q8IWE4 304 aa25.5■■□□□ 1.67
SRSF9-202ENST00000546942 SYTL1Q8IYJ3 562 aa25.5■■□□□ 1.67
SRSF9-202ENST00000546942 ENDOVQ8N8Q3 282 aaKnown RBP25.5■■□□□ 1.67
SRSF9-202ENST00000546942 COG1Q8WTW3 980 aa25.5■■□□□ 1.67
SRSF9-202ENST00000546942 LRFN5Q96NI6 719 aa25.5■■□□□ 1.67
SRSF9-202ENST00000546942 NAP1L3Q99457 506 aaPredicted RBP25.5■■□□□ 1.67
SRSF9-202ENST00000546942 SPRTNQ9H040 489 aaPredicted RBP25.5■■□□□ 1.67
SRSF9-202ENST00000546942 IRAK4Q9NWZ3 460 aa25.5■■□□□ 1.67
SRSF9-202ENST00000546942 TRMT1Q9NXH9 659 aaKnown RBP25.5■■□□□ 1.67
SRSF9-202ENST00000546942 IL1RAPL1Q9NZN1 696 aa25.5■■□□□ 1.67
SRSF9-202ENST00000546942 KLHL20Q9Y2M5 609 aa25.5■■□□□ 1.67
SRSF9-202ENST00000546942 CRYL1Q9Y2S2 319 aa25.5■■□□□ 1.67
SRSF9-202ENST00000546942 OR2B3O76000 313 aa25.49■■□□□ 1.67
SRSF9-202ENST00000546942 TMEM63AO94886 807 aa25.49■■□□□ 1.67
SRSF9-202ENST00000546942 RPS3P23396 243 aaKnown RBP eCLIP25.49■■□□□ 1.672e-6■■□□□ 14.1
SRSF9-202ENST00000546942 RORAP35398 523 aa25.49■■□□□ 1.67
SRSF9-202ENST00000546942 IL10RAQ13651 578 aa25.49■■□□□ 1.67
SRSF9-202ENST00000546942 CTSL3PQ5NE16 218 aa25.49■■□□□ 1.67
SRSF9-202ENST00000546942 ZNF517Q6ZMY9 492 aaPredicted RBP25.49■■□□□ 1.67
SRSF9-202ENST00000546942 SYVN1Q86TM6 617 aa25.49■■□□□ 1.67
SRSF9-202ENST00000546942 LINC01555Q8NAE3 123 aa25.49■■□□□ 1.67
SRSF9-202ENST00000546942 OSBPL9Q96SU4 736 aa25.49■■□□□ 1.67
SRSF9-202ENST00000546942 KCNF1Q9H3M0 494 aa25.49■■□□□ 1.67
SRSF9-202ENST00000546942 SLC39A10Q9ULF5 831 aa25.49■■□□□ 1.67
SRSF9-202ENST00000546942 SNX7Q9UNH6 387 aa25.49■■□□□ 1.67
SRSF9-202ENST00000546942 RUVBL2Q9Y230 463 aaKnown RBP25.49■■□□□ 1.67
SRSF9-202ENST00000546942 KPNA5O15131 536 aa25.48■■□□□ 1.67
SRSF9-202ENST00000546942 PFDN6O15212 129 aa25.48■■□□□ 1.67
SRSF9-202ENST00000546942 RECKO95980 971 aa25.48■■□□□ 1.67
SRSF9-202ENST00000546942 PAMP19021 973 aa25.48■■□□□ 1.67
SRSF9-202ENST00000546942 MAGEA6P43360 314 aa25.48■■□□□ 1.67
SRSF9-202ENST00000546942 UGT8Q16880 541 aa25.48■■□□□ 1.67
SRSF9-202ENST00000546942 SLC5A12Q1EHB4 618 aa25.48■■□□□ 1.67
SRSF9-202ENST00000546942 COLEC12Q5KU26 742 aa25.48■■□□□ 1.67
SRSF9-202ENST00000546942 IZUMO3Q5VZ72 239 aa25.48■■□□□ 1.67
SRSF9-202ENST00000546942 TTC23LQ6PF05 361 aa25.48■■□□□ 1.67
SRSF9-202ENST00000546942 CAMSAP3Q9P1Y5 1249 aaPredicted RBP25.48■■□□□ 1.67
SRSF9-202ENST00000546942 NFS1Q9Y697 457 aa25.48■■□□□ 1.67
SRSF9-202ENST00000546942 SEC16AO15027 2179 aa25.48■■□□□ 1.67
SRSF9-202ENST00000546942 MKRN2OSH3BPM6 223 aa25.47■■□□□ 1.67
SRSF9-202ENST00000546942 NIPSNAP2O75323 286 aa25.47■■□□□ 1.67
SRSF9-202ENST00000546942 RFPL1O75677 317 aa25.47■■□□□ 1.67
SRSF9-202ENST00000546942 DNAJB5O75953 348 aa25.47■■□□□ 1.67
SRSF9-202ENST00000546942 CTSBP07858 339 aa25.47■■□□□ 1.67
SRSF9-202ENST00000546942 NR1D1P20393 614 aa25.47■■□□□ 1.67
SRSF9-202ENST00000546942 CD9P21926 228 aa25.47■■□□□ 1.67
SRSF9-202ENST00000546942 BDKRB1P46663 353 aa25.47■■□□□ 1.67
SRSF9-202ENST00000546942 GRB7Q14451 532 aa25.47■■□□□ 1.67
SRSF9-202ENST00000546942 LACTB2Q53H82 288 aaPredicted RBP25.47■■□□□ 1.67
SRSF9-202ENST00000546942 C1orf189Q5VU69 101 aa25.47■■□□□ 1.67
SRSF9-202ENST00000546942 KIAA0930Q6ICG6 404 aaPredicted RBP25.47■■□□□ 1.67
SRSF9-202ENST00000546942 CNSTQ6PJW8 725 aa25.47■■□□□ 1.67
SRSF9-202ENST00000546942 SEC14L1Q92503 715 aa25.47■■□□□ 1.67
SRSF9-202ENST00000546942 LPGAT1Q92604 370 aa25.47■■□□□ 1.67
SRSF9-202ENST00000546942 BIRC8Q96P09 236 aa25.47■■□□□ 1.67
SRSF9-202ENST00000546942 MENTQ9BUN1 341 aa25.47■■□□□ 1.67
SRSF9-202ENST00000546942 NLNQ9BYT8 704 aa25.47■■□□□ 1.67
SRSF9-202ENST00000546942 TLK1Q9UKI8 766 aa25.47■■□□□ 1.67
SRSF9-202ENST00000546942 TP53TG5Q9Y2B4 290 aa25.47■■□□□ 1.67
SRSF9-202ENST00000546942 KRT87PA6NCN2 255 aa25.46■■□□□ 1.67
SRSF9-202ENST00000546942 SDR42E2A6NKP2 422 aa25.46■■□□□ 1.67
SRSF9-202ENST00000546942 F7P08709 466 aaPredicted RBP25.46■■□□□ 1.67
SRSF9-202ENST00000546942 HBQ1P09105 142 aa25.46■■□□□ 1.67
Retrieved 100 of 20,778 RNA–protein pairs in 29.1 ms