RNA–Protein interactions for RNA: ENST00000546803.5

CCDC38-203, Transcript of coiled-coil domain containing 38, humanhuman

TSL 4

Gene CCDC38, Length 511 nt, Biotype nonsense mediated decay.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC38-203ENST00000546803 LINGO1Q96FE5 620 aa16.29■□□□□ 0.2
CCDC38-203ENST00000546803 PRR11Q96HE9 360 aaPredicted RBP16.29■□□□□ 0.2
CCDC38-203ENST00000546803 ZNF768Q9H5H4 540 aaKnown RBP16.29■□□□□ 0.2
CCDC38-203ENST00000546803 ACTR10Q9NZ32 417 aa16.29■□□□□ 0.2
CCDC38-203ENST00000546803 POMT2Q9UKY4 750 aa16.29■□□□□ 0.2
CCDC38-203ENST00000546803 PLAGL1Q9UM63 463 aa16.29■□□□□ 0.2
CCDC38-203ENST00000546803 MTO1Q9Y2Z2 717 aaKnown RBP16.29■□□□□ 0.2
CCDC38-203ENST00000546803 BPTFQ12830 3046 aa16.28■□□□□ 0.2
CCDC38-203ENST00000546803 A0A087WUV0 522 aaPredicted RBP16.28■□□□□ 0.2
CCDC38-203ENST00000546803 TMEM8BA6NDV4 472 aa16.28■□□□□ 0.2
CCDC38-203ENST00000546803 B4E171 279 aa16.28■□□□□ 0.2
CCDC38-203ENST00000546803 MYO1CO00159 1063 aa16.28■□□□□ 0.2
CCDC38-203ENST00000546803 TNFSF15O95150 251 aa16.28■□□□□ 0.2
CCDC38-203ENST00000546803 ITGA2BP08514 1039 aa16.28■□□□□ 0.2
CCDC38-203ENST00000546803 FAM153BP0C7A2 387 aa16.28■□□□□ 0.2
CCDC38-203ENST00000546803 ZNF37AP17032 561 aaPredicted RBP16.28■□□□□ 0.2
CCDC38-203ENST00000546803 PRDX3P30048 256 aaKnown RBP16.28■□□□□ 0.2
CCDC38-203ENST00000546803 HSD17B2P37059 387 aa16.28■□□□□ 0.2
CCDC38-203ENST00000546803 TSPAN7P41732 249 aa16.28■□□□□ 0.2
CCDC38-203ENST00000546803 KPNA2P52292 529 aaKnown RBP16.28■□□□□ 0.2
CCDC38-203ENST00000546803 PPP1CAP62136 330 aa16.28■□□□□ 0.2
CCDC38-203ENST00000546803 CYP4F3Q08477 520 aa16.28■□□□□ 0.2
CCDC38-203ENST00000546803 KIR2DS3Q14952 304 aa16.28■□□□□ 0.2
CCDC38-203ENST00000546803 ARHGAP19Q14CB8 494 aa16.28■□□□□ 0.2
CCDC38-203ENST00000546803 EFTUD2Q15029 972 aaKnown RBP eCLIP16.28■□□□□ 0.2
CCDC38-203ENST00000546803 FAM153CQ494X1 144 aa16.28■□□□□ 0.2
CCDC38-203ENST00000546803 EEF1AKMT2Q5JPI9 291 aaKnown RBP16.28■□□□□ 0.2
CCDC38-203ENST00000546803 ANKS6Q68DC2 871 aa16.28■□□□□ 0.2
CCDC38-203ENST00000546803 FOXR1Q6PIV2 292 aa16.28■□□□□ 0.2
CCDC38-203ENST00000546803 HMGCLL1Q8TB92 370 aa16.28■□□□□ 0.2
CCDC38-203ENST00000546803 ANKRD7Q92527 254 aa16.28■□□□□ 0.2
CCDC38-203ENST00000546803 SLC22A18Q96BI1 424 aa16.28■□□□□ 0.2
CCDC38-203ENST00000546803 SLC46A1Q96NT5 459 aa16.28■□□□□ 0.2
CCDC38-203ENST00000546803 NRTNQ99748 197 aa16.28■□□□□ 0.2
CCDC38-203ENST00000546803 MAP3K3Q99759 626 aa16.28■□□□□ 0.2
CCDC38-203ENST00000546803 SLC12A9Q9BXP2 914 aa16.28■□□□□ 0.2
CCDC38-203ENST00000546803 TXLNGYQ9BZA5 131 aa16.28■□□□□ 0.2
CCDC38-203ENST00000546803 B3GNT4Q9C0J1 378 aa16.28■□□□□ 0.2
CCDC38-203ENST00000546803 CCDC86Q9H6F5 360 aaKnown RBP16.28■□□□□ 0.2
CCDC38-203ENST00000546803 ANKZF1Q9H8Y5 726 aa16.28■□□□□ 0.2
CCDC38-203ENST00000546803 C1GALT1Q9NS00 363 aa16.28■□□□□ 0.2
CCDC38-203ENST00000546803 PISDQ9UG56 409 aa16.28■□□□□ 0.2
CCDC38-203ENST00000546803 ZNF839A8K0R7 811 aa16.27■□□□□ 0.2
CCDC38-203ENST00000546803 KIF1CO43896 1103 aaKnown RBP16.27■□□□□ 0.2
CCDC38-203ENST00000546803 BRINP1O60477 761 aa16.27■□□□□ 0.2
CCDC38-203ENST00000546803 ZBTB11O95625 1053 aaPredicted RBP16.27■□□□□ 0.2
CCDC38-203ENST00000546803 TSPAN12O95859 305 aa16.27■□□□□ 0.2
CCDC38-203ENST00000546803 STMN1P16949 149 aa16.27■□□□□ 0.2
CCDC38-203ENST00000546803 NELFEP18615 380 aaKnown RBP16.27■□□□□ 0.2
CCDC38-203ENST00000546803 CYP2A7P20853 494 aa16.27■□□□□ 0.2
CCDC38-203ENST00000546803 ERVPABLB-1P60509 514 aa16.27■□□□□ 0.2
CCDC38-203ENST00000546803 CYP2A13Q16696 494 aa16.27■□□□□ 0.2
CCDC38-203ENST00000546803 CCSMST1Q4G0I0 132 aa16.27■□□□□ 0.2
CCDC38-203ENST00000546803 SPESP1Q6UW49 350 aa16.27■□□□□ 0.2
CCDC38-203ENST00000546803 UBE2R2Q712K3 238 aaPredicted RBP16.27■□□□□ 0.2
CCDC38-203ENST00000546803 CEP97Q8IW35 865 aa16.27■□□□□ 0.2
CCDC38-203ENST00000546803 MCOLN3Q8TDD5 553 aa16.27■□□□□ 0.2
CCDC38-203ENST00000546803 SLC44A1Q8WWI5 657 aa16.27■□□□□ 0.2
CCDC38-203ENST00000546803 SLC41A2Q96JW4 573 aa16.27■□□□□ 0.2
CCDC38-203ENST00000546803 ZNF578Q96N58 590 aaPredicted RBP16.27■□□□□ 0.2
CCDC38-203ENST00000546803 IL17FQ96PD4 163 aa16.27■□□□□ 0.2
CCDC38-203ENST00000546803 PITPNM3Q9BZ71 974 aa16.27■□□□□ 0.2
CCDC38-203ENST00000546803 GPAMQ9HCL2 828 aa16.27■□□□□ 0.2
CCDC38-203ENST00000546803 THSD1Q9NS62 852 aa16.27■□□□□ 0.2
CCDC38-203ENST00000546803 NCOR2Q9Y618 2525 aa16.27■□□□□ 0.2
CCDC38-203ENST00000546803 IGHV5-51A0A0C4DH38 117 aa16.26■□□□□ 0.19
CCDC38-203ENST00000546803 EFCAB7A8K855 629 aa16.26■□□□□ 0.19
CCDC38-203ENST00000546803 CDRT15L2A8MXV6 281 aa16.26■□□□□ 0.19
CCDC38-203ENST00000546803 ISM1B1AKI9 464 aa16.26■□□□□ 0.19
CCDC38-203ENST00000546803 C1QTNF9BB2RNN3 333 aa16.26■□□□□ 0.19
CCDC38-203ENST00000546803 MAP3K7O43318 606 aa16.26■□□□□ 0.19
CCDC38-203ENST00000546803 RIPK2O43353 540 aa16.26■□□□□ 0.19
CCDC38-203ENST00000546803 FAM155BO75949 473 aa16.26■□□□□ 0.19
CCDC38-203ENST00000546803 FKBP9O95302 570 aa16.26■□□□□ 0.19
CCDC38-203ENST00000546803 INHBAP08476 426 aa16.26■□□□□ 0.19
CCDC38-203ENST00000546803 C1QTNF9P0C862 333 aa16.26■□□□□ 0.19
CCDC38-203ENST00000546803 MYBL2P10244 700 aa16.26■□□□□ 0.19
CCDC38-203ENST00000546803 ERGP11308 486 aa16.26■□□□□ 0.19
CCDC38-203ENST00000546803 FGF3P11487 239 aaPredicted RBP16.26■□□□□ 0.19
CCDC38-203ENST00000546803 CCL4P13236 92 aa16.26■□□□□ 0.19
CCDC38-203ENST00000546803 HGFP14210 728 aa16.26■□□□□ 0.19
CCDC38-203ENST00000546803 CDH3P22223 829 aa16.26■□□□□ 0.19
CCDC38-203ENST00000546803 ARL4DP49703 201 aa16.26■□□□□ 0.19
CCDC38-203ENST00000546803 SEPHS1P49903 392 aa16.26■□□□□ 0.19
CCDC38-203ENST00000546803 RAB10P61026 200 aa16.26■□□□□ 0.19
CCDC38-203ENST00000546803 MC2RQ01718 297 aa16.26■□□□□ 0.19
CCDC38-203ENST00000546803 ZKSCAN8Q15776 578 aaPredicted RBP16.26■□□□□ 0.19
CCDC38-203ENST00000546803 SLC5A12Q1EHB4 618 aa16.26■□□□□ 0.19
CCDC38-203ENST00000546803 UBAP2Q5T6F2 1119 aaKnown RBP16.26■□□□□ 0.19
CCDC38-203ENST00000546803 TMEM164Q5U3C3 297 aa16.26■□□□□ 0.19
CCDC38-203ENST00000546803 CYB5D1Q6P9G0 228 aa16.26■□□□□ 0.19
CCDC38-203ENST00000546803 TMEM207Q6UWW9 146 aa16.26■□□□□ 0.19
CCDC38-203ENST00000546803 CCDC91Q7Z6B0 441 aa16.26■□□□□ 0.19
CCDC38-203ENST00000546803 FAM129CQ86XR2 697 aa16.26■□□□□ 0.19
CCDC38-203ENST00000546803 SPNS2Q8IVW8 549 aa16.26■□□□□ 0.19
CCDC38-203ENST00000546803 BMPERQ8N8U9 685 aa16.26■□□□□ 0.19
CCDC38-203ENST00000546803 LINC01555Q8NAE3 123 aa16.26■□□□□ 0.19
CCDC38-203ENST00000546803 DENND1AQ8TEH3 1009 aa16.26■□□□□ 0.19
CCDC38-203ENST00000546803 OR2A14Q96R47 310 aa16.26■□□□□ 0.19
CCDC38-203ENST00000546803 TAAR9Q96RI9 348 aa16.26■□□□□ 0.19
Retrieved 100 of 20,778 RNA–protein pairs in 22.5 ms