RNA–Protein interactions for RNA: ENST00000544996.1

CCDC78-216, Transcript of coiled-coil domain containing 78, humanhuman

TSL 4

Gene CCDC78, Length 551 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC78-216ENST00000544996 ST6GAL1P15907 406 aa15.21■□□□□ 0.03
CCDC78-216ENST00000544996 UGT2B7P16662 529 aa15.21■□□□□ 0.03
CCDC78-216ENST00000544996 CD9P21926 228 aa15.21■□□□□ 0.03
CCDC78-216ENST00000544996 PKLRP30613 574 aa15.21■□□□□ 0.03
CCDC78-216ENST00000544996 TAF1BQ53T94 588 aaPredicted RBP15.21■□□□□ 0.03
CCDC78-216ENST00000544996 PWWP2BQ6NUJ5 590 aa15.21■□□□□ 0.03
CCDC78-216ENST00000544996 CNSTQ6PJW8 725 aa15.21■□□□□ 0.03
CCDC78-216ENST00000544996 TMEM126BQ8IUX1 230 aa15.21■□□□□ 0.03
CCDC78-216ENST00000544996 GALNT6Q8NCL4 622 aa15.21■□□□□ 0.03
CCDC78-216ENST00000544996 KCNJ9Q92806 393 aa15.21■□□□□ 0.03
CCDC78-216ENST00000544996 TRAPPC9Q96Q05 1148 aa15.21■□□□□ 0.03
CCDC78-216ENST00000544996 OR2A14Q96R47 310 aa15.21■□□□□ 0.03
CCDC78-216ENST00000544996 PPANQ9NQ55 473 aaKnown RBP15.21■□□□□ 0.03
CCDC78-216ENST00000544996 SPHK1Q9NYA1 384 aa15.21■□□□□ 0.03
CCDC78-216ENST00000544996 KLHL42Q9P2K6 505 aa15.21■□□□□ 0.03
CCDC78-216ENST00000544996 ZC3H7BQ9UGR2 993 aaKnown RBP15.21■□□□□ 0.03
CCDC78-216ENST00000544996 PADI1Q9ULC6 663 aa15.21■□□□□ 0.03
CCDC78-216ENST00000544996 CHD6Q8TD26 2715 aa15.21■□□□□ 0.02
CCDC78-216ENST00000544996 A0A0J9YY10 115 aa15.2■□□□□ 0.02
CCDC78-216ENST00000544996 FAM187AA6NFU0 413 aa15.2■□□□□ 0.02
CCDC78-216ENST00000544996 RASGRF2O14827 1237 aa15.2■□□□□ 0.02
CCDC78-216ENST00000544996 HAUS5O94927 633 aa15.2■□□□□ 0.02
CCDC78-216ENST00000544996 C1orf105O95561 183 aa15.2■□□□□ 0.02
CCDC78-216ENST00000544996 MSL3P1P0C860 447 aa15.2■□□□□ 0.02
CCDC78-216ENST00000544996 PVRP15151 417 aa15.2■□□□□ 0.02
CCDC78-216ENST00000544996 ELK3P41970 407 aa15.2■□□□□ 0.02
CCDC78-216ENST00000544996 STAT5AP42229 794 aa15.2■□□□□ 0.02
CCDC78-216ENST00000544996 CALCOCO2Q13137 446 aa15.2■□□□□ 0.02
CCDC78-216ENST00000544996 SLC5A12Q1EHB4 618 aa15.2■□□□□ 0.02
CCDC78-216ENST00000544996 HP1BP3Q5SSJ5 553 aaPredicted RBP15.2■□□□□ 0.02
CCDC78-216ENST00000544996 KIAA1614Q5VZ46 1190 aa15.2■□□□□ 0.02
CCDC78-216ENST00000544996 IGDCC3Q8IVU1 814 aa15.2■□□□□ 0.02
CCDC78-216ENST00000544996 UNC5BQ8IZJ1 945 aa15.2■□□□□ 0.02
CCDC78-216ENST00000544996 C2CD4AQ8NCU7 369 aaPredicted RBP15.2■□□□□ 0.02
CCDC78-216ENST00000544996 LSM14AQ8ND56 463 aaKnown RBP15.2■□□□□ 0.02
CCDC78-216ENST00000544996 OR2L8Q8NGY9 312 aa15.2■□□□□ 0.02
CCDC78-216ENST00000544996 N4BP2L2Q92802 583 aaPredicted RBP15.2■□□□□ 0.02
CCDC78-216ENST00000544996 ZNF501Q96CX3 271 aaPredicted RBP15.2■□□□□ 0.02
CCDC78-216ENST00000544996 CERS2Q96G23 380 aa15.2■□□□□ 0.02
CCDC78-216ENST00000544996 CFAP36Q96G28 342 aa15.2■□□□□ 0.02
CCDC78-216ENST00000544996 TCTN2Q96GX1 697 aa15.2■□□□□ 0.02
CCDC78-216ENST00000544996 KLHL25Q9H0H3 589 aa15.2■□□□□ 0.02
CCDC78-216ENST00000544996 GALPQ9UBC7 116 aa15.2■□□□□ 0.02
CCDC78-216ENST00000544996 CIDEBQ9UHD4 219 aa15.2■□□□□ 0.02
CCDC78-216ENST00000544996 TSR3Q9UJK0 312 aaKnown RBP15.2■□□□□ 0.02
CCDC78-216ENST00000544996 SERTAD3Q9UJW9 196 aa15.2■□□□□ 0.02
CCDC78-216ENST00000544996 CHMP2BQ9UQN3 213 aa15.2■□□□□ 0.02
CCDC78-216ENST00000544996 SNX24Q9Y343 169 aa15.2■□□□□ 0.02
CCDC78-216ENST00000544996 PIKFYVEQ9Y2I7 2098 aa15.2■□□□□ 0.02
CCDC78-216ENST00000544996 AHCTF1Q8WYP5 2266 aa15.19■□□□□ 0.02
CCDC78-216ENST00000544996 LOC101059948A0A1B0GTJ6 334 aa15.19■□□□□ 0.02
CCDC78-216ENST00000544996 ZNF891A8MT65 544 aaPredicted RBP15.19■□□□□ 0.02
CCDC78-216ENST00000544996 TMEM150CB9EJG8 249 aa15.19■□□□□ 0.02
CCDC78-216ENST00000544996 ATXN7O15265 892 aaPredicted RBP15.19■□□□□ 0.02
CCDC78-216ENST00000544996 CPNE3O75131 537 aaKnown RBP15.19■□□□□ 0.02
CCDC78-216ENST00000544996 VPS26AO75436 327 aa15.19■□□□□ 0.02
CCDC78-216ENST00000544996 SCRG1O75711 98 aa15.19■□□□□ 0.02
CCDC78-216ENST00000544996 TIAF1O95411 115 aa15.19■□□□□ 0.02
CCDC78-216ENST00000544996 MATN4O95460 622 aa15.19■□□□□ 0.02
CCDC78-216ENST00000544996 NTRK1P04629 796 aa15.19■□□□□ 0.02
CCDC78-216ENST00000544996 RPL21P46778 160 aaKnown RBP15.19■□□□□ 0.02
CCDC78-216ENST00000544996 CARSP49589 748 aaKnown RBP15.19■□□□□ 0.02
CCDC78-216ENST00000544996 CLCN7P51798 805 aa15.19■□□□□ 0.02
CCDC78-216ENST00000544996 MPP1Q00013 466 aa15.19■□□□□ 0.02
CCDC78-216ENST00000544996 GRB7Q14451 532 aa15.19■□□□□ 0.02
CCDC78-216ENST00000544996 GBX1Q14549 363 aa15.19■□□□□ 0.02
CCDC78-216ENST00000544996 KLHL38Q2WGJ6 581 aa15.19■□□□□ 0.02
CCDC78-216ENST00000544996 SOWAHCQ53LP3 525 aaPredicted RBP15.19■□□□□ 0.02
CCDC78-216ENST00000544996 ACSBG2Q5FVE4 666 aa15.19■□□□□ 0.02
CCDC78-216ENST00000544996 UGT3A1Q6NUS8 523 aa15.19■□□□□ 0.02
CCDC78-216ENST00000544996 ZNF549Q6P9A3 640 aa15.19■□□□□ 0.02
CCDC78-216ENST00000544996 KIAA0408Q6ZU52 694 aa15.19■□□□□ 0.02
CCDC78-216ENST00000544996 NEK10Q6ZWH5 1172 aa15.19■□□□□ 0.02
CCDC78-216ENST00000544996 TRIM73Q86UV7 250 aa15.19■□□□□ 0.02
CCDC78-216ENST00000544996 C19orf47Q8N9M1 422 aaKnown RBP15.19■□□□□ 0.02
CCDC78-216ENST00000544996 INPP5DQ92835 1189 aa15.19■□□□□ 0.02
CCDC78-216ENST00000544996 RNF31Q96EP0 1072 aa15.19■□□□□ 0.02
CCDC78-216ENST00000544996 SLC45A3Q96JT2 553 aa15.19■□□□□ 0.02
CCDC78-216ENST00000544996 PWWP2AQ96N64 755 aa15.19■□□□□ 0.02
CCDC78-216ENST00000544996 ERP44Q9BS26 406 aa15.19■□□□□ 0.02
CCDC78-216ENST00000544996 MENTQ9BUN1 341 aa15.19■□□□□ 0.02
CCDC78-216ENST00000544996 FAM114A2Q9NRY5 505 aa15.19■□□□□ 0.02
CCDC78-216ENST00000544996 RUVBL2Q9Y230 463 aaKnown RBP15.19■□□□□ 0.02
CCDC78-216ENST00000544996 NFS1Q9Y697 457 aa15.19■□□□□ 0.02
CCDC78-216ENST00000544996 TEX264Q9Y6I9 313 aa15.19■□□□□ 0.02
CCDC78-216ENST00000544996 FAM208BQ5VWN6 2430 aa15.19■□□□□ 0.02
CCDC78-216ENST00000544996 PTPRQQ9UMZ3 2332 aa15.18■□□□□ 0.02
CCDC78-216ENST00000544996 SDK2Q58EX2 2172 aa15.18■□□□□ 0.02
CCDC78-216ENST00000544996 TK2O00142 265 aa15.18■□□□□ 0.02
CCDC78-216ENST00000544996 CATP04040 527 aaKnown RBP15.18■□□□□ 0.02
CCDC78-216ENST00000544996 ITGB2P05107 769 aa15.18■□□□□ 0.02
CCDC78-216ENST00000544996 F7P08709 466 aaPredicted RBP15.18■□□□□ 0.02
CCDC78-216ENST00000544996 ENO3P13929 434 aaPredicted RBP15.18■□□□□ 0.02
CCDC78-216ENST00000544996 WT1P19544 449 aaPredicted RBP15.18■□□□□ 0.02
CCDC78-216ENST00000544996 DLSTP36957 453 aa15.18■□□□□ 0.02
CCDC78-216ENST00000544996 BDKRB1P46663 353 aa15.18■□□□□ 0.02
CCDC78-216ENST00000544996 MC1RQ01726 317 aa15.18■□□□□ 0.02
CCDC78-216ENST00000544996 C2orf54Q08AI8 447 aa15.18■□□□□ 0.02
CCDC78-216ENST00000544996 PDIA2Q13087 525 aaKnown RBP15.18■□□□□ 0.02
CCDC78-216ENST00000544996 SF1Q15637 639 aaKnown RBP15.18■□□□□ 0.02
Retrieved 100 of 20,778 RNA–protein pairs in 52.2 ms