RNA–Protein interactions for RNA: ENST00000544429.5

DDX55-211, Transcript of DEAD-box helicase 55, humanhuman

TSL 4

Gene DDX55, Length 574 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
DDX55-211ENST00000544429 TDRKHQ9Y2W6 561 aaKnown RBP18.53■□□□□ 0.56
DDX55-211ENST00000544429 PCDHGA3Q9Y5H0 932 aa18.53■□□□□ 0.56
DDX55-211ENST00000544429 AHCTF1Q8WYP5 2266 aa18.53■□□□□ 0.56
DDX55-211ENST00000544429 ANKRD11Q6UB99 2663 aaPredicted RBP18.52■□□□□ 0.56
DDX55-211ENST00000544429 ZFHX4Q86UP3 3567 aa18.52■□□□□ 0.56
DDX55-211ENST00000544429 ARHGEF33A8MVX0 844 aa18.52■□□□□ 0.56
DDX55-211ENST00000544429 MYO1CO00159 1063 aa18.52■□□□□ 0.56
DDX55-211ENST00000544429 RASGRF2O14827 1237 aa18.52■□□□□ 0.56
DDX55-211ENST00000544429 NVLO15381 856 aaKnown RBP18.52■□□□□ 0.56
DDX55-211ENST00000544429 KDM1AO60341 852 aa18.52■□□□□ 0.56
DDX55-211ENST00000544429 WISP3O95389 354 aaPredicted RBP18.52■□□□□ 0.56
DDX55-211ENST00000544429 CHRM5P08912 532 aaPredicted RBP18.52■□□□□ 0.56
DDX55-211ENST00000544429 JMJD7P0C870 316 aa18.52■□□□□ 0.56
DDX55-211ENST00000544429 ERGP11308 486 aa18.52■□□□□ 0.56
DDX55-211ENST00000544429 NELFEP18615 380 aaKnown RBP18.52■□□□□ 0.56
DDX55-211ENST00000544429 PRDX3P30048 256 aaKnown RBP18.52■□□□□ 0.56
DDX55-211ENST00000544429 PEBP1P30086 187 aaKnown RBP18.52■□□□□ 0.56
DDX55-211ENST00000544429 PPM1FP49593 454 aaPredicted RBP18.52■□□□□ 0.56
DDX55-211ENST00000544429 MC2RQ01718 297 aa18.52■□□□□ 0.56
DDX55-211ENST00000544429 DNTTIP2Q5QJE6 756 aaKnown RBP18.52■□□□□ 0.56
DDX55-211ENST00000544429 CACHD1Q5VU97 1274 aa18.52■□□□□ 0.56
DDX55-211ENST00000544429 LRRC8EQ6NSJ5 796 aa18.52■□□□□ 0.56
DDX55-211ENST00000544429 KMT5CQ86Y97 462 aa18.52■□□□□ 0.56
DDX55-211ENST00000544429 EIF1ADQ8N9N8 165 aaKnown RBP18.52■□□□□ 0.56
DDX55-211ENST00000544429 EEF1AKMT1Q8WVE0 214 aa18.52■□□□□ 0.56
DDX55-211ENST00000544429 VPS39Q96JC1 886 aa18.52■□□□□ 0.56
DDX55-211ENST00000544429 FOPNLQ96NB1 174 aa18.52■□□□□ 0.56
DDX55-211ENST00000544429 CDC42EP4Q9H3Q1 356 aaKnown RBP18.52■□□□□ 0.56
DDX55-211ENST00000544429 FBXO8Q9NRD0 319 aa18.52■□□□□ 0.56
DDX55-211ENST00000544429 AKAP7Q9P0M2 348 aaPredicted RBP18.52■□□□□ 0.56
DDX55-211ENST00000544429 PISDQ9UG56 409 aa18.52■□□□□ 0.56
DDX55-211ENST00000544429 SDK2Q58EX2 2172 aa18.52■□□□□ 0.56
DDX55-211ENST00000544429 PCM1Q15154 2024 aa18.52■□□□□ 0.55
DDX55-211ENST00000544429 URB1O60287 2271 aaKnown RBP18.52■□□□□ 0.55
DDX55-211ENST00000544429 C9orf172C9J069 976 aa18.51■□□□□ 0.55
DDX55-211ENST00000544429 TLX3O43711 291 aaPredicted RBP18.51■□□□□ 0.55
DDX55-211ENST00000544429 PRICKLE3O43900 615 aaPredicted RBP18.51■□□□□ 0.55
DDX55-211ENST00000544429 RHOXF2BP0C7M4 288 aa18.51■□□□□ 0.55
DDX55-211ENST00000544429 MCM3P25205 808 aa18.51■□□□□ 0.55
DDX55-211ENST00000544429 GP5P40197 560 aa18.51■□□□□ 0.55
DDX55-211ENST00000544429 BDKRB1P46663 353 aa18.51■□□□□ 0.55
DDX55-211ENST00000544429 PGGT1BP53609 377 aa18.51■□□□□ 0.55
DDX55-211ENST00000544429 PRKAA1Q13131 559 aa18.51■□□□□ 0.55
DDX55-211ENST00000544429 NAB1Q13506 487 aa18.51■□□□□ 0.55
DDX55-211ENST00000544429 TMEM207Q6UWW9 146 aa18.51■□□□□ 0.55
DDX55-211ENST00000544429 PIWIL4Q7Z3Z4 852 aaKnown RBP18.51■□□□□ 0.55
DDX55-211ENST00000544429 GPATCH11Q8N954 259 aa18.51■□□□□ 0.55
DDX55-211ENST00000544429 OR2L8Q8NGY9 312 aa18.51■□□□□ 0.55
DDX55-211ENST00000544429 MAGEC3Q8TD91 643 aa18.51■□□□□ 0.55
DDX55-211ENST00000544429 SKA2Q8WVK7 121 aaPredicted RBP18.51■□□□□ 0.55
DDX55-211ENST00000544429 PDLIM5Q96HC4 596 aaKnown RBP18.51■□□□□ 0.55
DDX55-211ENST00000544429 PPM1MQ96MI6 270 aa18.51■□□□□ 0.55
DDX55-211ENST00000544429 OR2A14Q96R47 310 aa18.51■□□□□ 0.55
DDX55-211ENST00000544429 GPR22Q99680 433 aa18.51■□□□□ 0.55
DDX55-211ENST00000544429 RBBP8Q99708 897 aa18.51■□□□□ 0.55
DDX55-211ENST00000544429 RHOXF2Q9BQY4 288 aa18.51■□□□□ 0.55
DDX55-211ENST00000544429 DDA1Q9BW61 102 aa18.51■□□□□ 0.55
DDX55-211ENST00000544429 C1GALT1Q9NS00 363 aa18.51■□□□□ 0.55
DDX55-211ENST00000544429 THSD1Q9NS62 852 aa18.51■□□□□ 0.55
DDX55-211ENST00000544429 SPHK1Q9NYA1 384 aa18.51■□□□□ 0.55
DDX55-211ENST00000544429 ACTR10Q9NZ32 417 aa18.51■□□□□ 0.55
DDX55-211ENST00000544429 NFU1Q9UMS0 254 aa18.51■□□□□ 0.55
DDX55-211ENST00000544429 BTRCQ9Y297 605 aa18.51■□□□□ 0.55
DDX55-211ENST00000544429 ANKRD12Q6UB98 2062 aa18.51■□□□□ 0.55
DDX55-211ENST00000544429 CFAP47Q6ZTR5 3102 aa18.5■□□□□ 0.55
DDX55-211ENST00000544429 FAM95CA0A1B0GW59 222 aa18.5■□□□□ 0.55
DDX55-211ENST00000544429 PIPSLA2A3N6 862 aa18.5■□□□□ 0.55
DDX55-211ENST00000544429 KRT87PA6NCN2 255 aa18.5■□□□□ 0.55
DDX55-211ENST00000544429 EFCAB7A8K855 629 aa18.5■□□□□ 0.55
DDX55-211ENST00000544429 C2orf74A8MZ97 194 aa18.5■□□□□ 0.55
DDX55-211ENST00000544429 RASSF9O75901 435 aa18.5■□□□□ 0.55
DDX55-211ENST00000544429 RBMS1P29558 406 aaKnown RBP18.5■□□□□ 0.55
DDX55-211ENST00000544429 TAS2R39P59534 338 aa18.5■□□□□ 0.55
DDX55-211ENST00000544429 KIR2DS3Q14952 304 aa18.5■□□□□ 0.55
DDX55-211ENST00000544429 CYP2A13Q16696 494 aa18.5■□□□□ 0.55
DDX55-211ENST00000544429 ARMC6Q6NXE6 501 aa18.5■□□□□ 0.55
DDX55-211ENST00000544429 FOXR1Q6PIV2 292 aa18.5■□□□□ 0.55
DDX55-211ENST00000544429 SPESP1Q6UW49 350 aa18.5■□□□□ 0.55
DDX55-211ENST00000544429 CEP97Q8IW35 865 aa18.5■□□□□ 0.55
DDX55-211ENST00000544429 D2HGDHQ8N465 521 aa18.5■□□□□ 0.55
DDX55-211ENST00000544429 DLG3Q92796 817 aa18.5■□□□□ 0.55
DDX55-211ENST00000544429 FGF11Q92914 225 aa18.5■□□□□ 0.55
DDX55-211ENST00000544429 PMEPA1Q969W9 287 aa18.5■□□□□ 0.55
DDX55-211ENST00000544429 IL17FQ96PD4 163 aa18.5■□□□□ 0.55
DDX55-211ENST00000544429 TAAR9Q96RI9 348 aa18.5■□□□□ 0.55
DDX55-211ENST00000544429 RAB11FIP5Q9BXF6 653 aa18.5■□□□□ 0.55
DDX55-211ENST00000544429 TXLNGYQ9BZA5 131 aa18.5■□□□□ 0.55
DDX55-211ENST00000544429 POPDC3Q9HBV1 291 aa18.5■□□□□ 0.55
DDX55-211ENST00000544429 SPATA7Q9P0W8 599 aa18.5■□□□□ 0.55
DDX55-211ENST00000544429 MTO1Q9Y2Z2 717 aaKnown RBP18.5■□□□□ 0.55
DDX55-211ENST00000544429 LAMA5O15230 3695 aa18.5■□□□□ 0.55
DDX55-211ENST00000544429 EPG5Q9HCE0 2579 aa18.5■□□□□ 0.55
DDX55-211ENST00000544429 IQCJ-SCHIP1C9J366 451 aaPredicted RBP18.49■□□□□ 0.55
DDX55-211ENST00000544429 CATP04040 527 aaKnown RBP18.49■□□□□ 0.55
DDX55-211ENST00000544429 MSL3P1P0C860 447 aa18.49■□□□□ 0.55
DDX55-211ENST00000544429 UGT2B7P16662 529 aa18.49■□□□□ 0.55
DDX55-211ENST00000544429 ZNF37AP17032 561 aaPredicted RBP18.49■□□□□ 0.55
DDX55-211ENST00000544429 SLC5A2P31639 672 aa18.49■□□□□ 0.55
DDX55-211ENST00000544429 RGS4P49798 205 aa18.49■□□□□ 0.55
DDX55-211ENST00000544429 SEPHS1P49903 392 aa18.49■□□□□ 0.55
Retrieved 100 of 20,778 RNA–protein pairs in 44.6 ms