RNA–Protein interactions for RNA: ENST00000543939.5

COPS7A-218, Transcript of COP9 signalosome subunit 7A, humanhuman

TSL 3

Gene COPS7A, Length 1,728 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COPS7A-218ENST00000543939 SDR39U1Q9NRG7 319 aaPredicted RBP19.31■□□□□ 0.68
COPS7A-218ENST00000543939 CCDC167Q9P0B6 97 aa19.31■□□□□ 0.68
COPS7A-218ENST00000543939 CCL27Q9Y4X3 112 aa19.31■□□□□ 0.68
COPS7A-218ENST00000543939 GPR45Q9Y5Y3 372 aa19.31■□□□□ 0.68
COPS7A-218ENST00000543939 EYSQ5T1H1 3165 aa19.3■□□□□ 0.68
COPS7A-218ENST00000543939 KCNE1BA0A087WTH5 132 aa19.3■□□□□ 0.68
COPS7A-218ENST00000543939 A0A088AWK7 358 aa19.3■□□□□ 0.68
COPS7A-218ENST00000543939 MANBAO00462 879 aa19.3■□□□□ 0.68
COPS7A-218ENST00000543939 FFAR3O14843 346 aa19.3■□□□□ 0.68
COPS7A-218ENST00000543939 KMOO15229 486 aa19.3■□□□□ 0.68
COPS7A-218ENST00000543939 GPR42O15529 346 aa19.3■□□□□ 0.68
COPS7A-218ENST00000543939 IDO1P14902 403 aa19.3■□□□□ 0.68
COPS7A-218ENST00000543939 IMPA1P29218 277 aa19.3■□□□□ 0.68
COPS7A-218ENST00000543939 MAT2AP31153 395 aaKnown RBP19.3■□□□□ 0.68
COPS7A-218ENST00000543939 NUDT2P50583 147 aa19.3■□□□□ 0.68
COPS7A-218ENST00000543939 ERVK-8P63133 956 aa19.3■□□□□ 0.68
COPS7A-218ENST00000543939 KIF19Q2TAC6 998 aa19.3■□□□□ 0.68
COPS7A-218ENST00000543939 WASHC2DQ5SRD0 308 aa19.3■□□□□ 0.68
COPS7A-218ENST00000543939 PAOXQ6QHF9 649 aa19.3■□□□□ 0.68
COPS7A-218ENST00000543939 FAM124AQ86V42 546 aa19.3■□□□□ 0.68
COPS7A-218ENST00000543939 PACS2Q86VP3 889 aa19.3■□□□□ 0.68
COPS7A-218ENST00000543939 FUNDC1Q8IVP5 155 aa19.3■□□□□ 0.68
COPS7A-218ENST00000543939 ULK2Q8IYT8 1036 aa19.3■□□□□ 0.68
COPS7A-218ENST00000543939 MIER2Q8N344 545 aa19.3■□□□□ 0.68
COPS7A-218ENST00000543939 L3MBTL4Q8NA19 623 aa19.3■□□□□ 0.68
COPS7A-218ENST00000543939 KYQ8NBH2 561 aa19.3■□□□□ 0.68
COPS7A-218ENST00000543939 OR9I1Q8NGQ6 314 aa19.3■□□□□ 0.68
COPS7A-218ENST00000543939 OR56A3Q8NH54 315 aa19.3■□□□□ 0.68
COPS7A-218ENST00000543939 USP7Q93009 1102 aa19.3■□□□□ 0.68
COPS7A-218ENST00000543939 ZDHHC5Q9C0B5 715 aa19.3■□□□□ 0.68
COPS7A-218ENST00000543939 DENND2DQ9H6A0 471 aaPredicted RBP19.3■□□□□ 0.68
COPS7A-218ENST00000543939 AIG1Q9NVV5 245 aa19.3■□□□□ 0.68
COPS7A-218ENST00000543939 KLQ9UEF7 1012 aa19.3■□□□□ 0.68
COPS7A-218ENST00000543939 PRAMEF4O60810 478 aa19.29■□□□□ 0.68
COPS7A-218ENST00000543939 WFS1O76024 890 aa19.29■□□□□ 0.68
COPS7A-218ENST00000543939 SLC16A8O95907 504 aa19.29■□□□□ 0.68
COPS7A-218ENST00000543939 SNRPB2P08579 225 aaKnown RBP19.29■□□□□ 0.68
COPS7A-218ENST00000543939 NAE1Q13564 534 aa19.29■□□□□ 0.68
COPS7A-218ENST00000543939 ATP6AP1LQ52LC2 224 aa19.29■□□□□ 0.68
COPS7A-218ENST00000543939 PRAMEF9Q5VWM5 478 aa19.29■□□□□ 0.68
COPS7A-218ENST00000543939 TRIM46Q7Z4K8 759 aa19.29■□□□□ 0.68
COPS7A-218ENST00000543939 THOC6Q86W42 341 aaKnown RBP19.29■□□□□ 0.68
COPS7A-218ENST00000543939 DEFB107AQ8IZN7 70 aa19.29■□□□□ 0.68
COPS7A-218ENST00000543939 CLPTM1LQ96KA5 538 aa19.29■□□□□ 0.68
COPS7A-218ENST00000543939 HBEGFQ99075 208 aa19.29■□□□□ 0.68
COPS7A-218ENST00000543939 CDX2Q99626 313 aaPredicted RBP19.29■□□□□ 0.68
COPS7A-218ENST00000543939 EFCAB1Q9HAE3 211 aa19.29■□□□□ 0.68
COPS7A-218ENST00000543939 CD93Q9NPY3 652 aa19.29■□□□□ 0.68
COPS7A-218ENST00000543939 TM7SF3Q9NS93 570 aa19.29■□□□□ 0.68
COPS7A-218ENST00000543939 INTS7Q9NVH2 962 aaKnown RBP19.29■□□□□ 0.68
COPS7A-218ENST00000543939 BAIAP2L1Q9UHR4 511 aa19.29■□□□□ 0.68
COPS7A-218ENST00000543939 NDRG2Q9UN36 371 aaKnown RBP19.29■□□□□ 0.68
COPS7A-218ENST00000543939 TCRBV21S2A2A0A5A6 115 aa19.28■□□□□ 0.68
COPS7A-218ENST00000543939 LSM1O15116 133 aaKnown RBP19.28■□□□□ 0.68
COPS7A-218ENST00000543939 ULK1O75385 1050 aa19.28■□□□□ 0.68
COPS7A-218ENST00000543939 GABRG2P18507 467 aa19.28■□□□□ 0.68
COPS7A-218ENST00000543939 DIO3P55073 304 aa19.28■□□□□ 0.68
COPS7A-218ENST00000543939 GRIK2Q13002 908 aa19.28■□□□□ 0.68
COPS7A-218ENST00000543939 STX5Q13190 355 aa19.28■□□□□ 0.68
COPS7A-218ENST00000543939 ZRSR2Q15696 482 aaKnown RBP19.28■□□□□ 0.68
COPS7A-218ENST00000543939 LEXMQ3ZCV2 418 aa19.28■□□□□ 0.68
COPS7A-218ENST00000543939 METRNLQ641Q3 311 aa19.28■□□□□ 0.68
COPS7A-218ENST00000543939 UNC5DQ6UXZ4 953 aa19.28■□□□□ 0.68
COPS7A-218ENST00000543939 PDZD3Q86UT5 571 aa19.28■□□□□ 0.68
COPS7A-218ENST00000543939 MYLK4Q86YV6 388 aaPredicted RBP19.28■□□□□ 0.68
COPS7A-218ENST00000543939 DSELQ8IZU8 1212 aa19.28■□□□□ 0.68
COPS7A-218ENST00000543939 SLC25A23Q9BV35 468 aa19.28■□□□□ 0.68
COPS7A-218ENST00000543939 BRINP2Q9C0B6 783 aa19.28■□□□□ 0.68
COPS7A-218ENST00000543939 FARSBQ9NSD9 589 aaKnown RBP19.28■□□□□ 0.68
COPS7A-218ENST00000543939 CIDEBQ9UHD4 219 aa19.28■□□□□ 0.68
COPS7A-218ENST00000543939 KLHL33A6NCF5 533 aa19.28■□□□□ 0.68
COPS7A-218ENST00000543939 SLC28A1O00337 649 aa19.28■□□□□ 0.68
COPS7A-218ENST00000543939 MAN2B1O00754 1011 aa19.28■□□□□ 0.68
COPS7A-218ENST00000543939 SLC31A1O15431 190 aa19.28■□□□□ 0.68
COPS7A-218ENST00000543939 KRT6AP02538 564 aa19.28■□□□□ 0.68
COPS7A-218ENST00000543939 FUCA1P04066 466 aa19.28■□□□□ 0.68
COPS7A-218ENST00000543939 KRT6BP04259 564 aa19.28■□□□□ 0.68
COPS7A-218ENST00000543939 HNRNPH1P31943 449 aaKnown RBP19.28■□□□□ 0.68
COPS7A-218ENST00000543939 KRT6CP48668 564 aa19.28■□□□□ 0.68
COPS7A-218ENST00000543939 TPMTP51580 245 aa19.28■□□□□ 0.68
COPS7A-218ENST00000543939 MLF2Q15773 248 aaPredicted RBP19.28■□□□□ 0.68
COPS7A-218ENST00000543939 PGM2L1Q6PCE3 622 aa19.28■□□□□ 0.68
COPS7A-218ENST00000543939 C16orf89Q6UX73 402 aa19.28■□□□□ 0.68
COPS7A-218ENST00000543939 OR9A1PQ8NGU1 263 aa19.28■□□□□ 0.68
COPS7A-218ENST00000543939 MAGEB10Q96LZ2 347 aaPredicted RBP19.28■□□□□ 0.68
COPS7A-218ENST00000543939 APOOQ9BUR5 198 aa19.28■□□□□ 0.68
COPS7A-218ENST00000543939 FZD3Q9NPG1 666 aa19.28■□□□□ 0.68
COPS7A-218ENST00000543939 ZNHIT2Q9UHR6 403 aa19.28■□□□□ 0.68
COPS7A-218ENST00000543939 ZNF490Q9ULM2 529 aaPredicted RBP19.28■□□□□ 0.68
COPS7A-218ENST00000543939 SLC17A4Q9Y2C5 497 aa19.28■□□□□ 0.68
COPS7A-218ENST00000543939 FBP2O00757 339 aa19.27■□□□□ 0.68
COPS7A-218ENST00000543939 CEACAM5P06731 702 aa19.27■□□□□ 0.68
COPS7A-218ENST00000543939 ACSL1P33121 698 aa19.27■□□□□ 0.68
COPS7A-218ENST00000543939 EMX2Q04743 252 aa19.27■□□□□ 0.68
COPS7A-218ENST00000543939 PCDH1Q08174 1060 aa19.27■□□□□ 0.68
COPS7A-218ENST00000543939 RPS6KA2Q15349 733 aa19.27■□□□□ 0.68
COPS7A-218ENST00000543939 NR6A1Q15406 480 aa19.27■□□□□ 0.68
COPS7A-218ENST00000543939 CPSF6Q16630 551 aaKnown RBP eCLIP19.27■□□□□ 0.68
COPS7A-218ENST00000543939 TRIM69Q86WT6 500 aa19.27■□□□□ 0.68
COPS7A-218ENST00000543939 FNDC5Q8NAU1 212 aa19.27■□□□□ 0.68
Retrieved 100 of 20,778 RNA–protein pairs in 23 ms