RNA–Protein interactions for RNA: ENST00000543886.5

PTPRO-209, Transcript of protein tyrosine phosphatase, receptor type O, humanhuman

TSL 1 (best) BASIC

Gene PTPRO, Length 2,070 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTPRO-209ENST00000543886 ZCCHC2Q9C0B9 1178 aaKnown RBP16.64■□□□□ 0.25
PTPRO-209ENST00000543886 ATG10Q9H0Y0 220 aa16.64■□□□□ 0.25
PTPRO-209ENST00000543886 HPS4Q9NQG7 708 aa16.64■□□□□ 0.25
PTPRO-209ENST00000543886 ASIC5Q9NY37 505 aa16.64■□□□□ 0.25
PTPRO-209ENST00000543886 ACTR3BQ9P1U1 418 aa16.64■□□□□ 0.25
PTPRO-209ENST00000543886 KIAA1549LQ6ZVL6 1849 aa16.63■□□□□ 0.25
PTPRO-209ENST00000543886 KRT87PA6NCN2 255 aa16.63■□□□□ 0.25
PTPRO-209ENST00000543886 TBC1D3BA6NDS4 549 aa16.63■□□□□ 0.25
PTPRO-209ENST00000543886 AQP12BA6NM10 295 aa16.63■□□□□ 0.25
PTPRO-209ENST00000543886 TXNDC9O14530 226 aa16.63■□□□□ 0.25
PTPRO-209ENST00000543886 PSIP1O75475 530 aaKnown RBP16.63■□□□□ 0.25
PTPRO-209ENST00000543886 CATP04040 527 aaKnown RBP16.63■□□□□ 0.25
PTPRO-209ENST00000543886 ADRB3P13945 408 aa16.63■□□□□ 0.25
PTPRO-209ENST00000543886 PEX19P40855 299 aa16.63■□□□□ 0.25
PTPRO-209ENST00000543886 PREPP48147 710 aa16.63■□□□□ 0.25
PTPRO-209ENST00000543886 GSK3BP49841 420 aa16.63■□□□□ 0.25
PTPRO-209ENST00000543886 EEFSECP57772 596 aaKnown RBP16.63■□□□□ 0.25
PTPRO-209ENST00000543886 YBX1P67809 324 aaKnown RBP16.63■□□□□ 0.25
PTPRO-209ENST00000543886 MED21Q13503 144 aa16.63■□□□□ 0.25
PTPRO-209ENST00000543886 PTGR1Q14914 329 aa16.63■□□□□ 0.25
PTPRO-209ENST00000543886 LCN8Q6JVE9 175 aa16.63■□□□□ 0.25
PTPRO-209ENST00000543886 NEK5Q6P3R8 708 aa16.63■□□□□ 0.25
PTPRO-209ENST00000543886 TMEM220Q6QAJ8 160 aa16.63■□□□□ 0.25
PTPRO-209ENST00000543886 PRR23BQ6ZRT6 265 aa16.63■□□□□ 0.25
PTPRO-209ENST00000543886 IFNEQ86WN2 208 aa16.63■□□□□ 0.25
PTPRO-209ENST00000543886 GALNT13Q8IUC8 556 aa16.63■□□□□ 0.25
PTPRO-209ENST00000543886 AQP12AQ8IXF9 295 aa16.63■□□□□ 0.25
PTPRO-209ENST00000543886 KIAA2013Q8IYS2 634 aa16.63■□□□□ 0.25
PTPRO-209ENST00000543886 CPA6Q8N4T0 437 aa16.63■□□□□ 0.25
PTPRO-209ENST00000543886 SLCO4A1Q96BD0 722 aa16.63■□□□□ 0.25
PTPRO-209ENST00000543886 ACPTQ9BZG2 426 aa16.63■□□□□ 0.25
PTPRO-209ENST00000543886 LMAN2LQ9H0V9 348 aa16.63■□□□□ 0.25
PTPRO-209ENST00000543886 TRPV4Q9HBA0 871 aa16.63■□□□□ 0.25
PTPRO-209ENST00000543886 INTS7Q9NVH2 962 aaKnown RBP16.63■□□□□ 0.25
PTPRO-209ENST00000543886 SLAMF8Q9P0V8 285 aa16.63■□□□□ 0.25
PTPRO-209ENST00000543886 CNOT6Q9ULM6 557 aaKnown RBP16.63■□□□□ 0.25
PTPRO-209ENST00000543886 TCF20Q9UGU0 1960 aaKnown RBP16.63■□□□□ 0.25
PTPRO-209ENST00000543886 KCNE1BA0A087WTH5 132 aa16.63■□□□□ 0.25
PTPRO-209ENST00000543886 ARHGEF33A8MVX0 844 aa16.63■□□□□ 0.25
PTPRO-209ENST00000543886 ARNTLO00327 626 aa16.63■□□□□ 0.25
PTPRO-209ENST00000543886 LZTS3O60299 673 aaPredicted RBP16.63■□□□□ 0.25
PTPRO-209ENST00000543886 RSL1D1O76021 490 aaKnown RBP16.63■□□□□ 0.25
PTPRO-209ENST00000543886 RECQL5O94762 991 aaPredicted RBP16.63■□□□□ 0.25
PTPRO-209ENST00000543886 UBTFL6P0CB48 400 aaPredicted RBP16.63■□□□□ 0.25
PTPRO-209ENST00000543886 PBX2P40425 430 aa16.63■□□□□ 0.25
PTPRO-209ENST00000543886 MAPK9P45984 424 aa16.63■□□□□ 0.25
PTPRO-209ENST00000543886 DGKQP52824 942 aa16.63■□□□□ 0.25
PTPRO-209ENST00000543886 SHHQ15465 462 aa16.63■□□□□ 0.25
PTPRO-209ENST00000543886 IRAK1BP1Q5VVH5 260 aa16.63■□□□□ 0.25
PTPRO-209ENST00000543886 NANOGP8Q6NSW7 305 aa16.63■□□□□ 0.25
PTPRO-209ENST00000543886 DSG4Q86SJ6 1040 aa16.63■□□□□ 0.25
PTPRO-209ENST00000543886 SPPL2CQ8IUH8 684 aa16.63■□□□□ 0.25
PTPRO-209ENST00000543886 HID1Q8IV36 788 aa16.63■□□□□ 0.25
PTPRO-209ENST00000543886 RASGRP3Q8IV61 690 aa16.63■□□□□ 0.25
PTPRO-209ENST00000543886 SFTPA1Q8IWL2 248 aa16.63■□□□□ 0.25
PTPRO-209ENST00000543886 L3MBTL4Q8NA19 623 aa16.63■□□□□ 0.25
PTPRO-209ENST00000543886 GLB1L3Q8NCI6 653 aaPredicted RBP16.63■□□□□ 0.25
PTPRO-209ENST00000543886 ATL1Q8WXF7 558 aa16.63■□□□□ 0.25
PTPRO-209ENST00000543886 SUSD6Q92537 303 aa16.63■□□□□ 0.25
PTPRO-209ENST00000543886 GATA6Q92908 595 aa16.63■□□□□ 0.25
PTPRO-209ENST00000543886 FOPNLQ96NB1 174 aa16.63■□□□□ 0.25
PTPRO-209ENST00000543886 YIPF3Q9GZM5 350 aa16.63■□□□□ 0.25
PTPRO-209ENST00000543886 TMEM245Q9H330 911 aa16.63■□□□□ 0.25
PTPRO-209ENST00000543886 Q9H521 79 aa16.63■□□□□ 0.25
PTPRO-209ENST00000543886 IGFLR1Q9H665 355 aa16.63■□□□□ 0.25
PTPRO-209ENST00000543886 NANOGQ9H9S0 305 aa16.63■□□□□ 0.25
PTPRO-209ENST00000543886 SNX13Q9Y5W8 968 aa16.63■□□□□ 0.25
PTPRO-209ENST00000543886 PLK4O00444 970 aa16.62■□□□□ 0.25
PTPRO-209ENST00000543886 ARPC2O15144 300 aa16.62■□□□□ 0.25
PTPRO-209ENST00000543886 C6P13671 934 aa16.62■□□□□ 0.25
PTPRO-209ENST00000543886 FCARP24071 287 aa16.62■□□□□ 0.25
PTPRO-209ENST00000543886 HALP42357 657 aa16.62■□□□□ 0.25
PTPRO-209ENST00000543886 EEF1AKMT2Q5JPI9 291 aaKnown RBP16.62■□□□□ 0.25
PTPRO-209ENST00000543886 RAET1GQ6H3X3 334 aa16.62■□□□□ 0.25
PTPRO-209ENST00000543886 ZNF765Q7L2R6 523 aa16.62■□□□□ 0.25
PTPRO-209ENST00000543886 LRTOMTQ8WZ04 291 aa16.62■□□□□ 0.25
PTPRO-209ENST00000543886 EME1Q96AY2 570 aa16.62■□□□□ 0.25
PTPRO-209ENST00000543886 PPWD1Q96BP3 646 aaKnown RBP16.62■□□□□ 0.25
PTPRO-209ENST00000543886 TMEM74Q96NL1 305 aa16.62■□□□□ 0.25
PTPRO-209ENST00000543886 FAM129BQ96TA1 746 aa16.62■□□□□ 0.25
PTPRO-209ENST00000543886 EPHX3Q9H6B9 360 aa16.62■□□□□ 0.25
PTPRO-209ENST00000543886 SLC5A10A0PJK1 596 aa16.61■□□□□ 0.25
PTPRO-209ENST00000543886 DPPA5A6NC42 116 aa16.61■□□□□ 0.25
PTPRO-209ENST00000543886 AREL1O15033 823 aa16.61■□□□□ 0.25
PTPRO-209ENST00000543886 PSMA4P25789 261 aaKnown RBP16.61■□□□□ 0.25
PTPRO-209ENST00000543886 GPR1P46091 355 aa16.61■□□□□ 0.25
PTPRO-209ENST00000543886 PFN3P60673 137 aa16.61■□□□□ 0.25
PTPRO-209ENST00000543886 FOLH1Q04609 750 aa16.61■□□□□ 0.25
PTPRO-209ENST00000543886 AASDHQ4L235 1098 aaPredicted RBP16.61■□□□□ 0.25
PTPRO-209ENST00000543886 SLC44A4Q53GD3 710 aa16.61■□□□□ 0.25
PTPRO-209ENST00000543886 TANGO2Q6ICL3 276 aa16.61■□□□□ 0.25
PTPRO-209ENST00000543886 VITQ6UXI7 678 aa16.61■□□□□ 0.25
PTPRO-209ENST00000543886 TICAM1Q8IUC6 712 aa16.61■□□□□ 0.25
PTPRO-209ENST00000543886 GOLM1Q8NBJ4 401 aa16.61■□□□□ 0.25
PTPRO-209ENST00000543886 SLC13A3Q8WWT9 602 aa16.61■□□□□ 0.25
PTPRO-209ENST00000543886 CCDC138Q96M89 665 aa16.61■□□□□ 0.25
PTPRO-209ENST00000543886 CDCA3Q99618 268 aaPredicted RBP16.61■□□□□ 0.25
PTPRO-209ENST00000543886 SEMA6AQ9H2E6 1030 aa16.61■□□□□ 0.25
PTPRO-209ENST00000543886 DLGAP2Q9P1A6 1054 aa16.61■□□□□ 0.25
PTPRO-209ENST00000543886 ZFC3H1O60293 1989 aaKnown RBP16.61■□□□□ 0.25
Retrieved 100 of 20,778 RNA–protein pairs in 63.6 ms