RNA–Protein interactions for RNA: ENST00000543695.5

LDHA-222, Transcript of lactate dehydrogenase A, human

TSL 5

Gene LDHA, Length 554 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Ribosome .

RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
LDHA-222	ENST00000543695	PAGE3	Q5JUK9	113 aa		11	□□□□□ -0.65
LDHA-222	ENST00000543695	PRSS36	Q5K4E3	855 aa		11	□□□□□ -0.65
LDHA-222	ENST00000543695	HMBOX1	Q6NT76	420 aa		11	□□□□□ -0.65
LDHA-222	ENST00000543695	CYP2R1	Q6VVX0	501 aa		11	□□□□□ -0.65
LDHA-222	ENST00000543695	TRIM46	Q7Z4K8	759 aa		11	□□□□□ -0.65
LDHA-222	ENST00000543695	ADIPOR2	Q86V24	386 aa		11	□□□□□ -0.65
LDHA-222	ENST00000543695	PROSER1	Q86XN7	944 aa		11	□□□□□ -0.65
LDHA-222	ENST00000543695	AHI1	Q8N157	1196 aa		11	□□□□□ -0.65
LDHA-222	ENST00000543695	PACRGL	Q8N7B6	248 aa		11	□□□□□ -0.65
LDHA-222	ENST00000543695	GLB1L3	Q8NCI6	653 aa	Predicted RBP	11	□□□□□ -0.65
LDHA-222	ENST00000543695	HCAR2	Q8TDS4	363 aa		11	□□□□□ -0.65
LDHA-222	ENST00000543695	EME1	Q96AY2	570 aa		11	□□□□□ -0.65
LDHA-222	ENST00000543695	TCEAL4	Q96EI5	215 aa		11	□□□□□ -0.65
LDHA-222	ENST00000543695	SLC45A3	Q96JT2	553 aa		11	□□□□□ -0.65
LDHA-222	ENST00000543695	TEX37	Q96LM6	180 aa		11	□□□□□ -0.65
LDHA-222	ENST00000543695	MAGEB10	Q96LZ2	347 aa	Predicted RBP	11	□□□□□ -0.65
LDHA-222	ENST00000543695	HEPH	Q9BQS7	1158 aa		11	□□□□□ -0.65
LDHA-222	ENST00000543695	CENPK	Q9BS16	269 aa		11	□□□□□ -0.65
LDHA-222	ENST00000543695	OSBPL11	Q9BXB4	747 aa		11	□□□□□ -0.65
LDHA-222	ENST00000543695	ALG2	Q9H553	416 aa		11	□□□□□ -0.65
LDHA-222	ENST00000543695	ZFP14	Q9HCL3	533 aa		11	□□□□□ -0.65
LDHA-222	ENST00000543695	TSR3	Q9UJK0	312 aa	Known RBP	11	□□□□□ -0.65
LDHA-222	ENST00000543695	ERVW-1	Q9UQF0	538 aa		11	□□□□□ -0.65
LDHA-222	ENST00000543695	CCL27	Q9Y4X3	112 aa		11	□□□□□ -0.65
LDHA-222	ENST00000543695	POLR3H	Q9Y535	204 aa	Predicted RBP	11	□□□□□ -0.65
LDHA-222	ENST00000543695	PTPRZ1	P23471	2315 aa	Predicted RBP	11	□□□□□ -0.65
LDHA-222	ENST00000543695	DHRS12	A0PJE2	317 aa		10.99	□□□□□ -0.65
LDHA-222	ENST00000543695	SERTM1	A2A2V5	107 aa		10.99	□□□□□ -0.65
LDHA-222	ENST00000543695		A8MX80	341 aa		10.99	□□□□□ -0.65
LDHA-222	ENST00000543695		C9JVG2	144 aa		10.99	□□□□□ -0.65
LDHA-222	ENST00000543695	CFAP99	D6REC4	459 aa		10.99	□□□□□ -0.65
LDHA-222	ENST00000543695	MANBA	O00462	879 aa		10.99	□□□□□ -0.65
LDHA-222	ENST00000543695	SLC9A3R1	O14745	358 aa	Predicted RBP	10.99	□□□□□ -0.65
LDHA-222	ENST00000543695	ASL	P04424	464 aa		10.99	□□□□□ -0.65
LDHA-222	ENST00000543695	CEBPB	P17676	345 aa		10.99	□□□□□ -0.65
LDHA-222	ENST00000543695	POLR2E	P19388	210 aa	Known RBP	10.99	□□□□□ -0.65
LDHA-222	ENST00000543695	PSMA4	P25789	261 aa	Known RBP	10.99	□□□□□ -0.65
LDHA-222	ENST00000543695	VARS	P26640	1264 aa	Known RBP	10.99	□□□□□ -0.65
LDHA-222	ENST00000543695	CCR7	P32248	378 aa		10.99	□□□□□ -0.65
LDHA-222	ENST00000543695	HNMT	P50135	292 aa		10.99	□□□□□ -0.65
LDHA-222	ENST00000543695	CREB5	Q02930	508 aa		10.99	□□□□□ -0.65
LDHA-222	ENST00000543695	LIPE	Q05469	1076 aa		10.99	□□□□□ -0.65
LDHA-222	ENST00000543695	MLF2	Q15773	248 aa	Predicted RBP	10.99	□□□□□ -0.65
LDHA-222	ENST00000543695	TIGD2	Q4W5G0	525 aa		10.99	□□□□□ -0.65
LDHA-222	ENST00000543695	TANGO2	Q6ICL3	276 aa		10.99	□□□□□ -0.65
LDHA-222	ENST00000543695	HID1	Q8IV36	788 aa		10.99	□□□□□ -0.65
LDHA-222	ENST00000543695	RASGRP3	Q8IV61	690 aa		10.99	□□□□□ -0.65
LDHA-222	ENST00000543695	C1orf210	Q8IVY1	113 aa		10.99	□□□□□ -0.65
LDHA-222	ENST00000543695	ADGRG5	Q8IZF4	528 aa		10.99	□□□□□ -0.65
LDHA-222	ENST00000543695	ADGRG2	Q8IZP9	1017 aa		10.99	□□□□□ -0.65
LDHA-222	ENST00000543695	TRAM1L1	Q8N609	369 aa		10.99	□□□□□ -0.65
LDHA-222	ENST00000543695	CHST14	Q8NCH0	376 aa		10.99	□□□□□ -0.65
LDHA-222	ENST00000543695	PAPD5	Q8NDF8	572 aa	Known RBP	10.99	□□□□□ -0.65
LDHA-222	ENST00000543695	PJA1	Q8NG27	643 aa		10.99	□□□□□ -0.65
LDHA-222	ENST00000543695	OR2A12	Q8NGT7	310 aa		10.99	□□□□□ -0.65
LDHA-222	ENST00000543695	WFIKKN2	Q8TEU8	576 aa		10.99	□□□□□ -0.65
LDHA-222	ENST00000543695	CANT1	Q8WVQ1	401 aa		10.99	□□□□□ -0.65
LDHA-222	ENST00000543695	USP7	Q93009	1102 aa		10.99	□□□□□ -0.65
LDHA-222	ENST00000543695	VPS33A	Q96AX1	596 aa		10.99	□□□□□ -0.65
LDHA-222	ENST00000543695	ELSPBP1	Q96BH3	223 aa		10.99	□□□□□ -0.65
LDHA-222	ENST00000543695	LRIG1	Q96JA1	1093 aa		10.99	□□□□□ -0.65
LDHA-222	ENST00000543695	NELL2	Q99435	816 aa		10.99	□□□□□ -0.65
LDHA-222	ENST00000543695	ZBTB18	Q99592	522 aa		10.99	□□□□□ -0.65
LDHA-222	ENST00000543695	KCTD14	Q9BQ13	255 aa	Predicted RBP	10.99	□□□□□ -0.65
LDHA-222	ENST00000543695	SLC12A9	Q9BXP2	914 aa		10.99	□□□□□ -0.65
LDHA-222	ENST00000543695	OSBPL6	Q9BZF3	934 aa		10.99	□□□□□ -0.65
LDHA-222	ENST00000543695	FOXQ1	Q9C009	403 aa		10.99	□□□□□ -0.65
LDHA-222	ENST00000543695	ACTL8	Q9H568	366 aa		10.99	□□□□□ -0.65
LDHA-222	ENST00000543695	SLC32A1	Q9H598	525 aa		10.99	□□□□□ -0.65
LDHA-222	ENST00000543695	ZNF696	Q9H7X3	374 aa		10.99	□□□□□ -0.65
LDHA-222	ENST00000543695	COQ10B	Q9H8M1	238 aa		10.99	□□□□□ -0.65
LDHA-222	ENST00000543695	PARVB	Q9HBI1	364 aa		10.99	□□□□□ -0.65
LDHA-222	ENST00000543695	GMPR2	Q9P2T1	348 aa	Known RBP	10.99	□□□□□ -0.65
LDHA-222	ENST00000543695	SLCO3A1	Q9UIG8	710 aa		10.99	□□□□□ -0.65
LDHA-222	ENST00000543695	PADI4	Q9UM07	663 aa		10.99	□□□□□ -0.65
LDHA-222	ENST00000543695	AP3M1	Q9Y2T2	418 aa		10.99	□□□□□ -0.65
LDHA-222	ENST00000543695	BPTF	Q12830	3046 aa		10.99	□□□□□ -0.65
LDHA-222	ENST00000543695	ZFHX2	Q9C0A1	2572 aa	Predicted RBP	10.98	□□□□□ -0.65
LDHA-222	ENST00000543695	DOCK8	Q8NF50	2099 aa		10.98	□□□□□ -0.65
LDHA-222	ENST00000543695	TCRBV5S2	A0A599	114 aa		10.98	□□□□□ -0.65
LDHA-222	ENST00000543695	PABPN1L	A6NDY0	278 aa	Known RBP	10.98	□□□□□ -0.65
LDHA-222	ENST00000543695	FAM170B	A6NMN3	283 aa		10.98	□□□□□ -0.65
LDHA-222	ENST00000543695	UPK3BL1	B0FP48	263 aa		10.98	□□□□□ -0.65
LDHA-222	ENST00000543695	UPK3BL2	E5RIL1	263 aa		10.98	□□□□□ -0.65
LDHA-222	ENST00000543695	NPIPB8	E9PQR5	432 aa		10.98	□□□□□ -0.65
LDHA-222	ENST00000543695	QSOX1	O00391	747 aa		10.98	□□□□□ -0.65
LDHA-222	ENST00000543695	BNIP3L	O60238	219 aa		10.98	□□□□□ -0.65
LDHA-222	ENST00000543695	ULK1	O75385	1050 aa		10.98	□□□□□ -0.65
LDHA-222	ENST00000543695	TNFAIP8	O95379	198 aa		10.98	□□□□□ -0.65
LDHA-222	ENST00000543695	CLDN9	O95484	217 aa		10.98	□□□□□ -0.65
LDHA-222	ENST00000543695	KRT6A	P02538	564 aa		10.98	□□□□□ -0.65
LDHA-222	ENST00000543695	KRT6B	P04259	564 aa		10.98	□□□□□ -0.65
LDHA-222	ENST00000543695	SRPRA	P08240	638 aa	Known RBP	10.98	□□□□□ -0.65
LDHA-222	ENST00000543695	G6PD	P11413	515 aa		10.98	□□□□□ -0.65
LDHA-222	ENST00000543695	ATP1B2	P14415	290 aa	Predicted RBP	10.98	□□□□□ -0.65
LDHA-222	ENST00000543695	CYP2A7	P20853	494 aa		10.98	□□□□□ -0.65
LDHA-222	ENST00000543695	PAX7	P23759	505 aa		10.98	□□□□□ -0.65
LDHA-222	ENST00000543695	PRPH2	P23942	346 aa		10.98	□□□□□ -0.65
LDHA-222	ENST00000543695	NNMT	P40261	264 aa		10.98	□□□□□ -0.65
LDHA-222	ENST00000543695	GNPDA1	P46926	289 aa		10.98	□□□□□ -0.65

Retrieved 100 of 20,778 RNA–protein pairs in 31.7 ms