RNA–Protein interactions for RNA: ENST00000543184.5

PRAME-214, Transcript of preferentially expressed antigen in melanoma, humanhuman

APPRIS P2 TSL 1 (best) BASIC

Gene PRAME, Length 2,758 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PRAME-214ENST00000543184 CARD16Q5EG05 197 aa13.91□□□□□ -0.18
PRAME-214ENST00000543184 Q6ZPB1 254 aaPredicted RBP13.91□□□□□ -0.18
PRAME-214ENST00000543184 ZNF683Q8IZ20 524 aa13.91□□□□□ -0.18
PRAME-214ENST00000543184 ZNF548Q8NEK5 533 aaPredicted RBP13.91□□□□□ -0.18
PRAME-214ENST00000543184 LPCAT1Q8NF37 534 aa13.91□□□□□ -0.18
PRAME-214ENST00000543184 RORBQ92753 470 aa13.91□□□□□ -0.18
PRAME-214ENST00000543184 CNDP2Q96KP4 475 aaKnown RBP13.91□□□□□ -0.18
PRAME-214ENST00000543184 APOL5Q9BWW9 433 aa13.91□□□□□ -0.18
PRAME-214ENST00000543184 POLR1EQ9GZS1 481 aaKnown RBP13.91□□□□□ -0.18
PRAME-214ENST00000543184 NSUN3Q9H649 340 aaKnown RBP13.91□□□□□ -0.18
PRAME-214ENST00000543184 RNF167Q9H6Y7 350 aa13.91□□□□□ -0.18
PRAME-214ENST00000543184 ZIM2Q9NZV7 527 aa13.91□□□□□ -0.18
PRAME-214ENST00000543184 SCHIP1Q9P0W5 487 aaPredicted RBP13.91□□□□□ -0.18
PRAME-214ENST00000543184 OR7A17O14581 309 aa13.91□□□□□ -0.18
PRAME-214ENST00000543184 ANKRD28O15084 1053 aa13.91□□□□□ -0.18
PRAME-214ENST00000543184 VPS4BO75351 444 aa13.91□□□□□ -0.18
PRAME-214ENST00000543184 ZNF682O95780 498 aa13.91□□□□□ -0.18
PRAME-214ENST00000543184 CXCL10P02778 98 aa13.91□□□□□ -0.18
PRAME-214ENST00000543184 SPNP16150 400 aa13.91□□□□□ -0.18
PRAME-214ENST00000543184 EFNA1P20827 205 aaPredicted RBP13.91□□□□□ -0.18
PRAME-214ENST00000543184 TCEA1P23193 301 aaKnown RBP13.91□□□□□ -0.18
PRAME-214ENST00000543184 GTF2E2P29084 291 aaKnown RBP13.91□□□□□ -0.18
PRAME-214ENST00000543184 FAM189BP81408 668 aa13.91□□□□□ -0.18
PRAME-214ENST00000543184 PCBP1Q15365 356 aaKnown RBP eCLIP13.91□□□□□ -0.181e-11■■□□□ 11.5
PRAME-214ENST00000543184 VARS2Q5ST30 1063 aaKnown RBP13.91□□□□□ -0.18
PRAME-214ENST00000543184 MBOAT1Q6ZNC8 495 aa13.91□□□□□ -0.18
PRAME-214ENST00000543184 BEND5Q7L4P6 421 aa13.91□□□□□ -0.18
PRAME-214ENST00000543184 GOLGA7Q7Z5G4 137 aa13.91□□□□□ -0.18
PRAME-214ENST00000543184 LEMD2Q8NC56 503 aa13.91□□□□□ -0.18
PRAME-214ENST00000543184 MAGED4Q96JG8 741 aa13.91□□□□□ -0.18
PRAME-214ENST00000543184 PKMYT1Q99640 499 aa13.91□□□□□ -0.18
PRAME-214ENST00000543184 MUC13Q9H3R2 512 aa13.91□□□□□ -0.18
PRAME-214ENST00000543184 TRMT6Q9UJA5 497 aaKnown RBP13.91□□□□□ -0.18
PRAME-214ENST00000543184 INTS6Q9UL03 887 aaKnown RBP13.91□□□□□ -0.18
PRAME-214ENST00000543184 B3GNT3Q9Y2A9 372 aa13.91□□□□□ -0.18
PRAME-214ENST00000543184 PCDHGA10Q9Y5H3 936 aa13.91□□□□□ -0.18
PRAME-214ENST00000543184 MYO16Q9Y6X6 1858 aa13.91□□□□□ -0.18
PRAME-214ENST00000543184 E5RI56 91 aa13.9□□□□□ -0.18
PRAME-214ENST00000543184 TULP3O75386 442 aa13.9□□□□□ -0.18
PRAME-214ENST00000543184 LRATO95237 230 aa13.9□□□□□ -0.18
PRAME-214ENST00000543184 UGT2B4P06133 528 aa13.9□□□□□ -0.18
PRAME-214ENST00000543184 MC4RP32245 332 aa13.9□□□□□ -0.18
PRAME-214ENST00000543184 CA5AP35218 305 aa13.9□□□□□ -0.18
PRAME-214ENST00000543184 CA8P35219 290 aa13.9□□□□□ -0.18
PRAME-214ENST00000543184 MAPKAPK3Q16644 382 aa13.9□□□□□ -0.18
PRAME-214ENST00000543184 CCDC92Q53HC0 331 aaPredicted RBP13.9□□□□□ -0.18
PRAME-214ENST00000543184 COLEC12Q5KU26 742 aa13.9□□□□□ -0.18
PRAME-214ENST00000543184 ZNF691Q5VV52 312 aa13.9□□□□□ -0.18
PRAME-214ENST00000543184 CES5AQ6NT32 575 aa13.9□□□□□ -0.18
PRAME-214ENST00000543184 ATAD1Q8NBU5 361 aa13.9□□□□□ -0.18
PRAME-214ENST00000543184 FAM83FQ8NEG4 500 aaPredicted RBP13.9□□□□□ -0.18
PRAME-214ENST00000543184 CD200R1Q8TD46 325 aa13.9□□□□□ -0.18
PRAME-214ENST00000543184 SLC13A3Q8WWT9 602 aa13.9□□□□□ -0.18
PRAME-214ENST00000543184 GTF2H4Q92759 462 aa13.9□□□□□ -0.18
PRAME-214ENST00000543184 YME1L1Q96TA2 773 aa13.9□□□□□ -0.18
PRAME-214ENST00000543184 SLX1AQ9BQ83 275 aa13.9□□□□□ -0.18
PRAME-214ENST00000543184 INPP5KQ9BT40 448 aa13.9□□□□□ -0.18
PRAME-214ENST00000543184 AKAP8LQ9ULX6 646 aaKnown RBP eCLIP13.9□□□□□ -0.182e-39■■■■■ 28.3
PRAME-214ENST00000543184 ABCG2Q9UNQ0 655 aa13.9□□□□□ -0.18
PRAME-214ENST00000543184 ELOVL7A1L3X0 281 aa13.9□□□□□ -0.18
PRAME-214ENST00000543184 TBX1O43435 398 aa13.9□□□□□ -0.18
PRAME-214ENST00000543184 ZNF623O75123 536 aa13.9□□□□□ -0.18
PRAME-214ENST00000543184 RHOQP17081 205 aa13.9□□□□□ -0.18
PRAME-214ENST00000543184 NEK2P51955 445 aa13.9□□□□□ -0.18
PRAME-214ENST00000543184 MVKQ03426 396 aa13.9□□□□□ -0.18
PRAME-214ENST00000543184 SLC14A1Q13336 389 aa13.9□□□□□ -0.18
PRAME-214ENST00000543184 CNKSR3Q6P9H4 555 aa13.9□□□□□ -0.18
PRAME-214ENST00000543184 LIX1Q8N485 282 aa13.9□□□□□ -0.18
PRAME-214ENST00000543184 ARL10Q8N8L6 244 aa13.9□□□□□ -0.18
PRAME-214ENST00000543184 SERPINB11Q96P15 392 aa13.9□□□□□ -0.18
PRAME-214ENST00000543184 FAM193BQ96PV7 902 aaPredicted RBP13.9□□□□□ -0.18
PRAME-214ENST00000543184 BTBD2Q9BX70 525 aa13.9□□□□□ -0.18
PRAME-214ENST00000543184 UGT2B28Q9BY64 529 aa13.9□□□□□ -0.18
PRAME-214ENST00000543184 IPPKQ9H8X2 491 aa13.9□□□□□ -0.18
PRAME-214ENST00000543184 RMI1Q9H9A7 625 aa13.9□□□□□ -0.18
PRAME-214ENST00000543184 ZBTB20Q9HC78 741 aaPredicted RBP13.9□□□□□ -0.18
PRAME-214ENST00000543184 C8orf4Q9NR00 106 aa13.9□□□□□ -0.18
PRAME-214ENST00000543184 TMEM161AQ9NX61 479 aa13.9□□□□□ -0.18
PRAME-214ENST00000543184 MUC3AQ02505 3323 aa13.9□□□□□ -0.18
PRAME-214ENST00000543184 SLC12A8A0AV02 714 aa13.89□□□□□ -0.19
PRAME-214ENST00000543184 KRT87PA6NCN2 255 aa13.89□□□□□ -0.19
PRAME-214ENST00000543184 SEC24AO95486 1093 aa13.89□□□□□ -0.19
PRAME-214ENST00000543184 PRAMEF12O95522 483 aa13.89□□□□□ -0.19
PRAME-214ENST00000543184 FGBP02675 491 aa13.89□□□□□ -0.19
PRAME-214ENST00000543184 RPLP2P05387 115 aaKnown RBP13.89□□□□□ -0.19
PRAME-214ENST00000543184 KCNQ1P51787 676 aa13.89□□□□□ -0.19
PRAME-214ENST00000543184 ACVR1Q04771 509 aa13.89□□□□□ -0.19
PRAME-214ENST00000543184 SERINC3Q13530 473 aa13.89□□□□□ -0.19
PRAME-214ENST00000543184 GBX1Q14549 363 aa13.89□□□□□ -0.19
PRAME-214ENST00000543184 SUSD1Q6UWL2 747 aa13.89□□□□□ -0.19
PRAME-214ENST00000543184 FRA10AC1Q70Z53 315 aa13.89□□□□□ -0.19
PRAME-214ENST00000543184 SPATC1Q76KD6 591 aa13.89□□□□□ -0.19
PRAME-214ENST00000543184 ZNF540Q8NDQ6 660 aa13.89□□□□□ -0.19
PRAME-214ENST00000543184 RBM4BQ9BQ04 359 aaKnown RBP13.89□□□□□ -0.19
PRAME-214ENST00000543184 RBM4Q9BWF3 364 aaKnown RBP13.89□□□□□ -0.19
PRAME-214ENST00000543184 TMEM248Q9NWD8 314 aa13.89□□□□□ -0.19
PRAME-214ENST00000543184 PKP3Q9Y446 797 aa13.89□□□□□ -0.19
PRAME-214ENST00000543184 TRIOO75962 3097 aa13.89□□□□□ -0.19
PRAME-214ENST00000543184 PATJQ8NI35 1801 aa13.89□□□□□ -0.19
PRAME-214ENST00000543184 USP34Q70CQ2 3546 aa13.89□□□□□ -0.19
Retrieved 100 of 20,778 RNA–protein pairs in 36.1 ms