RNA–Protein interactions for RNA: ENST00000542813.2

SFSWAP-211, Transcript of splicing factor SWAP, humanhuman

TSL 3

Gene SFSWAP, Length 373 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SFSWAP-211ENST00000542813 LAMB3Q13751 1172 aa3.81□□□□□ -1.8
SFSWAP-211ENST00000542813 GAMTQ14353 236 aa3.81□□□□□ -1.8
SFSWAP-211ENST00000542813 MAPK11Q15759 364 aa3.81□□□□□ -1.8
SFSWAP-211ENST00000542813 DDX59Q5T1V6 619 aaKnown RBP eCLIP3.81□□□□□ -1.8
SFSWAP-211ENST00000542813 DUS1LQ6P1R4 473 aaKnown RBP3.81□□□□□ -1.8
SFSWAP-211ENST00000542813 KDELC1Q6UW63 502 aa3.81□□□□□ -1.8
SFSWAP-211ENST00000542813 MEX3BQ6ZN04 569 aaKnown RBP3.81□□□□□ -1.8
SFSWAP-211ENST00000542813 RBM43Q6ZSC3 357 aaKnown RBP3.81□□□□□ -1.8
SFSWAP-211ENST00000542813 ZNF534Q76KX8 674 aa3.81□□□□□ -1.8
SFSWAP-211ENST00000542813 ARMC9Q7Z3E5 817 aa3.81□□□□□ -1.8
SFSWAP-211ENST00000542813 PRSS42Q7Z5A4 293 aa3.81□□□□□ -1.8
SFSWAP-211ENST00000542813 AMIGO2Q86SJ2 522 aa3.81□□□□□ -1.8
SFSWAP-211ENST00000542813 PHLDB2Q86SQ0 1253 aa3.81□□□□□ -1.8
SFSWAP-211ENST00000542813 PATL1Q86TB9 770 aaKnown RBP3.81□□□□□ -1.8
SFSWAP-211ENST00000542813 BEST3Q8N1M1 668 aa3.81□□□□□ -1.8
SFSWAP-211ENST00000542813 TEX45Q8NA69 505 aa3.81□□□□□ -1.8
SFSWAP-211ENST00000542813 SLC38A9Q8NBW4 561 aa3.81□□□□□ -1.8
SFSWAP-211ENST00000542813 RNASE8Q8TDE3 154 aaKnown RBP3.81□□□□□ -1.8
SFSWAP-211ENST00000542813 SLC35F5Q8WV83 523 aa3.81□□□□□ -1.8
SFSWAP-211ENST00000542813 SLC9A6Q92581 669 aa3.81□□□□□ -1.8
SFSWAP-211ENST00000542813 SLC25A28Q96A46 364 aa3.81□□□□□ -1.8
SFSWAP-211ENST00000542813 AP2M1Q96CW1 435 aa3.81□□□□□ -1.8
SFSWAP-211ENST00000542813 STAMBPL1Q96FJ0 436 aa3.81□□□□□ -1.8
SFSWAP-211ENST00000542813 PANX3Q96QZ0 392 aa3.81□□□□□ -1.8
SFSWAP-211ENST00000542813 SLC22A12Q96S37 553 aa3.81□□□□□ -1.8
SFSWAP-211ENST00000542813 C16orf70Q9BSU1 422 aa3.81□□□□□ -1.8
SFSWAP-211ENST00000542813 DPAGT1Q9H3H5 408 aa3.81□□□□□ -1.8
SFSWAP-211ENST00000542813 WDR26Q9H7D7 661 aa3.81□□□□□ -1.8
SFSWAP-211ENST00000542813 MMRN2Q9H8L6 949 aa3.81□□□□□ -1.8
SFSWAP-211ENST00000542813 SLCO1C1Q9NYB5 712 aa3.81□□□□□ -1.8
SFSWAP-211ENST00000542813 FASTKD2Q9NYY8 710 aaKnown RBP eCLIP3.81□□□□□ -1.8
SFSWAP-211ENST00000542813 OR6C3Q9NZP0 311 aa3.81□□□□□ -1.8
SFSWAP-211ENST00000542813 KLHL13Q9P2N7 655 aa3.81□□□□□ -1.8
SFSWAP-211ENST00000542813 RHCGQ9UBD6 479 aa3.81□□□□□ -1.8
SFSWAP-211ENST00000542813 TRMT6Q9UJA5 497 aaKnown RBP3.81□□□□□ -1.8
SFSWAP-211ENST00000542813 ADAM21Q9UKJ8 722 aa3.81□□□□□ -1.8
SFSWAP-211ENST00000542813 AGO2Q9UKV8 859 aaKnown RBP3.81□□□□□ -1.8
SFSWAP-211ENST00000542813 ABT1Q9ULW3 272 aaKnown RBP3.81□□□□□ -1.8
SFSWAP-211ENST00000542813 ITM2BQ9Y287 266 aa3.81□□□□□ -1.8
SFSWAP-211ENST00000542813 GRIP1Q9Y3R0 1128 aa3.81□□□□□ -1.8
SFSWAP-211ENST00000542813 TET3O43151 1660 aa3.81□□□□□ -1.8
SFSWAP-211ENST00000542813 MBD5Q9P267 1494 aa3.8□□□□□ -1.8
SFSWAP-211ENST00000542813 MYOM3Q5VTT5 1437 aa3.8□□□□□ -1.8
SFSWAP-211ENST00000542813 CASKIN1Q8WXD9 1431 aa3.8□□□□□ -1.8
SFSWAP-211ENST00000542813 NPHP3Q7Z494 1330 aa3.8□□□□□ -1.8
SFSWAP-211ENST00000542813 TRBV2A0A0J9YWF9 115 aa3.8□□□□□ -1.8
SFSWAP-211ENST00000542813 MAGEA13PA6NCF6 341 aa3.8□□□□□ -1.8
SFSWAP-211ENST00000542813 FAM90A10PA6NDY2 464 aa3.8□□□□□ -1.8
SFSWAP-211ENST00000542813 TMEM221A6NGB7 291 aa3.8□□□□□ -1.8
SFSWAP-211ENST00000542813 B4DGG1 531 aa3.8□□□□□ -1.8
SFSWAP-211ENST00000542813 H0YGN5 161 aa3.8□□□□□ -1.8
SFSWAP-211ENST00000542813 CACNB4O00305 520 aaPredicted RBP3.8□□□□□ -1.8
SFSWAP-211ENST00000542813 HS3ST1O14792 307 aa3.8□□□□□ -1.8
SFSWAP-211ENST00000542813 RASGRF2O14827 1237 aa3.8□□□□□ -1.8
SFSWAP-211ENST00000542813 LUC7L3O95232 432 aaKnown RBP3.8□□□□□ -1.8
SFSWAP-211ENST00000542813 MT-ATP6P00846 226 aa3.8□□□□□ -1.8
SFSWAP-211ENST00000542813 TGFAP01135 160 aa3.8□□□□□ -1.8
SFSWAP-211ENST00000542813 SERPING1P05155 500 aa3.8□□□□□ -1.8
SFSWAP-211ENST00000542813 SLC6A6P31641 620 aa3.8□□□□□ -1.8
SFSWAP-211ENST00000542813 APOBEC1P41238 236 aaKnown RBP3.8□□□□□ -1.8
SFSWAP-211ENST00000542813 LHX1P48742 406 aa3.8□□□□□ -1.8
SFSWAP-211ENST00000542813 SLC9A3P48764 834 aa3.8□□□□□ -1.8
SFSWAP-211ENST00000542813 RGS7P49802 495 aa3.8□□□□□ -1.8
SFSWAP-211ENST00000542813 DLK1P80370 383 aa3.8□□□□□ -1.8
SFSWAP-211ENST00000542813 DGCR2P98153 550 aa3.8□□□□□ -1.8
SFSWAP-211ENST00000542813 AKAP17AQ02040 695 aaKnown RBP3.8□□□□□ -1.8
SFSWAP-211ENST00000542813 GAD2Q05329 585 aa3.8□□□□□ -1.8
SFSWAP-211ENST00000542813 ST3GAL1Q11201 340 aa3.8□□□□□ -1.8
SFSWAP-211ENST00000542813 GAGE2BQ13066 116 aa3.8□□□□□ -1.8
SFSWAP-211ENST00000542813 TUBA3CQ13748 450 aa3.8□□□□□ -1.8
SFSWAP-211ENST00000542813 TRADDQ15628 312 aa3.8□□□□□ -1.8
SFSWAP-211ENST00000542813 DECR1Q16698 335 aa3.8□□□□□ -1.8
SFSWAP-211ENST00000542813 SLC9C1Q4G0N8 1177 aa3.8□□□□□ -1.8
SFSWAP-211ENST00000542813 GAGE2EQ4V326 116 aa3.8□□□□□ -1.8
SFSWAP-211ENST00000542813 EPHA10Q5JZY3 1008 aa3.8□□□□□ -1.8
SFSWAP-211ENST00000542813 PRAMEF17Q5VTA0 474 aa3.8□□□□□ -1.8
SFSWAP-211ENST00000542813 GAGE2AQ6NT46 116 aa3.8□□□□□ -1.8
SFSWAP-211ENST00000542813 MFSD12Q6NUT3 480 aa3.8□□□□□ -1.8
SFSWAP-211ENST00000542813 NEK5Q6P3R8 708 aa3.8□□□□□ -1.8
SFSWAP-211ENST00000542813 CYB5D1Q6P9G0 228 aa3.8□□□□□ -1.8
SFSWAP-211ENST00000542813 TUBA3EQ6PEY2 450 aa3.8□□□□□ -1.8
SFSWAP-211ENST00000542813 B3GNT6Q6ZMB0 384 aa3.8□□□□□ -1.8
SFSWAP-211ENST00000542813 ZNF813Q6ZN06 617 aa3.8□□□□□ -1.8
SFSWAP-211ENST00000542813 C1orf186Q6ZWK4 172 aa3.8□□□□□ -1.8
SFSWAP-211ENST00000542813 MARK2Q7KZI7 788 aaKnown RBP3.8□□□□□ -1.8
SFSWAP-211ENST00000542813 SHFQ7M4L6 423 aa3.8□□□□□ -1.8
SFSWAP-211ENST00000542813 ZER1Q7Z7L7 766 aa3.8□□□□□ -1.8
SFSWAP-211ENST00000542813 PM20D2Q8IYS1 436 aa3.8□□□□□ -1.8
SFSWAP-211ENST00000542813 ELMOD2Q8IZ81 293 aa3.8□□□□□ -1.8
SFSWAP-211ENST00000542813 SAMD14Q8IZD0 417 aaPredicted RBP3.8□□□□□ -1.8
SFSWAP-211ENST00000542813 BATF2Q8N1L9 274 aa3.8□□□□□ -1.8
SFSWAP-211ENST00000542813 PCDH20Q8N6Y1 951 aaKnown RBP3.8□□□□□ -1.8
SFSWAP-211ENST00000542813 OR52E1Q8NGJ3 308 aa3.8□□□□□ -1.8
SFSWAP-211ENST00000542813 BICD2Q8TD16 824 aa3.8□□□□□ -1.8
SFSWAP-211ENST00000542813 TAAR8Q969N4 342 aa3.8□□□□□ -1.8
SFSWAP-211ENST00000542813 TMEM186Q96B77 213 aa3.8□□□□□ -1.8
SFSWAP-211ENST00000542813 FAM81BQ96LP2 452 aa3.8□□□□□ -1.8
SFSWAP-211ENST00000542813 ZNF560Q96MR9 790 aa3.8□□□□□ -1.8
SFSWAP-211ENST00000542813 CTAGE1Q96RT6 745 aa3.8□□□□□ -1.8
SFSWAP-211ENST00000542813 NAP1L3Q99457 506 aaPredicted RBP3.8□□□□□ -1.8
Retrieved 100 of 20,778 RNA–protein pairs in 63.9 ms