RNA–Protein interactions for RNA: ENST00000542068.5

CNOT9-208, Transcript of CCR4-NOT transcription complex subunit 9, humanhuman

APPRIS P1 TSL 5 BASIC

Gene CNOT9, Length 3,259 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CNOT9-208ENST00000542068 SOBPA7XYQ1 873 aa15□□□□□ -0.01
CNOT9-208ENST00000542068 PRMT5O14744 637 aaPredicted RBP15□□□□□ -0.01
CNOT9-208ENST00000542068 COCHO43405 550 aa15□□□□□ -0.01
CNOT9-208ENST00000542068 NBNO60934 754 aa15□□□□□ -0.01
CNOT9-208ENST00000542068 CNOT3O75175 753 aaKnown RBP15□□□□□ -0.01
CNOT9-208ENST00000542068 PRAMEF12O95522 483 aa15□□□□□ -0.01
CNOT9-208ENST00000542068 TSPAN12O95859 305 aa15□□□□□ -0.01
CNOT9-208ENST00000542068 KLKB1P03952 638 aa15□□□□□ -0.01
CNOT9-208ENST00000542068 BMP4P12644 408 aa15□□□□□ -0.01
CNOT9-208ENST00000542068 GJA1P17302 382 aa15□□□□□ -0.01
CNOT9-208ENST00000542068 YBEYP58557 167 aaPredicted RBP15□□□□□ -0.01
CNOT9-208ENST00000542068 PON2Q15165 354 aa15□□□□□ -0.01
CNOT9-208ENST00000542068 INAVAQ3KP66 663 aa15□□□□□ -0.01
CNOT9-208ENST00000542068 CES5AQ6NT32 575 aa15□□□□□ -0.01
CNOT9-208ENST00000542068 Q8N9G6 341 aaPredicted RBP15□□□□□ -0.01
CNOT9-208ENST00000542068 DACH2Q96NX9 599 aa15□□□□□ -0.01
CNOT9-208ENST00000542068 ATP13A3Q9H7F0 1226 aa15□□□□□ -0.01
CNOT9-208ENST00000542068 SLC25A37Q9NYZ2 338 aa15□□□□□ -0.01
CNOT9-208ENST00000542068 ENPP5Q9UJA9 477 aa15□□□□□ -0.01
CNOT9-208ENST00000542068 LSM1O15116 133 aaKnown RBP15□□□□□ -0.01
CNOT9-208ENST00000542068 SUOXP51687 545 aa15□□□□□ -0.01
CNOT9-208ENST00000542068 NEK2P51955 445 aa15□□□□□ -0.01
CNOT9-208ENST00000542068 DSC1Q08554 894 aa15□□□□□ -0.01
CNOT9-208ENST00000542068 CTF1Q16619 201 aa15□□□□□ -0.01
CNOT9-208ENST00000542068 EFL1Q7Z2Z2 1120 aaKnown RBP15□□□□□ -0.01
CNOT9-208ENST00000542068 PLD3Q8IV08 490 aa15□□□□□ -0.01
CNOT9-208ENST00000542068 RBM4BQ9BQ04 359 aaKnown RBP15□□□□□ -0.01
CNOT9-208ENST00000542068 RBM4Q9BWF3 364 aaKnown RBP15□□□□□ -0.01
CNOT9-208ENST00000542068 C8orf4Q9NR00 106 aa15□□□□□ -0.01
CNOT9-208ENST00000542068 WWOXQ9NZC7 414 aa15□□□□□ -0.01
CNOT9-208ENST00000542068 C3orf18Q9UK00 162 aa15□□□□□ -0.01
CNOT9-208ENST00000542068 RALGAPA2Q2PPJ7 1873 aa15□□□□□ -0.01
CNOT9-208ENST00000542068 KNL1Q8NG31 2342 aa15□□□□□ -0.01
CNOT9-208ENST00000542068 HTR3EA5X5Y0 456 aa15□□□□□ -0.01
CNOT9-208ENST00000542068 KRT87PA6NCN2 255 aa15□□□□□ -0.01
CNOT9-208ENST00000542068 HTR7P34969 479 aa15□□□□□ -0.01
CNOT9-208ENST00000542068 CDK5R2Q13319 367 aa15□□□□□ -0.01
CNOT9-208ENST00000542068 C6orf183Q5T699 404 aa15□□□□□ -0.01
CNOT9-208ENST00000542068 RAVER1Q8IY67 606 aaKnown RBP15□□□□□ -0.01
CNOT9-208ENST00000542068 SCML4Q8N228 414 aa15□□□□□ -0.01
CNOT9-208ENST00000542068 ISG20Q96AZ6 181 aaKnown RBP15□□□□□ -0.01
CNOT9-208ENST00000542068 INPP5KQ9BT40 448 aa15□□□□□ -0.01
CNOT9-208ENST00000542068 BOCQ9BWV1 1114 aa15□□□□□ -0.01
CNOT9-208ENST00000542068 C6orf62Q9GZU0 229 aaPredicted RBP15□□□□□ -0.01
CNOT9-208ENST00000542068 RNF38Q9H0F5 515 aa15□□□□□ -0.01
CNOT9-208ENST00000542068 GIN1Q9NXP7 522 aa15□□□□□ -0.01
CNOT9-208ENST00000542068 OR7A17O14581 309 aa14.99□□□□□ -0.01
CNOT9-208ENST00000542068 PFDN6O15212 129 aa14.99□□□□□ -0.01
CNOT9-208ENST00000542068 MYO1DO94832 1006 aa14.99□□□□□ -0.01
CNOT9-208ENST00000542068 SEC24AO95486 1093 aa14.99□□□□□ -0.01
CNOT9-208ENST00000542068 JUNBP17275 347 aaPredicted RBP14.99□□□□□ -0.01
CNOT9-208ENST00000542068 IGFBP5P24593 272 aa14.99□□□□□ -0.01
CNOT9-208ENST00000542068 HOXD9P28356 352 aaPredicted RBP14.99□□□□□ -0.01
CNOT9-208ENST00000542068 ZNF140P52738 457 aaPredicted RBP14.99□□□□□ -0.01
CNOT9-208ENST00000542068 CATSPEREQ5SY80 951 aa14.99□□□□□ -0.01
CNOT9-208ENST00000542068 ZNF683Q8IZ20 524 aa14.99□□□□□ -0.01
CNOT9-208ENST00000542068 GTF2H4Q92759 462 aa14.99□□□□□ -0.01
CNOT9-208ENST00000542068 MUL1Q969V5 352 aa14.99□□□□□ -0.01
CNOT9-208ENST00000542068 MARCH7Q9H992 704 aa14.99□□□□□ -0.01
CNOT9-208ENST00000542068 NLE1Q9NVX2 485 aaPredicted RBP14.99□□□□□ -0.01
CNOT9-208ENST00000542068 POU2F3Q9UKI9 436 aa14.99□□□□□ -0.01
CNOT9-208ENST00000542068 EIF3LQ9Y262 564 aaKnown RBP14.99□□□□□ -0.01
CNOT9-208ENST00000542068 AQP9O43315 295 aa14.99□□□□□ -0.01
CNOT9-208ENST00000542068 FAM20BO75063 409 aa14.99□□□□□ -0.01
CNOT9-208ENST00000542068 CREG1O75629 220 aa14.99□□□□□ -0.01
CNOT9-208ENST00000542068 FKBP9O95302 570 aa14.99□□□□□ -0.01
CNOT9-208ENST00000542068 MT-ND2P03891 347 aa14.99□□□□□ -0.01
CNOT9-208ENST00000542068 LCKP06239 509 aa14.99□□□□□ -0.01
CNOT9-208ENST00000542068 PGRP06401 933 aa14.99□□□□□ -0.01
CNOT9-208ENST00000542068 CKMP06732 381 aa14.99□□□□□ -0.01
CNOT9-208ENST00000542068 ISL1P61371 349 aa14.99□□□□□ -0.01
CNOT9-208ENST00000542068 GPR17Q13304 367 aa14.99□□□□□ -0.01
CNOT9-208ENST00000542068 TUBA3CQ13748 450 aa14.99□□□□□ -0.01
CNOT9-208ENST00000542068 ARHGEF7Q14155 803 aa14.99□□□□□ -0.01
CNOT9-208ENST00000542068 AHSA2Q719I0 299 aa14.99□□□□□ -0.01
CNOT9-208ENST00000542068 FKBP9P1Q75LS8 142 aa14.99□□□□□ -0.01
CNOT9-208ENST00000542068 DCP2Q8IU60 420 aaKnown RBP14.99□□□□□ -0.01
CNOT9-208ENST00000542068 ADHFE1Q8IWW8 467 aa14.99□□□□□ -0.01
CNOT9-208ENST00000542068 MICU2Q8IYU8 434 aa14.99□□□□□ -0.01
CNOT9-208ENST00000542068 TEX26Q8N6G2 289 aa14.99□□□□□ -0.01
CNOT9-208ENST00000542068 ZNF548Q8NEK5 533 aaPredicted RBP14.99□□□□□ -0.01
CNOT9-208ENST00000542068 GPR150Q8NGU9 434 aa14.99□□□□□ -0.01
CNOT9-208ENST00000542068 ADGRE3Q9BY15 652 aa14.99□□□□□ -0.01
CNOT9-208ENST00000542068 CIPCQ9C0C6 399 aa14.99□□□□□ -0.01
CNOT9-208ENST00000542068 ASB8Q9H765 288 aa14.99□□□□□ -0.01
CNOT9-208ENST00000542068 ZNF490Q9ULM2 529 aaPredicted RBP14.99□□□□□ -0.01
CNOT9-208ENST00000542068 PCDHB14Q9Y5E9 798 aa14.99□□□□□ -0.01
CNOT9-208ENST00000542068 C5orf42Q9H799 3197 aa14.99□□□□□ -0.01
CNOT9-208ENST00000542068 OR6C75A6NL08 312 aa14.98□□□□□ -0.01
CNOT9-208ENST00000542068 ANKRD66B4E2M5 251 aa14.98□□□□□ -0.01
CNOT9-208ENST00000542068 DLGAP3O95886 979 aa14.98□□□□□ -0.01
CNOT9-208ENST00000542068 CASP9P55211 416 aa14.98□□□□□ -0.01
CNOT9-208ENST00000542068 PPP2R2BQ00005 443 aa14.98□□□□□ -0.01
CNOT9-208ENST00000542068 TYSND1Q2T9J0 566 aa14.98□□□□□ -0.01
CNOT9-208ENST00000542068 TXNDC8Q6A555 127 aa14.98□□□□□ -0.01
CNOT9-208ENST00000542068 CEP68Q76N32 757 aa14.98□□□□□ -0.01
CNOT9-208ENST00000542068 ARL14EPQ8N8R7 260 aaPredicted RBP14.98□□□□□ -0.01
CNOT9-208ENST00000542068 TSPEARQ8WU66 669 aa14.98□□□□□ -0.01
CNOT9-208ENST00000542068 FAR1Q8WVX9 515 aa14.98□□□□□ -0.01
CNOT9-208ENST00000542068 TMEM161AQ9NX61 479 aa14.98□□□□□ -0.01
Retrieved 100 of 20,778 RNA–protein pairs in 24.6 ms