RNA–Protein interactions for RNA: ENST00000542001.5

VARS2-212, Transcript of valyl-tRNA synthetase 2, mitochondrial, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene VARS2, Length 4,064 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VARS2-212ENST00000542001 COL4A5P29400 1685 aa15.75■□□□□ 0.11
VARS2-212ENST00000542001 LTBP4Q8N2S1 1624 aa15.75■□□□□ 0.11
VARS2-212ENST00000542001 MAGEB17A8MXT2 336 aa15.75■□□□□ 0.11
VARS2-212ENST00000542001 DPP6P42658 865 aa15.75■□□□□ 0.11
VARS2-212ENST00000542001 OR2AP1Q8NGE2 309 aa15.75■□□□□ 0.11
VARS2-212ENST00000542001 ART5Q96L15 291 aa15.75■□□□□ 0.11
VARS2-212ENST00000542001 EPS8L2Q9H6S3 715 aa15.75■□□□□ 0.11
VARS2-212ENST00000542001 RHCGQ9UBD6 479 aa15.75■□□□□ 0.11
VARS2-212ENST00000542001 PAPSS2O95340 614 aaPredicted RBP15.75■□□□□ 0.11
VARS2-212ENST00000542001 SGCGQ13326 291 aa15.75■□□□□ 0.11
VARS2-212ENST00000542001 MTA1Q13330 715 aa15.75■□□□□ 0.11
VARS2-212ENST00000542001 DPY19L3Q6ZPD9 716 aa15.75■□□□□ 0.11
VARS2-212ENST00000542001 COLGALT2Q8IYK4 626 aa15.75■□□□□ 0.11
VARS2-212ENST00000542001 GPR65Q8IYL9 337 aa15.75■□□□□ 0.11
VARS2-212ENST00000542001 TTC29Q8NA56 475 aaPredicted RBP15.75■□□□□ 0.11
VARS2-212ENST00000542001 KCNC2Q96PR1 638 aa15.75■□□□□ 0.11
VARS2-212ENST00000542001 EHD3Q9NZN3 535 aa15.75■□□□□ 0.11
VARS2-212ENST00000542001 PLAGL1Q9UM63 463 aa15.75■□□□□ 0.11
VARS2-212ENST00000542001 SLC45A1Q9Y2W3 748 aa15.75■□□□□ 0.11
VARS2-212ENST00000542001 SMIM30A4D0T7 59 aa15.74■□□□□ 0.11
VARS2-212ENST00000542001 TRIM43BA6NCK2 446 aa15.74■□□□□ 0.11
VARS2-212ENST00000542001 FBP2O00757 339 aa15.74■□□□□ 0.11
VARS2-212ENST00000542001 ARNTP27540 789 aa15.74■□□□□ 0.11
VARS2-212ENST00000542001 DEFA1P59665 94 aa15.74■□□□□ 0.11
VARS2-212ENST00000542001 DEFA3P59666 94 aa15.74■□□□□ 0.11
VARS2-212ENST00000542001 ARMC4Q5T2S8 1044 aa15.74■□□□□ 0.11
VARS2-212ENST00000542001 IER5LQ5T953 404 aa15.74■□□□□ 0.11
VARS2-212ENST00000542001 ENPP6Q6UWR7 440 aa15.74■□□□□ 0.11
VARS2-212ENST00000542001 CCDC149Q6ZUS6 474 aa15.74■□□□□ 0.11
VARS2-212ENST00000542001 IL4I1Q96RQ9 567 aa15.74■□□□□ 0.11
VARS2-212ENST00000542001 NUSAP1Q9BXS6 441 aaKnown RBP15.74■□□□□ 0.11
VARS2-212ENST00000542001 RNF38Q9H0F5 515 aa15.74■□□□□ 0.11
VARS2-212ENST00000542001 MIR1-1HGQ9H1L0 117 aa15.74■□□□□ 0.11
VARS2-212ENST00000542001 AASDHPPTQ9NRN7 309 aa15.74■□□□□ 0.11
VARS2-212ENST00000542001 GIMAP4Q9NUV9 329 aa15.74■□□□□ 0.11
VARS2-212ENST00000542001 GPSM3Q9Y4H4 160 aa15.74■□□□□ 0.11
VARS2-212ENST00000542001 NHSQ6T4R5 1651 aa15.74■□□□□ 0.11
VARS2-212ENST00000542001 UBFD1O14562 309 aaKnown RBP15.74■□□□□ 0.11
VARS2-212ENST00000542001 SLC22A2O15244 555 aa15.74■□□□□ 0.11
VARS2-212ENST00000542001 FDXRP22570 491 aa15.74■□□□□ 0.11
VARS2-212ENST00000542001 MYBPC1Q00872 1141 aa15.74■□□□□ 0.11
VARS2-212ENST00000542001 ZNF33AQ06730 810 aa15.74■□□□□ 0.11
VARS2-212ENST00000542001 CYP2A13Q16696 494 aa15.74■□□□□ 0.11
VARS2-212ENST00000542001 SVOPQ8N4V2 548 aa15.74■□□□□ 0.11
VARS2-212ENST00000542001 MCFD2Q8NI22 146 aa15.74■□□□□ 0.11
VARS2-212ENST00000542001 CNIH3Q8TBE1 160 aa15.74■□□□□ 0.11
VARS2-212ENST00000542001 ARRDC2Q8TBH0 407 aa15.74■□□□□ 0.11
VARS2-212ENST00000542001 PLD4Q96BZ4 506 aa15.74■□□□□ 0.11
VARS2-212ENST00000542001 PGAP3Q96FM1 320 aaPredicted RBP15.74■□□□□ 0.11
VARS2-212ENST00000542001 RBM4BQ9BQ04 359 aaKnown RBP15.74■□□□□ 0.11
VARS2-212ENST00000542001 RBM4Q9BWF3 364 aaKnown RBP15.74■□□□□ 0.11
VARS2-212ENST00000542001 TREX1Q9NSU2 369 aa15.74■□□□□ 0.11
VARS2-212ENST00000542001 C7orf72A4D263 438 aa15.74■□□□□ 0.11
VARS2-212ENST00000542001 PLOD2O00469 737 aa15.74■□□□□ 0.11
VARS2-212ENST00000542001 POP4O95707 220 aaKnown RBP15.74■□□□□ 0.11
VARS2-212ENST00000542001 IFNA14P01570 189 aa15.74■□□□□ 0.11
VARS2-212ENST00000542001 ALPPL2P10696 532 aa15.74■□□□□ 0.11
VARS2-212ENST00000542001 CHRM1P11229 460 aaPredicted RBP15.74■□□□□ 0.11
VARS2-212ENST00000542001 PPP2R1BP30154 601 aa15.74■□□□□ 0.11
VARS2-212ENST00000542001 TTKP33981 857 aa15.74■□□□□ 0.11
VARS2-212ENST00000542001 KCNAB2Q13303 367 aa15.74■□□□□ 0.11
VARS2-212ENST00000542001 RAB41Q5JT25 222 aa15.74■□□□□ 0.11
VARS2-212ENST00000542001 GPRC6AQ5T6X5 926 aa15.74■□□□□ 0.11
VARS2-212ENST00000542001 R3HCC1LQ7Z5L2 792 aaKnown RBP15.74■□□□□ 0.11
VARS2-212ENST00000542001 TRIM73Q86UV7 250 aa15.74■□□□□ 0.11
VARS2-212ENST00000542001 SLC34A3Q8N130 599 aa15.74■□□□□ 0.11
VARS2-212ENST00000542001 TP53INP1Q96A56 240 aa15.74■□□□□ 0.11
VARS2-212ENST00000542001 CLIP3Q96DZ5 547 aa15.74■□□□□ 0.11
VARS2-212ENST00000542001 ZCCHC2Q9C0B9 1178 aaKnown RBP15.74■□□□□ 0.11
VARS2-212ENST00000542001 SYNDIG1Q9H7V2 258 aa15.74■□□□□ 0.11
VARS2-212ENST00000542001 ARFGEF1Q9Y6D6 1849 aa15.74■□□□□ 0.11
VARS2-212ENST00000542001 GRM6O15303 877 aa15.73■□□□□ 0.11
VARS2-212ENST00000542001 EPHX1P07099 455 aa15.73■□□□□ 0.11
VARS2-212ENST00000542001 NFATC2Q13469 925 aa15.73■□□□□ 0.11
VARS2-212ENST00000542001 GPAT3Q53EU6 434 aa15.73■□□□□ 0.11
VARS2-212ENST00000542001 SPANXN2Q5MJ10 180 aa15.73■□□□□ 0.11
VARS2-212ENST00000542001 MFSD4BQ5TF39 518 aa15.73■□□□□ 0.11
VARS2-212ENST00000542001 TMEM199Q8N511 208 aa15.73■□□□□ 0.11
VARS2-212ENST00000542001 AHSPQ9NZD4 102 aa15.73■□□□□ 0.11
VARS2-212ENST00000542001 POLR2AP24928 1970 aaKnown RBP15.73■□□□□ 0.11
VARS2-212ENST00000542001 TNFRSF11BO00300 401 aa15.73■□□□□ 0.11
VARS2-212ENST00000542001 TLL1O43897 1013 aa15.73■□□□□ 0.11
VARS2-212ENST00000542001 FKTNO75072 461 aa15.73■□□□□ 0.11
VARS2-212ENST00000542001 XYLBO75191 536 aa15.73■□□□□ 0.11
VARS2-212ENST00000542001 RFPL2O75678 378 aa15.73■□□□□ 0.11
VARS2-212ENST00000542001 MAPK9P45984 424 aa15.73■□□□□ 0.11
VARS2-212ENST00000542001 PGM2L1Q6PCE3 622 aa15.73■□□□□ 0.11
VARS2-212ENST00000542001 NUDT18Q6ZVK8 323 aa15.73■□□□□ 0.11
VARS2-212ENST00000542001 EIF3MQ7L2H7 374 aaKnown RBP15.73■□□□□ 0.11
VARS2-212ENST00000542001 GATAD2AQ86YP4 633 aa15.73■□□□□ 0.11
VARS2-212ENST00000542001 C10orf53Q8N6V4 93 aa15.73■□□□□ 0.11
VARS2-212ENST00000542001 ATL1Q8WXF7 558 aa15.73■□□□□ 0.11
VARS2-212ENST00000542001 KCNJ9Q92806 393 aa15.73■□□□□ 0.11
VARS2-212ENST00000542001 NT5C3BQ969T7 300 aa15.73■□□□□ 0.11
VARS2-212ENST00000542001 SLC22A12Q96S37 553 aa15.73■□□□□ 0.11
VARS2-212ENST00000542001 PALMDQ9NP74 551 aa15.73■□□□□ 0.11
VARS2-212ENST00000542001 ITM2CQ9NQX7 267 aa15.73■□□□□ 0.11
VARS2-212ENST00000542001 PCDHGB5Q9Y5G0 923 aa15.73■□□□□ 0.11
VARS2-212ENST00000542001 ISM1B1AKI9 464 aa15.73■□□□□ 0.11
VARS2-212ENST00000542001 HHLA1C9JL84 531 aa15.73■□□□□ 0.11
Retrieved 100 of 20,778 RNA–protein pairs in 22.7 ms