RNA–Protein interactions for RNA: ENST00000540998.5

CDC42SE1-207, Transcript of CDC42 small effector 1, humanhuman

APPRIS P1 TSL 2 BASIC

Gene CDC42SE1, Length 3,181 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDC42SE1-207ENST00000540998 MTPAPQ9NVV4 582 aaKnown RBP eCLIP10.14□□□□□ -0.79
CDC42SE1-207ENST00000540998 SCHIP1Q9P0W5 487 aaPredicted RBP10.14□□□□□ -0.79
CDC42SE1-207ENST00000540998 ZNF490Q9ULM2 529 aaPredicted RBP10.14□□□□□ -0.79
CDC42SE1-207ENST00000540998 CCL27Q9Y4X3 112 aa10.14□□□□□ -0.79
CDC42SE1-207ENST00000540998 PCDHB9Q9Y5E1 797 aa10.14□□□□□ -0.79
CDC42SE1-207ENST00000540998 K7ERQ8 282 aa10.14□□□□□ -0.79
CDC42SE1-207ENST00000540998 TBX1O43435 398 aa10.14□□□□□ -0.79
CDC42SE1-207ENST00000540998 KLK8O60259 260 aa10.14□□□□□ -0.79
CDC42SE1-207ENST00000540998 DNTTP04053 509 aa10.14□□□□□ -0.79
CDC42SE1-207ENST00000540998 ABCB1P08183 1280 aaPredicted RBP10.14□□□□□ -0.79
CDC42SE1-207ENST00000540998 TNFRSF1BP20333 461 aa10.14□□□□□ -0.79
CDC42SE1-207ENST00000540998 TGM1P22735 817 aa10.14□□□□□ -0.79
CDC42SE1-207ENST00000540998 NUDT6P53370 316 aa10.14□□□□□ -0.79
CDC42SE1-207ENST00000540998 CRISP3P54108 245 aa10.14□□□□□ -0.79
CDC42SE1-207ENST00000540998 CYP4F2P78329 520 aa10.14□□□□□ -0.79
CDC42SE1-207ENST00000540998 TP53BP2Q13625 1128 aa10.14□□□□□ -0.79
CDC42SE1-207ENST00000540998 C9orf131Q5VYM1 1079 aa10.14□□□□□ -0.79
CDC42SE1-207ENST00000540998 EID3Q8N140 333 aa10.14□□□□□ -0.79
CDC42SE1-207ENST00000540998 NKAPQ8N5F7 415 aaKnown RBP10.14□□□□□ -0.79
CDC42SE1-207ENST00000540998 ZNF540Q8NDQ6 660 aa10.14□□□□□ -0.79
CDC42SE1-207ENST00000540998 TRPV1Q8NER1 839 aa10.14□□□□□ -0.79
CDC42SE1-207ENST00000540998 RBM4BQ9BQ04 359 aaKnown RBP10.14□□□□□ -0.79
CDC42SE1-207ENST00000540998 RBM4Q9BWF3 364 aaKnown RBP10.14□□□□□ -0.79
CDC42SE1-207ENST00000540998 UGT2B28Q9BY64 529 aa10.14□□□□□ -0.79
CDC42SE1-207ENST00000540998 YTHDF1Q9BYJ9 559 aaKnown RBP10.14□□□□□ -0.79
CDC42SE1-207ENST00000540998 MUC13Q9H3R2 512 aa10.14□□□□□ -0.79
CDC42SE1-207ENST00000540998 SPC25Q9HBM1 224 aa10.14□□□□□ -0.79
CDC42SE1-207ENST00000540998 HMG20AQ9NP66 347 aa10.14□□□□□ -0.79
CDC42SE1-207ENST00000540998 TRMT13Q9NUP7 481 aaKnown RBP10.14□□□□□ -0.79
CDC42SE1-207ENST00000540998 FAM32AQ9Y421 112 aaKnown RBP10.14□□□□□ -0.79
CDC42SE1-207ENST00000540998 A0A096LPI6 279 aa10.13□□□□□ -0.79
CDC42SE1-207ENST00000540998 C2orf81A6NN90 581 aa10.13□□□□□ -0.79
CDC42SE1-207ENST00000540998 C16orf96A6NNT2 1141 aa10.13□□□□□ -0.79
CDC42SE1-207ENST00000540998 CNOT3O75175 753 aaKnown RBP10.13□□□□□ -0.79
CDC42SE1-207ENST00000540998 VIPP01282 170 aa10.13□□□□□ -0.79
CDC42SE1-207ENST00000540998 C21orf33P30042 268 aaPredicted RBP10.13□□□□□ -0.79
CDC42SE1-207ENST00000540998 SELENBP1Q13228 472 aa10.13□□□□□ -0.79
CDC42SE1-207ENST00000540998 CYP27C1Q4G0S4 372 aa10.13□□□□□ -0.79
CDC42SE1-207ENST00000540998 ANKRD13BQ86YJ7 626 aa10.13□□□□□ -0.79
CDC42SE1-207ENST00000540998 LRRC49Q8IUZ0 686 aa10.13□□□□□ -0.79
CDC42SE1-207ENST00000540998 MICU2Q8IYU8 434 aa10.13□□□□□ -0.79
CDC42SE1-207ENST00000540998 ADGRG2Q8IZP9 1017 aa10.13□□□□□ -0.79
CDC42SE1-207ENST00000540998 FAM120BQ96EK7 910 aaKnown RBP10.13□□□□□ -0.79
CDC42SE1-207ENST00000540998 SGIP1Q9BQI5 828 aa10.13□□□□□ -0.79
CDC42SE1-207ENST00000540998 FCF1Q9Y324 198 aaKnown RBP10.13□□□□□ -0.79
CDC42SE1-207ENST00000540998 ANGPTL3Q9Y5C1 460 aa10.13□□□□□ -0.79
CDC42SE1-207ENST00000540998 COL4A4P53420 1690 aaPredicted RBP10.13□□□□□ -0.79
CDC42SE1-207ENST00000540998 CASP8AP2Q9UKL3 1982 aa10.13□□□□□ -0.79
CDC42SE1-207ENST00000540998 PSMD11O00231 422 aa10.13□□□□□ -0.79
CDC42SE1-207ENST00000540998 LPOP22079 712 aaPredicted RBP10.13□□□□□ -0.79
CDC42SE1-207ENST00000540998 VLDLRP98155 873 aa10.13□□□□□ -0.79
CDC42SE1-207ENST00000540998 DUSP4Q13115 394 aa10.13□□□□□ -0.79
CDC42SE1-207ENST00000540998 MAP2K5Q13163 448 aa10.13□□□□□ -0.79
CDC42SE1-207ENST00000540998 MADCAM1Q13477 382 aa10.13□□□□□ -0.79
CDC42SE1-207ENST00000540998 TUBA3CQ13748 450 aa10.13□□□□□ -0.79
CDC42SE1-207ENST00000540998 CLCA4Q14CN2 919 aa10.13□□□□□ -0.79
CDC42SE1-207ENST00000540998 P2RY8Q86VZ1 359 aa10.13□□□□□ -0.79
CDC42SE1-207ENST00000540998 ZDHHC21Q8IVQ6 265 aa10.13□□□□□ -0.79
CDC42SE1-207ENST00000540998 PAF1Q8N7H5 531 aa10.13□□□□□ -0.79
CDC42SE1-207ENST00000540998 LEMD2Q8NC56 503 aa10.13□□□□□ -0.79
CDC42SE1-207ENST00000540998 PJA1Q8NG27 643 aa10.13□□□□□ -0.79
CDC42SE1-207ENST00000540998 TSPEARQ8WU66 669 aa10.13□□□□□ -0.79
CDC42SE1-207ENST00000540998 PROX1Q92786 737 aa10.13□□□□□ -0.79
CDC42SE1-207ENST00000540998 C6orf62Q9GZU0 229 aaPredicted RBP10.13□□□□□ -0.79
CDC42SE1-207ENST00000540998 KAT8Q9H7Z6 458 aaKnown RBP10.13□□□□□ -0.79
CDC42SE1-207ENST00000540998 POPDC3Q9HBV1 291 aa10.13□□□□□ -0.79
CDC42SE1-207ENST00000540998 TAS2R16Q9NYV7 291 aa10.13□□□□□ -0.79
CDC42SE1-207ENST00000540998 UBA2Q9UBT2 640 aaPredicted RBP10.13□□□□□ -0.79
CDC42SE1-207ENST00000540998 MBD1Q9UIS9 605 aaPredicted RBP10.13□□□□□ -0.79
CDC42SE1-207ENST00000540998 ERVK-11Q9UQG0 969 aa10.13□□□□□ -0.79
CDC42SE1-207ENST00000540998 CCDC88CQ9P219 2028 aa10.12□□□□□ -0.79
CDC42SE1-207ENST00000540998 TYW5A2RUC4 315 aaKnown RBP10.12□□□□□ -0.79
CDC42SE1-207ENST00000540998 TTC34A8MYJ7 566 aa10.12□□□□□ -0.79
CDC42SE1-207ENST00000540998 RECQL5O94762 991 aaPredicted RBP10.12□□□□□ -0.79
CDC42SE1-207ENST00000540998 SEC24AO95486 1093 aa10.12□□□□□ -0.79
CDC42SE1-207ENST00000540998 UGT2B4P06133 528 aa10.12□□□□□ -0.79
CDC42SE1-207ENST00000540998 DBTP11182 482 aaKnown RBP10.12□□□□□ -0.79
CDC42SE1-207ENST00000540998 GRK5P34947 590 aa10.12□□□□□ -0.79
CDC42SE1-207ENST00000540998 KRT20P35900 424 aa10.12□□□□□ -0.79
CDC42SE1-207ENST00000540998 CREMQ03060 361 aa10.12□□□□□ -0.79
CDC42SE1-207ENST00000540998 ARHGEF7Q14155 803 aa10.12□□□□□ -0.79
CDC42SE1-207ENST00000540998 PARP15Q460N3 678 aa10.12□□□□□ -0.79
CDC42SE1-207ENST00000540998 PTRHD1Q6GMV3 140 aaKnown RBP10.12□□□□□ -0.79
CDC42SE1-207ENST00000540998 DOK6Q6PKX4 331 aa10.12□□□□□ -0.79
CDC42SE1-207ENST00000540998 LRRC8DQ7L1W4 858 aa10.12□□□□□ -0.79
CDC42SE1-207ENST00000540998 MGME1Q9BQP7 344 aa10.12□□□□□ -0.79
CDC42SE1-207ENST00000540998 MAGEE1Q9HCI5 957 aa10.12□□□□□ -0.79
CDC42SE1-207ENST00000540998 DCAF13Q9NV06 445 aaKnown RBP10.12□□□□□ -0.79
CDC42SE1-207ENST00000540998 ATAD3AQ9NVI7 634 aa10.12□□□□□ -0.79
CDC42SE1-207ENST00000540998 WWOXQ9NZC7 414 aa10.12□□□□□ -0.79
CDC42SE1-207ENST00000540998 KIAA1522Q9P206 1035 aaPredicted RBP10.12□□□□□ -0.79
CDC42SE1-207ENST00000540998 PCDH10Q9P2E7 1040 aa10.12□□□□□ -0.79
CDC42SE1-207ENST00000540998 SEPT3Q9UH03 358 aa10.12□□□□□ -0.79
CDC42SE1-207ENST00000540998 C3orf18Q9UK00 162 aa10.12□□□□□ -0.79
CDC42SE1-207ENST00000540998 PPT2Q9UMR5 302 aa10.12□□□□□ -0.79
CDC42SE1-207ENST00000540998 CHD5Q8TDI0 1954 aa10.12□□□□□ -0.79
CDC42SE1-207ENST00000540998 ANKRD66B4E2M5 251 aa10.12□□□□□ -0.79
CDC42SE1-207ENST00000540998 F5H5T6 163 aa10.12□□□□□ -0.79
CDC42SE1-207ENST00000540998 FAM20BO75063 409 aa10.12□□□□□ -0.79
CDC42SE1-207ENST00000540998 GABARAPO95166 117 aa10.12□□□□□ -0.79
Retrieved 100 of 20,778 RNA–protein pairs in 25.7 ms