RNA–Protein interactions for RNA: ENST00000540709.1

MDM2-227, Transcript of MDM2 proto-oncogene, humanhuman

TSL 3

Gene MDM2, Length 502 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MDM2-227ENST00000540709 VILLO15195 856 aa3.1□□□□□ -1.91
MDM2-227ENST00000540709 PI15O43692 258 aa3.1□□□□□ -1.91
MDM2-227ENST00000540709 PRAMEF11O60813 436 aa3.1□□□□□ -1.91
MDM2-227ENST00000540709 KHDRBS3O75525 346 aaKnown RBP3.1□□□□□ -1.91
MDM2-227ENST00000540709 DFFBO76075 338 aa3.1□□□□□ -1.91
MDM2-227ENST00000540709 ZSCAN5DPP0CG00 497 aa3.1□□□□□ -1.91
MDM2-227ENST00000540709 CAPN2P17655 700 aa3.1□□□□□ -1.91
MDM2-227ENST00000540709 UGT1A4P22310 534 aa3.1□□□□□ -1.91
MDM2-227ENST00000540709 LHCGRP22888 699 aa3.1□□□□□ -1.91
MDM2-227ENST00000540709 JAK1P23458 1154 aa3.1□□□□□ -1.91
MDM2-227ENST00000540709 SLC6A6P31641 620 aa3.1□□□□□ -1.91
MDM2-227ENST00000540709 SLC15A1P46059 708 aa3.1□□□□□ -1.91
MDM2-227ENST00000540709 CCR10P46092 362 aa3.1□□□□□ -1.91
MDM2-227ENST00000540709 CDK3Q00526 305 aa3.1□□□□□ -1.91
MDM2-227ENST00000540709 ITPRIPL2Q3MIP1 535 aa3.1□□□□□ -1.91
MDM2-227ENST00000540709 SLC25A53Q5H9E4 307 aa3.1□□□□□ -1.91
MDM2-227ENST00000540709 TCTEX1D4Q5JR98 221 aa3.1□□□□□ -1.91
MDM2-227ENST00000540709 FAM180BQ6P0A1 224 aa3.1□□□□□ -1.91
MDM2-227ENST00000540709 FIP1L1Q6UN15 594 aaKnown RBP3.1□□□□□ -1.91
MDM2-227ENST00000540709 LINGO4Q6UY18 593 aa3.1□□□□□ -1.91
MDM2-227ENST00000540709 SH2D6Q7Z4S9 175 aa3.1□□□□□ -1.91
MDM2-227ENST00000540709 C17orf53Q8N3J3 647 aaPredicted RBP3.1□□□□□ -1.91
MDM2-227ENST00000540709 MARVELD2Q8N4S9 558 aa3.1□□□□□ -1.91
MDM2-227ENST00000540709 PHLDA1Q8WV24 401 aaPredicted RBP3.1□□□□□ -1.91
MDM2-227ENST00000540709 ZNF486Q96H40 463 aaPredicted RBP3.1□□□□□ -1.91
MDM2-227ENST00000540709 FNBP1Q96RU3 617 aa3.1□□□□□ -1.91
MDM2-227ENST00000540709 PAFAH2Q99487 392 aa3.1□□□□□ -1.91
MDM2-227ENST00000540709 PITPNM3Q9BZ71 974 aa3.1□□□□□ -1.91
MDM2-227ENST00000540709 MIS12Q9H081 205 aa3.1□□□□□ -1.91
MDM2-227ENST00000540709 P4HTMQ9NXG6 502 aa3.1□□□□□ -1.91
MDM2-227ENST00000540709 THEGQ9P2T0 379 aa3.1□□□□□ -1.91
MDM2-227ENST00000540709 GRIP1Q9Y3R0 1128 aa3.1□□□□□ -1.91
MDM2-227ENST00000540709 ASTN2O75129 1339 aaPredicted RBP3.1□□□□□ -1.91
MDM2-227ENST00000540709 CDRT15L2A8MXV6 281 aa3.09□□□□□ -1.91
MDM2-227ENST00000540709 EPHB6O15197 1021 aa3.09□□□□□ -1.91
MDM2-227ENST00000540709 TSPAN1O60635 241 aa3.09□□□□□ -1.91
MDM2-227ENST00000540709 PTP4A3O75365 173 aa3.09□□□□□ -1.91
MDM2-227ENST00000540709 AVILO75366 819 aa3.09□□□□□ -1.91
MDM2-227ENST00000540709 MED24O75448 989 aa3.09□□□□□ -1.91
MDM2-227ENST00000540709 CREG1O75629 220 aa3.09□□□□□ -1.91
MDM2-227ENST00000540709 DDHD2O94830 711 aa3.09□□□□□ -1.91
MDM2-227ENST00000540709 BCL10O95999 233 aa3.09□□□□□ -1.91
MDM2-227ENST00000540709 CDH3P22223 829 aa3.09□□□□□ -1.91
MDM2-227ENST00000540709 TM4SF1P30408 202 aa3.09□□□□□ -1.91
MDM2-227ENST00000540709 GCH1P30793 250 aa3.09□□□□□ -1.91
MDM2-227ENST00000540709 MNDAP41218 407 aa3.09□□□□□ -1.91
MDM2-227ENST00000540709 ARSEP51690 589 aa3.09□□□□□ -1.91
MDM2-227ENST00000540709 ELFN2Q5R3F8 820 aa3.09□□□□□ -1.91
MDM2-227ENST00000540709 ZNF774Q6NX45 483 aa3.09□□□□□ -1.91
MDM2-227ENST00000540709 GPRIN3Q6ZVF9 776 aa3.09□□□□□ -1.91
MDM2-227ENST00000540709 BTN2A1Q7KYR7 527 aa3.09□□□□□ -1.91
MDM2-227ENST00000540709 CEP57L1Q8IYX8 460 aa3.09□□□□□ -1.91
MDM2-227ENST00000540709 OR11H4Q8NGC9 324 aa3.09□□□□□ -1.91
MDM2-227ENST00000540709 OR13C3Q8NGS6 347 aa3.09□□□□□ -1.91
MDM2-227ENST00000540709 OR2L2Q8NH16 312 aa3.09□□□□□ -1.91
MDM2-227ENST00000540709 MOSPD2Q8NHP6 518 aa3.09□□□□□ -1.91
MDM2-227ENST00000540709 CCDC107Q8WV48 283 aa3.09□□□□□ -1.91
MDM2-227ENST00000540709 TIGD1Q96MW7 591 aa3.09□□□□□ -1.91
MDM2-227ENST00000540709 CCDC177Q9NQR7 707 aaPredicted RBP3.09□□□□□ -1.91
MDM2-227ENST00000540709 FGF21Q9NSA1 209 aa3.09□□□□□ -1.91
MDM2-227ENST00000540709 OR6C2Q9NZP2 312 aa3.09□□□□□ -1.91
MDM2-227ENST00000540709 SEC63Q9UGP8 760 aaKnown RBP3.09□□□□□ -1.91
MDM2-227ENST00000540709 KLK13Q9UKR3 277 aa3.09□□□□□ -1.91
MDM2-227ENST00000540709 GRID1Q9ULK0 1009 aa3.09□□□□□ -1.91
MDM2-227ENST00000540709 PPP2R2CQ9Y2T4 447 aa3.09□□□□□ -1.91
MDM2-227ENST00000540709 ITIH6Q6UXX5 1313 aa3.09□□□□□ -1.91
MDM2-227ENST00000540709 COL5A2P05997 1499 aaPredicted RBP3.09□□□□□ -1.92
MDM2-227ENST00000540709 ANKUB1A6NFN9 424 aa3.08□□□□□ -1.92
MDM2-227ENST00000540709 IGHV4-31P0DP07 118 aa3.08□□□□□ -1.92
MDM2-227ENST00000540709 HSPA8P11142 646 aaKnown RBP3.08□□□□□ -1.92
MDM2-227ENST00000540709 DARSP14868 501 aaKnown RBP3.08□□□□□ -1.92
MDM2-227ENST00000540709 PRKACGP22612 351 aa3.08□□□□□ -1.92
MDM2-227ENST00000540709 DNASE1P24855 282 aa3.08□□□□□ -1.92
MDM2-227ENST00000540709 PTPN3P26045 913 aa3.08□□□□□ -1.92
MDM2-227ENST00000540709 LEPRP48357 1165 aaKnown RBP3.08□□□□□ -1.92
MDM2-227ENST00000540709 NAP1L1P55209 391 aaKnown RBP3.08□□□□□ -1.92
MDM2-227ENST00000540709 HUNKP57058 714 aa3.08□□□□□ -1.92
MDM2-227ENST00000540709 DCAF7P61962 342 aa3.08□□□□□ -1.92
MDM2-227ENST00000540709 SIRPAP78324 504 aa3.08□□□□□ -1.92
MDM2-227ENST00000540709 GCNT1Q02742 428 aa3.08□□□□□ -1.92
MDM2-227ENST00000540709 COX10Q12887 443 aa3.08□□□□□ -1.92
MDM2-227ENST00000540709 CTU2Q2VPK5 515 aaKnown RBP3.08□□□□□ -1.92
MDM2-227ENST00000540709 XKR3Q5GH77 459 aa3.08□□□□□ -1.92
MDM2-227ENST00000540709 LCN1P1Q5VSP4 162 aa3.08□□□□□ -1.92
MDM2-227ENST00000540709 ZNF343Q6P1L6 599 aa3.08□□□□□ -1.92
MDM2-227ENST00000540709 TMEM207Q6UWW9 146 aa3.08□□□□□ -1.92
MDM2-227ENST00000540709 Q6ZRP5 223 aa3.08□□□□□ -1.92
MDM2-227ENST00000540709 TMEM173Q86WV6 379 aaPredicted RBP3.08□□□□□ -1.92
MDM2-227ENST00000540709 CERS3Q8IU89 383 aa3.08□□□□□ -1.92
MDM2-227ENST00000540709 AMER3Q8N944 861 aa3.08□□□□□ -1.92
MDM2-227ENST00000540709 PAPD5Q8NDF8 572 aaKnown RBP3.08□□□□□ -1.92
MDM2-227ENST00000540709 NPEPL1Q8NDH3 523 aa3.08□□□□□ -1.92
MDM2-227ENST00000540709 MCUQ8NE86 351 aa3.08□□□□□ -1.92
MDM2-227ENST00000540709 OR6S1Q8NH40 331 aa3.08□□□□□ -1.92
MDM2-227ENST00000540709 ATP8B4Q8TF62 1192 aa3.08□□□□□ -1.92
MDM2-227ENST00000540709 NEK1Q96PY6 1258 aa3.08□□□□□ -1.92
MDM2-227ENST00000540709 SOSTQ9BQB4 213 aa3.08□□□□□ -1.92
MDM2-227ENST00000540709 BTBD10Q9BSF8 475 aa3.08□□□□□ -1.92
MDM2-227ENST00000540709 OR2B2Q9GZK3 357 aa3.08□□□□□ -1.92
MDM2-227ENST00000540709 FAM49AQ9H0Q0 323 aaPredicted RBP3.08□□□□□ -1.92
Retrieved 100 of 20,778 RNA–protein pairs in 23.7 ms