RNA–Protein interactions for RNA: ENST00000540357.5

DNMT1-203, Transcript of DNA methyltransferase 1, humanhuman

TSL 5 BASIC

Gene DNMT1, Length 4,916 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
DNMT1-203ENST00000540357 CRHBPP24387 322 aa12.76□□□□□ -0.37
DNMT1-203ENST00000540357 MLLT6P55198 1093 aaPredicted RBP12.76□□□□□ -0.37
DNMT1-203ENST00000540357 CD47Q08722 323 aa12.76□□□□□ -0.37
DNMT1-203ENST00000540357 PKDCCQ504Y2 493 aa12.76□□□□□ -0.37
DNMT1-203ENST00000540357 SDHAF4Q5VUM1 108 aa12.76□□□□□ -0.37
DNMT1-203ENST00000540357 HMBOX1Q6NT76 420 aa12.76□□□□□ -0.37
DNMT1-203ENST00000540357 CEP295NLQ96MC4 621 aa12.76□□□□□ -0.37
DNMT1-203ENST00000540357 ALPK1Q96QP1 1244 aa12.76□□□□□ -0.37
DNMT1-203ENST00000540357 CIPCQ9C0C6 399 aa12.76□□□□□ -0.37
DNMT1-203ENST00000540357 NAA50Q9GZZ1 169 aaKnown RBP12.76□□□□□ -0.37
DNMT1-203ENST00000540357 TPK1Q9H3S4 243 aa12.76□□□□□ -0.37
DNMT1-203ENST00000540357 SLC25A13Q9UJS0 675 aa12.76□□□□□ -0.37
DNMT1-203ENST00000540357 KCTD3Q9Y597 815 aa12.76□□□□□ -0.37
DNMT1-203ENST00000540357 CENPBD1B2RD01 187 aa12.76□□□□□ -0.37
DNMT1-203ENST00000540357 NIPSNAP2O75323 286 aa12.76□□□□□ -0.37
DNMT1-203ENST00000540357 EPOP01588 193 aa12.76□□□□□ -0.37
DNMT1-203ENST00000540357 MT-ND2P03891 347 aa12.76□□□□□ -0.37
DNMT1-203ENST00000540357 CDH12P55289 794 aa12.76□□□□□ -0.37
DNMT1-203ENST00000540357 CYBRD1Q53TN4 286 aa12.76□□□□□ -0.37
DNMT1-203ENST00000540357 CES5AQ6NT32 575 aa12.76□□□□□ -0.37
DNMT1-203ENST00000540357 ACVR1CQ8NER5 493 aa12.76□□□□□ -0.37
DNMT1-203ENST00000540357 BHMTQ93088 406 aa12.76□□□□□ -0.37
DNMT1-203ENST00000540357 SLC38A2Q96QD8 506 aa12.76□□□□□ -0.37
DNMT1-203ENST00000540357 FABP12A6NFH5 140 aa12.76□□□□□ -0.37
DNMT1-203ENST00000540357 J3KR12 359 aa12.76□□□□□ -0.37
DNMT1-203ENST00000540357 IQCCQ4KMZ1 466 aa12.76□□□□□ -0.37
DNMT1-203ENST00000540357 PDE12Q6L8Q7 609 aaKnown RBP12.76□□□□□ -0.37
DNMT1-203ENST00000540357 PNCKQ6P2M8 343 aa12.76□□□□□ -0.37
DNMT1-203ENST00000540357 OR10G2Q8NGC3 310 aa12.76□□□□□ -0.37
DNMT1-203ENST00000540357 MYO19Q96H55 970 aa12.76□□□□□ -0.37
DNMT1-203ENST00000540357 UHRF1Q96T88 793 aaPredicted RBP12.76□□□□□ -0.37
DNMT1-203ENST00000540357 TCF25Q9BQ70 676 aa12.76□□□□□ -0.37
DNMT1-203ENST00000540357 SACM1LQ9NTJ5 587 aa12.76□□□□□ -0.37
DNMT1-203ENST00000540357 SPATA2Q9UM82 520 aa12.76□□□□□ -0.37
DNMT1-203ENST00000540357 JUNBP17275 347 aaPredicted RBP12.75□□□□□ -0.37
DNMT1-203ENST00000540357 CTPS1P17812 591 aa12.75□□□□□ -0.37
DNMT1-203ENST00000540357 PAICSP22234 425 aaKnown RBP12.75□□□□□ -0.37
DNMT1-203ENST00000540357 DPP6P42658 865 aa12.75□□□□□ -0.37
DNMT1-203ENST00000540357 USP41Q3LFD5 358 aa12.75□□□□□ -0.37
DNMT1-203ENST00000540357 EMID1Q96A84 441 aaPredicted RBP12.75□□□□□ -0.37
DNMT1-203ENST00000540357 COPS8Q99627 209 aa12.75□□□□□ -0.37
DNMT1-203ENST00000540357 ADAM2Q99965 735 aa12.75□□□□□ -0.37
DNMT1-203ENST00000540357 C2orf49Q9BVC5 232 aaPredicted RBP12.75□□□□□ -0.37
DNMT1-203ENST00000540357 THUMPD1Q9NXG2 353 aaKnown RBP12.75□□□□□ -0.37
DNMT1-203ENST00000540357 SARDHQ9UL12 918 aa12.75□□□□□ -0.37
DNMT1-203ENST00000540357 ADM5C9JUS6 153 aa12.75□□□□□ -0.37
DNMT1-203ENST00000540357 CASKO14936 926 aa12.75□□□□□ -0.37
DNMT1-203ENST00000540357 USP2O75604 605 aaPredicted RBP12.75□□□□□ -0.37
DNMT1-203ENST00000540357 UPK1BO75841 260 aa12.75□□□□□ -0.37
DNMT1-203ENST00000540357 DHFRP00374 187 aa12.75□□□□□ -0.37
DNMT1-203ENST00000540357 PSMD8P48556 350 aa12.75□□□□□ -0.37
DNMT1-203ENST00000540357 RPIAP49247 311 aa12.75□□□□□ -0.37
DNMT1-203ENST00000540357 SPANXN4Q5MJ08 99 aa12.75□□□□□ -0.37
DNMT1-203ENST00000540357 ADCK2Q7Z695 626 aa12.75□□□□□ -0.37
DNMT1-203ENST00000540357 OR52J3Q8NH60 311 aa12.75□□□□□ -0.37
DNMT1-203ENST00000540357 SCAMP5Q8TAC9 235 aa12.75□□□□□ -0.37
DNMT1-203ENST00000540357 PPP1R13LQ8WUF5 828 aa12.75□□□□□ -0.37
DNMT1-203ENST00000540357 ZFYVE1Q9HBF4 777 aa12.75□□□□□ -0.37
DNMT1-203ENST00000540357 NLE1Q9NVX2 485 aaPredicted RBP12.75□□□□□ -0.37
DNMT1-203ENST00000540357 POLR3BQ9NW08 1133 aaPredicted RBP12.75□□□□□ -0.37
DNMT1-203ENST00000540357 KLHL28Q9NXS3 571 aa12.75□□□□□ -0.37
DNMT1-203ENST00000540357 TRPC4Q9UBN4 977 aa12.75□□□□□ -0.37
DNMT1-203ENST00000540357 ZNF222Q9UK12 451 aa12.75□□□□□ -0.37
DNMT1-203ENST00000540357 SYNDIG1LA6NDD5 238 aa12.75□□□□□ -0.37
DNMT1-203ENST00000540357 TLR5O60602 858 aa12.75□□□□□ -0.37
DNMT1-203ENST00000540357 TSPAN9O75954 239 aa12.75□□□□□ -0.37
DNMT1-203ENST00000540357 SLITRK5O94991 958 aa12.75□□□□□ -0.37
DNMT1-203ENST00000540357 PRPS1L1P21108 318 aa12.75□□□□□ -0.37
DNMT1-203ENST00000540357 CDH4P55283 916 aa12.75□□□□□ -0.37
DNMT1-203ENST00000540357 RCAN2Q14206 197 aa12.75□□□□□ -0.37
DNMT1-203ENST00000540357 TAF1CQ15572 869 aaPredicted RBP12.75□□□□□ -0.37
DNMT1-203ENST00000540357 FAM117BQ6P1L5 589 aa12.75□□□□□ -0.37
DNMT1-203ENST00000540357 CCDC149Q6ZUS6 474 aa12.75□□□□□ -0.37
DNMT1-203ENST00000540357 DENND1CQ8IV53 801 aa12.75□□□□□ -0.37
DNMT1-203ENST00000540357 EEF1AKMT1Q8WVE0 214 aa12.75□□□□□ -0.37
DNMT1-203ENST00000540357 C1GALT1C1Q96EU7 318 aa12.75□□□□□ -0.37
DNMT1-203ENST00000540357 KCNC2Q96PR1 638 aa12.75□□□□□ -0.37
DNMT1-203ENST00000540357 CORO1BQ9BR76 489 aa12.75□□□□□ -0.37
DNMT1-203ENST00000540357 PDGFDQ9GZP0 370 aaPredicted RBP12.75□□□□□ -0.37
DNMT1-203ENST00000540357 ATP13A3Q9H7F0 1226 aa12.75□□□□□ -0.37
DNMT1-203ENST00000540357 ATP6V1HQ9UI12 483 aa12.75□□□□□ -0.37
DNMT1-203ENST00000540357 MYH14Q7Z406 1995 aaKnown RBP12.75□□□□□ -0.37
DNMT1-203ENST00000540357 CLIC1O00299 241 aa12.74□□□□□ -0.37
DNMT1-203ENST00000540357 ORC5O43913 435 aa12.74□□□□□ -0.37
DNMT1-203ENST00000540357 SH3BGRLO75368 114 aa12.74□□□□□ -0.37
DNMT1-203ENST00000540357 GABBR2O75899 941 aa12.74□□□□□ -0.37
DNMT1-203ENST00000540357 CNTN5O94779 1100 aa12.74□□□□□ -0.37
DNMT1-203ENST00000540357 SLC16A1P53985 500 aa12.74□□□□□ -0.37
DNMT1-203ENST00000540357 HMGCS1Q01581 520 aa12.74□□□□□ -0.37
DNMT1-203ENST00000540357 PRSS48Q7RTY5 328 aa12.74□□□□□ -0.37
DNMT1-203ENST00000540357 GALNT7Q86SF2 657 aa12.74□□□□□ -0.37
DNMT1-203ENST00000540357 ITIH5Q86UX2 942 aa12.74□□□□□ -0.37
DNMT1-203ENST00000540357 CLP1Q92989 425 aaKnown RBP12.74□□□□□ -0.37
DNMT1-203ENST00000540357 UBE2E3Q969T4 207 aa12.74□□□□□ -0.37
DNMT1-203ENST00000540357 CDCA5Q96FF9 252 aa12.74□□□□□ -0.37
DNMT1-203ENST00000540357 SLC2A11Q9BYW1 496 aa12.74□□□□□ -0.37
DNMT1-203ENST00000540357 CRTAC1Q9NQ79 661 aa12.74□□□□□ -0.37
DNMT1-203ENST00000540357 ADAMTS5Q9UNA0 930 aa12.74□□□□□ -0.37
DNMT1-203ENST00000540357 MAN2B2Q9Y2E5 1009 aa12.74□□□□□ -0.37
DNMT1-203ENST00000540357 GLYATL1P3A0A0U1RQE8 302 aa12.74□□□□□ -0.37
Retrieved 100 of 20,778 RNA–protein pairs in 20.3 ms