RNA–Protein interactions for RNA: ENST00000540060.1

LPCAT3-209, Transcript of lysophosphatidylcholine acyltransferase 3, humanhuman

TSL 4

Gene LPCAT3, Length 562 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LPCAT3-209ENST00000540060 FBXO15Q8NCQ5 510 aaPredicted RBP6.77□□□□□ -1.33
LPCAT3-209ENST00000540060 CFAP61Q8NHU2 1237 aa6.77□□□□□ -1.33
LPCAT3-209ENST00000540060 EEF1AKMT1Q8WVE0 214 aa6.77□□□□□ -1.33
LPCAT3-209ENST00000540060 SKA2Q8WVK7 121 aaPredicted RBP6.77□□□□□ -1.33
LPCAT3-209ENST00000540060 SLC44A1Q8WWI5 657 aa6.77□□□□□ -1.33
LPCAT3-209ENST00000540060 LCN9Q8WX39 176 aa6.77□□□□□ -1.33
LPCAT3-209ENST00000540060 ASB11Q8WXH4 323 aa6.77□□□□□ -1.33
LPCAT3-209ENST00000540060 NCSTNQ92542 709 aa6.77□□□□□ -1.33
LPCAT3-209ENST00000540060 UBXN4Q92575 508 aa6.77□□□□□ -1.33
LPCAT3-209ENST00000540060 GRAMD1AQ96CP6 724 aa6.77□□□□□ -1.33
LPCAT3-209ENST00000540060 LINGO1Q96FE5 620 aa6.77□□□□□ -1.33
LPCAT3-209ENST00000540060 CCDC74BQ96LY2 380 aa6.77□□□□□ -1.33
LPCAT3-209ENST00000540060 FOPNLQ96NB1 174 aa6.77□□□□□ -1.33
LPCAT3-209ENST00000540060 TMEM74Q96NL1 305 aa6.77□□□□□ -1.33
LPCAT3-209ENST00000540060 PAFAH2Q99487 392 aa6.77□□□□□ -1.33
LPCAT3-209ENST00000540060 SEMA6CQ9H3T2 930 aa6.77□□□□□ -1.33
LPCAT3-209ENST00000540060 SRMSQ9H3Y6 488 aa6.77□□□□□ -1.33
LPCAT3-209ENST00000540060 XKR8Q9H6D3 395 aa6.77□□□□□ -1.33
LPCAT3-209ENST00000540060 CAB39LQ9H9S4 337 aa6.77□□□□□ -1.33
LPCAT3-209ENST00000540060 PDP2Q9P2J9 529 aa6.77□□□□□ -1.33
LPCAT3-209ENST00000540060 EPHA6Q9UF33 1036 aa6.77□□□□□ -1.33
LPCAT3-209ENST00000540060 CIDEBQ9UHD4 219 aa6.77□□□□□ -1.33
LPCAT3-209ENST00000540060 POMT2Q9UKY4 750 aa6.77□□□□□ -1.33
LPCAT3-209ENST00000540060 PLAGL1Q9UM63 463 aa6.77□□□□□ -1.33
LPCAT3-209ENST00000540060 TDRKHQ9Y2W6 561 aaKnown RBP6.77□□□□□ -1.33
LPCAT3-209ENST00000540060 VWA7Q9Y334 891 aa6.77□□□□□ -1.33
LPCAT3-209ENST00000540060 MSRB2Q9Y3D2 182 aa6.77□□□□□ -1.33
LPCAT3-209ENST00000540060 PCM1Q15154 2024 aa6.77□□□□□ -1.33
LPCAT3-209ENST00000540060 KNTC1P50748 2209 aa6.77□□□□□ -1.33
LPCAT3-209ENST00000540060 CFAP47Q6ZTR5 3102 aa6.76□□□□□ -1.33
LPCAT3-209ENST00000540060 CCDC187A0A096LP49 1063 aa6.76□□□□□ -1.33
LPCAT3-209ENST00000540060 EXOC1LA0A1B0GW35 172 aa6.76□□□□□ -1.33
LPCAT3-209ENST00000540060 HMX2A2RU54 273 aa6.76□□□□□ -1.33
LPCAT3-209ENST00000540060 PMS2P1A4D2B8 440 aa6.76□□□□□ -1.33
LPCAT3-209ENST00000540060 OR6C74A6NCV1 312 aa6.76□□□□□ -1.33
LPCAT3-209ENST00000540060 TLCD2A6NGC4 264 aa6.76□□□□□ -1.33
LPCAT3-209ENST00000540060 GFYI3L273 518 aa6.76□□□□□ -1.33
LPCAT3-209ENST00000540060 MYO1CO00159 1063 aa6.76□□□□□ -1.33
LPCAT3-209ENST00000540060 MATN2O00339 956 aa6.76□□□□□ -1.33
LPCAT3-209ENST00000540060 BTN3A3O00478 584 aa6.76□□□□□ -1.33
LPCAT3-209ENST00000540060 RASGRF2O14827 1237 aa6.76□□□□□ -1.33
LPCAT3-209ENST00000540060 HGSO14964 777 aaPredicted RBP6.76□□□□□ -1.33
LPCAT3-209ENST00000540060 TOX3O15405 576 aaPredicted RBP6.76□□□□□ -1.33
LPCAT3-209ENST00000540060 CAPN5O15484 640 aaPredicted RBP6.76□□□□□ -1.33
LPCAT3-209ENST00000540060 PHGDHO43175 533 aaKnown RBP6.76□□□□□ -1.33
LPCAT3-209ENST00000540060 KIF1CO43896 1103 aaKnown RBP6.76□□□□□ -1.33
LPCAT3-209ENST00000540060 KDM1AO60341 852 aa6.76□□□□□ -1.33
LPCAT3-209ENST00000540060 CATP04040 527 aaKnown RBP6.76□□□□□ -1.33
LPCAT3-209ENST00000540060 ERGP11308 486 aa6.76□□□□□ -1.33
LPCAT3-209ENST00000540060 STMN1P16949 149 aa6.76□□□□□ -1.33
LPCAT3-209ENST00000540060 AMD1P17707 334 aa6.76□□□□□ -1.33
LPCAT3-209ENST00000540060 POLR2CP19387 275 aaPredicted RBP6.76□□□□□ -1.33
LPCAT3-209ENST00000540060 SAT1P21673 171 aa6.76□□□□□ -1.33
LPCAT3-209ENST00000540060 MPSTP25325 297 aa6.76□□□□□ -1.33
LPCAT3-209ENST00000540060 GCAP28676 217 aa6.76□□□□□ -1.33
LPCAT3-209ENST00000540060 PEBP1P30086 187 aaKnown RBP6.76□□□□□ -1.33
LPCAT3-209ENST00000540060 PPM1FP49593 454 aaPredicted RBP6.76□□□□□ -1.33
LPCAT3-209ENST00000540060 CSRP3P50461 194 aa6.76□□□□□ -1.33
LPCAT3-209ENST00000540060 RAB28P51157 221 aa6.76□□□□□ -1.33
LPCAT3-209ENST00000540060 IL2P60568 153 aa6.76□□□□□ -1.33
LPCAT3-209ENST00000540060 SP140Q13342 867 aa6.76□□□□□ -1.33
LPCAT3-209ENST00000540060 EIF3IQ13347 325 aaKnown RBP6.76□□□□□ -1.33
LPCAT3-209ENST00000540060 TRA2AQ13595 282 aaKnown RBP eCLIP6.76□□□□□ -1.33
LPCAT3-209ENST00000540060 BMPR2Q13873 1038 aa6.76□□□□□ -1.33
LPCAT3-209ENST00000540060 USP10Q14694 798 aaKnown RBP6.76□□□□□ -1.33
LPCAT3-209ENST00000540060 C16orf72Q14CZ0 275 aa6.76□□□□□ -1.33
LPCAT3-209ENST00000540060 UAP1Q16222 522 aaPredicted RBP6.76□□□□□ -1.33
LPCAT3-209ENST00000540060 PHF19Q5T6S3 580 aa6.76□□□□□ -1.33
LPCAT3-209ENST00000540060 IRGCQ6NXR0 463 aa6.76□□□□□ -1.33
LPCAT3-209ENST00000540060 PRSS42Q7Z5A4 293 aa6.76□□□□□ -1.33
LPCAT3-209ENST00000540060 ARHGAP22Q7Z5H3 698 aa6.76□□□□□ -1.33
LPCAT3-209ENST00000540060 CMC1Q7Z7K0 106 aa6.76□□□□□ -1.33
LPCAT3-209ENST00000540060 MYO1HQ8N1T3 1032 aa6.76□□□□□ -1.33
LPCAT3-209ENST00000540060 RCBTB1Q8NDN9 531 aa6.76□□□□□ -1.33
LPCAT3-209ENST00000540060 OR4E2Q8NGC2 313 aa6.76□□□□□ -1.33
LPCAT3-209ENST00000540060 OR2L8Q8NGY9 312 aa6.76□□□□□ -1.33
LPCAT3-209ENST00000540060 FLVCR1-AS1Q8TAF5 88 aa6.76□□□□□ -1.33
LPCAT3-209ENST00000540060 UHMK1Q8TAS1 419 aaKnown RBP6.76□□□□□ -1.33
LPCAT3-209ENST00000540060 MAGEC3Q8TD91 643 aa6.76□□□□□ -1.33
LPCAT3-209ENST00000540060 DENND1AQ8TEH3 1009 aa6.76□□□□□ -1.33
LPCAT3-209ENST00000540060 AENQ8WTP8 325 aaKnown RBP6.76□□□□□ -1.33
LPCAT3-209ENST00000540060 DCAKDQ8WVC6 231 aa6.76□□□□□ -1.33
LPCAT3-209ENST00000540060 ANKRD49Q8WVL7 239 aa6.76□□□□□ -1.33
LPCAT3-209ENST00000540060 DLG3Q92796 817 aa6.76□□□□□ -1.33
LPCAT3-209ENST00000540060 GATA6Q92908 595 aa6.76□□□□□ -1.33
LPCAT3-209ENST00000540060 ISL2Q96A47 359 aa6.76□□□□□ -1.33
LPCAT3-209ENST00000540060 RAD51AP1Q96B01 352 aa6.76□□□□□ -1.33
LPCAT3-209ENST00000540060 MRRFQ96E11 262 aaKnown RBP6.76□□□□□ -1.33
LPCAT3-209ENST00000540060 TSPAN17Q96FV3 270 aa6.76□□□□□ -1.33
LPCAT3-209ENST00000540060 PDLIM5Q96HC4 596 aaKnown RBP6.76□□□□□ -1.33
LPCAT3-209ENST00000540060 IL17FQ96PD4 163 aa6.76□□□□□ -1.33
LPCAT3-209ENST00000540060 TGM7Q96PF1 710 aa6.76□□□□□ -1.33
LPCAT3-209ENST00000540060 CD180Q99467 661 aa6.76□□□□□ -1.33
LPCAT3-209ENST00000540060 DHRS4Q9BTZ2 278 aa6.76□□□□□ -1.33
LPCAT3-209ENST00000540060 RAB11FIP5Q9BXF6 653 aa6.76□□□□□ -1.33
LPCAT3-209ENST00000540060 STRADBQ9C0K7 418 aa6.76□□□□□ -1.33
LPCAT3-209ENST00000540060 GPAMQ9HCL2 828 aa6.76□□□□□ -1.33
LPCAT3-209ENST00000540060 HRASLS2Q9NWW9 162 aa6.76□□□□□ -1.33
LPCAT3-209ENST00000540060 OR6C2Q9NZP2 312 aa6.76□□□□□ -1.33
LPCAT3-209ENST00000540060 SPATA7Q9P0W8 599 aa6.76□□□□□ -1.33
Retrieved 100 of 20,778 RNA–protein pairs in 37.8 ms