RNA–Protein interactions for RNA: ENST00000539552.1

AC055720.1-201, humanhuman

TSL 5 BASIC

Gene AC055720.1, Length 475 nt, Biotype lincRNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
AC055720.1-201ENST00000539552 CDX2Q99626 313 aaPredicted RBP3.75□□□□□ -1.81
AC055720.1-201ENST00000539552 CCT7Q99832 543 aa3.75□□□□□ -1.81
AC055720.1-201ENST00000539552 H2AFJQ9BTM1 129 aa3.75□□□□□ -1.81
AC055720.1-201ENST00000539552 VN1R3Q9BXE9 311 aa3.75□□□□□ -1.81
AC055720.1-201ENST00000539552 MMP27Q9H306 513 aa3.75□□□□□ -1.81
AC055720.1-201ENST00000539552 GOLPH3LQ9H4A5 285 aa3.75□□□□□ -1.81
AC055720.1-201ENST00000539552 NOL11Q9H8H0 719 aaKnown RBP3.75□□□□□ -1.81
AC055720.1-201ENST00000539552 CNOT10Q9H9A5 744 aaKnown RBP3.75□□□□□ -1.81
AC055720.1-201ENST00000539552 RANGRFQ9HD47 186 aaPredicted RBP3.75□□□□□ -1.81
AC055720.1-201ENST00000539552 TRIM36Q9NQ86 728 aa3.75□□□□□ -1.81
AC055720.1-201ENST00000539552 HPS4Q9NQG7 708 aa3.75□□□□□ -1.81
AC055720.1-201ENST00000539552 SLC6A13Q9NSD5 602 aa3.75□□□□□ -1.81
AC055720.1-201ENST00000539552 KIAA1456Q9P272 454 aa3.75□□□□□ -1.81
AC055720.1-201ENST00000539552 SLC25A13Q9UJS0 675 aa3.75□□□□□ -1.81
AC055720.1-201ENST00000539552 CCNL1Q9UK58 526 aaPredicted RBP3.75□□□□□ -1.81
AC055720.1-201ENST00000539552 TSPAN16Q9UKR8 245 aa3.75□□□□□ -1.81
AC055720.1-201ENST00000539552 ZNF148Q9UQR1 794 aa3.75□□□□□ -1.81
AC055720.1-201ENST00000539552 KDM3BQ7LBC6 1761 aa3.75□□□□□ -1.81
AC055720.1-201ENST00000539552 MON2Q7Z3U7 1717 aa3.75□□□□□ -1.81
AC055720.1-201ENST00000539552 MAP3K19Q56UN5 1328 aa3.74□□□□□ -1.81
AC055720.1-201ENST00000539552 RGPD5Q99666 1765 aa3.74□□□□□ -1.81
AC055720.1-201ENST00000539552 CYP3A7-CYP3A51PA0A087WV96 503 aa3.74□□□□□ -1.81
AC055720.1-201ENST00000539552 C15orf38-AP3S2A0A0A6YYH1 394 aa3.74□□□□□ -1.81
AC055720.1-201ENST00000539552 MYADML2A6NDP7 307 aa3.74□□□□□ -1.81
AC055720.1-201ENST00000539552 C3orf70A6NLC5 250 aaPredicted RBP3.74□□□□□ -1.81
AC055720.1-201ENST00000539552 E9PI62 339 aa3.74□□□□□ -1.81
AC055720.1-201ENST00000539552 M0QZQ0 153 aa3.74□□□□□ -1.81
AC055720.1-201ENST00000539552 ATP2A1O14983 1001 aa3.74□□□□□ -1.81
AC055720.1-201ENST00000539552 TRIM24O15164 1050 aa3.74□□□□□ -1.81
AC055720.1-201ENST00000539552 MAPK13O15264 365 aa3.74□□□□□ -1.81
AC055720.1-201ENST00000539552 HBP1O60381 514 aa3.74□□□□□ -1.81
AC055720.1-201ENST00000539552 MOSPD3O75425 235 aa3.74□□□□□ -1.81
AC055720.1-201ENST00000539552 SURF6O75683 361 aaKnown RBP3.74□□□□□ -1.81
AC055720.1-201ENST00000539552 CIB2O75838 187 aa3.74□□□□□ -1.81
AC055720.1-201ENST00000539552 FLOT1O75955 427 aa3.74□□□□□ -1.81
AC055720.1-201ENST00000539552 BCL10O95999 233 aa3.74□□□□□ -1.81
AC055720.1-201ENST00000539552 ALDOAP04075 364 aaKnown RBP3.74□□□□□ -1.81
AC055720.1-201ENST00000539552 CSF2P04141 144 aa3.74□□□□□ -1.81
AC055720.1-201ENST00000539552 OR52Z1P0C646 297 aa3.74□□□□□ -1.81
AC055720.1-201ENST00000539552 IRF1P10914 325 aa3.74□□□□□ -1.81
AC055720.1-201ENST00000539552 CYP4B1P13584 511 aa3.74□□□□□ -1.81
AC055720.1-201ENST00000539552 PKMP14618 531 aaKnown RBP3.74□□□□□ -1.81
AC055720.1-201ENST00000539552 NR1D1P20393 614 aa3.74□□□□□ -1.81
AC055720.1-201ENST00000539552 GCSHP23434 173 aa3.74□□□□□ -1.81
AC055720.1-201ENST00000539552 CYP3A7P24462 503 aa3.74□□□□□ -1.81
AC055720.1-201ENST00000539552 POU1F1P28069 291 aa3.74□□□□□ -1.81
AC055720.1-201ENST00000539552 TIA1P31483 386 aaKnown RBP eCLIP3.74□□□□□ -1.81
AC055720.1-201ENST00000539552 CDAP32320 146 aa3.74□□□□□ -1.81
AC055720.1-201ENST00000539552 GJC1P36383 396 aa3.74□□□□□ -1.81
AC055720.1-201ENST00000539552 GNAQP50148 359 aa3.74□□□□□ -1.81
AC055720.1-201ENST00000539552 ANXA11P50995 505 aaKnown RBP3.74□□□□□ -1.81
AC055720.1-201ENST00000539552 ARSEP51690 589 aa3.74□□□□□ -1.81
AC055720.1-201ENST00000539552 ZNF134P52741 427 aa3.74□□□□□ -1.81
AC055720.1-201ENST00000539552 AP3M2P53677 418 aa3.74□□□□□ -1.81
AC055720.1-201ENST00000539552 ATP5IP56385 69 aaPredicted RBP3.74□□□□□ -1.81
AC055720.1-201ENST00000539552 SUMO2P61956 95 aaKnown RBP3.74□□□□□ -1.81
AC055720.1-201ENST00000539552 TNFRSF17Q02223 184 aa3.74□□□□□ -1.81
AC055720.1-201ENST00000539552 RBPJQ06330 500 aa3.74□□□□□ -1.81
AC055720.1-201ENST00000539552 MTAPQ13126 283 aa3.74□□□□□ -1.81
AC055720.1-201ENST00000539552 ALKBH1Q13686 389 aaKnown RBP3.74□□□□□ -1.81
AC055720.1-201ENST00000539552 PTPRCAPQ14761 206 aa3.74□□□□□ -1.81
AC055720.1-201ENST00000539552 HLXQ14774 488 aaPredicted RBP3.74□□□□□ -1.81
AC055720.1-201ENST00000539552 ARHGAP19Q14CB8 494 aa3.74□□□□□ -1.81
AC055720.1-201ENST00000539552 ARHGEF6Q15052 776 aa3.74□□□□□ -1.81
AC055720.1-201ENST00000539552 RCN1Q15293 331 aa3.74□□□□□ -1.81
AC055720.1-201ENST00000539552 ELAVL1Q15717 326 aaKnown RBP3.74□□□□□ -1.81
AC055720.1-201ENST00000539552 CCDC152Q4G0S7 254 aa3.74□□□□□ -1.81
AC055720.1-201ENST00000539552 MCMDC2Q4G0Z9 681 aa3.74□□□□□ -1.81
AC055720.1-201ENST00000539552 TAF1BQ53T94 588 aaPredicted RBP3.74□□□□□ -1.81
AC055720.1-201ENST00000539552 LY6G5CQ5SRR4 150 aa3.74□□□□□ -1.81
AC055720.1-201ENST00000539552 RARS2Q5T160 578 aaKnown RBP3.74□□□□□ -1.81
AC055720.1-201ENST00000539552 TEDDM1Q5T9Z0 273 aa3.74□□□□□ -1.81
AC055720.1-201ENST00000539552 RNASEH2BQ5TBB1 312 aaKnown RBP3.74□□□□□ -1.81
AC055720.1-201ENST00000539552 PRAMEF8Q5VWM4 474 aa3.74□□□□□ -1.81
AC055720.1-201ENST00000539552 TXNDC8Q6A555 127 aa3.74□□□□□ -1.81
AC055720.1-201ENST00000539552 DHRS7BQ6IAN0 325 aaPredicted RBP3.74□□□□□ -1.81
AC055720.1-201ENST00000539552 OR6B2Q6IFH4 312 aa3.74□□□□□ -1.81
AC055720.1-201ENST00000539552 TMEM88Q6PEY1 159 aa3.74□□□□□ -1.81
AC055720.1-201ENST00000539552 BRAT1Q6PJG6 821 aa3.74□□□□□ -1.81
AC055720.1-201ENST00000539552 MACC1Q6ZN28 852 aa3.74□□□□□ -1.81
AC055720.1-201ENST00000539552 PRSS42Q7Z5A4 293 aa3.74□□□□□ -1.81
AC055720.1-201ENST00000539552 WDR5BQ86VZ2 330 aa3.74□□□□□ -1.81
AC055720.1-201ENST00000539552 SLC22A9Q8IVM8 553 aa3.74□□□□□ -1.81
AC055720.1-201ENST00000539552 CCDC83Q8IWF9 413 aa3.74□□□□□ -1.81
AC055720.1-201ENST00000539552 C4orf19Q8IY42 314 aa3.74□□□□□ -1.81
AC055720.1-201ENST00000539552 HACE1Q8IYU2 909 aa3.74□□□□□ -1.81
AC055720.1-201ENST00000539552 IZUMO1Q8IYV9 350 aa3.74□□□□□ -1.81
AC055720.1-201ENST00000539552 TTC5Q8N0Z6 440 aa3.74□□□□□ -1.81
AC055720.1-201ENST00000539552 CPXM2Q8N436 756 aa3.74□□□□□ -1.81
AC055720.1-201ENST00000539552 ZNF321PQ8N8H1 164 aa3.74□□□□□ -1.81
AC055720.1-201ENST00000539552 RASGEF1AQ8N9B8 481 aa3.74□□□□□ -1.81
AC055720.1-201ENST00000539552 BEND2Q8NDZ0 799 aa3.74□□□□□ -1.81
AC055720.1-201ENST00000539552 SRFBP1Q8NEF9 429 aaKnown RBP3.74□□□□□ -1.81
AC055720.1-201ENST00000539552 LILRB4Q8NHJ6 448 aa3.74□□□□□ -1.81
AC055720.1-201ENST00000539552 NCOA7Q8NI08 942 aa3.74□□□□□ -1.81
AC055720.1-201ENST00000539552 PEX13Q92968 403 aa3.74□□□□□ -1.81
AC055720.1-201ENST00000539552 MOAP1Q96BY2 351 aa3.74□□□□□ -1.81
AC055720.1-201ENST00000539552 DTD2Q96FN9 168 aa3.74□□□□□ -1.81
AC055720.1-201ENST00000539552 SLC41A2Q96JW4 573 aa3.74□□□□□ -1.81
AC055720.1-201ENST00000539552 NUDCD1Q96RS6 583 aa3.74□□□□□ -1.81
Retrieved 100 of 20,778 RNA–protein pairs in 19.9 ms